Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2772 Erigeron canadensis HOM05D004329 ORTHO05D005516 0.0e+00 1154.8 596 100.0
Lsat_1_v5_gn_4_84600 Lactuca sativa HOM05D004329 ORTHO05D005516 1.1e-299 1032.7 597 89.1
HanXRQChr09g0273891 Helianthus annuus HOM05D004329 ORTHO05D005516 9.3e-299 1029.6 596 89.1
Hma1.2p1_0493F.1_g164990 Hydrangea macrophylla HOM05D004329 ORTHO05D005516 1.5e-277 959.1 597 81.4
Dinv23217 Davidia involucrata HOM05D004329 ORTHO05D005516 7.2e-275 950.3 599 80.0
Rhsim08G0196600 Rhododendron simsii HOM05D004329 ORTHO05D005516 8.8e-273 943.3 597 80.6
CSS0022050 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 3.3e-272 941.4 597 80.6
vmacro19178 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 4.4e-272 941.0 597 79.9
Actinidia18306 Actinidia chinensis HOM05D004329 ORTHO05D005516 7.7e-269 930.2 598 78.8
Duzib205G0720 Durio zibethinus HOM05D004329 ORTHO05D005516 3.2e-267 924.9 595 77.6
Nitab4.5_0007718g0050 Nicotiana tabacum HOM05D004329 ORTHO05D005516 5.5e-267 924.1 599 78.1
vmacro06162 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 5.5e-267 924.1 597 78.9
Cfa018712 Carpinus fangiana HOM05D004329 ORTHO05D005516 1.6e-266 922.5 598 78.9
Thecc.03G139600 Theobroma cacao HOM05D004329 ORTHO05D005516 3.6e-266 921.4 595 78.0
Atru.chr6.1908 Acer truncatum HOM05D004329 ORTHO05D005516 8.0e-266 920.2 595 78.5
Sopen03g024820 Solanum pennellii HOM05D004329 ORTHO05D005516 1.4e-265 919.5 598 77.6
CANSAT80G0883 Cannabis sativa HOM05D004329 ORTHO05D005516 2.0e-264 915.6 591 77.7
Actinidia36840 Actinidia chinensis HOM05D004329 ORTHO05D005516 2.6e-264 915.2 598 77.9
Solyc03g093970.3 Solanum lycopersicum HOM05D004329 ORTHO05D005516 3.3e-264 914.8 598 77.4
Sopen02g013850 Solanum pennellii HOM05D004329 ORTHO05D005516 4.4e-264 914.4 596 77.5
Gohir.D07G051400 Gossypium hirsutum HOM05D004329 ORTHO05D005516 5.7e-264 914.1 597 77.4
Solyc02g062810.4 Solanum lycopersicum HOM05D004329 ORTHO05D005516 7.4e-264 913.7 596 77.3
Peaxi162Scf00935g00018 Petunia axillaris HOM05D004329 ORTHO05D005516 1.3e-263 912.9 591 78.5
MSTRG.22850 Avicennia marina HOM05D004329 ORTHO05D005516 2.8e-263 911.8 602 77.6
Haze_07104 Corylus avellana HOM05D004329 ORTHO05D005516 8.2e-263 910.2 622 75.9
CAN.G1210.1 Capsicum annuum HOM05D004329 ORTHO05D005516 2.4e-262 908.7 598 76.9
CANSAT80G0741 Cannabis sativa HOM05D004329 ORTHO05D005516 3.1e-262 908.3 592 77.4
Gorai.001G054500 Gossypium raimondii HOM05D004329 ORTHO05D005516 4.1e-262 907.9 611 75.8
Lj5A87T69 Lonicera japonica HOM05D004329 ORTHO05D005516 4.1e-262 907.9 576 79.7
QL10p000650 Quercus lobata HOM05D004329 ORTHO05D005516 2.6e-261 905.2 589 78.1
Ciclev10031005m.g Citrus clementina HOM05D004329 ORTHO05D005516 3.5e-261 904.8 596 77.2
TAR374G0799 Trochodendron aralioides HOM05D004329 ORTHO05D005516 3.5e-261 904.8 596 76.3
Gohir.A07G047200 Gossypium hirsutum HOM05D004329 ORTHO05D005516 4.5e-261 904.4 603 76.3
Migut.I00617 Erythranthe guttata HOM05D004329 ORTHO05D005516 3.8e-260 901.4 596 76.2
Prupe.5G142700 Prunus persica HOM05D004329 ORTHO05D005516 1.1e-259 899.8 595 76.3
Oeu012844.2 Olea europaea HOM05D004329 ORTHO05D005516 2.5e-259 898.7 652 72.1
SGA_v2.0_scaffold74G24730 Striga asiatica HOM05D004329 ORTHO05D005516 2.5e-259 898.7 615 74.8
TWI39G0623 Tripterygium wilfordii HOM05D004329 ORTHO05D005516 2.7e-258 895.2 595 75.8
GSVIVG01008641001 Vitis vinifera HOM05D004329 ORTHO05D005516 6.1e-258 894.0 593 76.6
MD14G1148000 Malus domestica HOM05D004329 ORTHO05D005516 8.0e-258 893.6 596 76.5
Nn4g22142 Nelumbo nucifera HOM05D004329 ORTHO05D005516 3.0e-257 891.7 594 74.9
Sc22g0003470 Simmondsia chinensis HOM05D004329 ORTHO05D005516 4.0e-257 891.3 595 75.3
Potri.012G106200 Populus trichocarpa HOM05D004329 ORTHO05D005516 1.2e-256 889.8 597 75.4
ClCG03G012650 Citrullus lanatus HOM05D004329 ORTHO05D005516 1.5e-256 889.4 596 74.8
MD06G1131700 Malus domestica HOM05D004329 ORTHO05D005516 1.5e-256 889.4 594 76.3
Dinv13728 Davidia involucrata HOM05D004329 ORTHO05D005516 2.6e-256 888.6 566 80.0
Potri.015G105600 Populus trichocarpa HOM05D004329 ORTHO05D005516 3.3e-256 888.3 594 75.6
Sed0023904 Sechium edule HOM05D004329 ORTHO05D005516 5.7e-256 887.5 597 75.9
CsaV3_1G043340 Cucumis sativus L. HOM05D004329 ORTHO05D005516 7.5e-256 887.1 596 74.5
EL10Ac7g17942 Beta vulgaris HOM05D004329 ORTHO05D005516 1.1e-254 883.2 591 76.0
Lj4g0026438 Lotus japonicus HOM05D004329 ORTHO05D005516 2.4e-254 882.1 599 74.6
Aqoxy4G00231 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 3.1e-254 881.7 591 74.8
TPR.G12807 Trifolium pratense HOM05D004329 ORTHO05D005516 3.1e-254 881.7 599 74.6
Sed0013101 Sechium edule HOM05D004329 ORTHO05D005516 4.1e-254 881.3 596 74.7
MELO3C015126.2 Cucumis melo HOM05D004329 ORTHO05D005516 4.5e-253 877.9 596 73.7
Eucgr.F03808 Eucalyptus grandis HOM05D004329 ORTHO05D005516 1.7e-252 875.9 590 75.1
Ca_16811_v3 Cicer arietinum L. HOM05D004329 ORTHO05D005516 2.2e-252 875.5 599 74.0
Manes.06G126200 Manihot esculenta HOM05D004329 ORTHO05D005516 1.9e-251 872.5 596 74.0
Psat7g039240 Pisum sativum HOM05D004329 ORTHO05D005516 3.2e-251 871.7 599 73.5
PGR083G0006 Punica granatum HOM05D004329 ORTHO05D005516 3.2e-251 871.7 590 74.9
Lalb_Chr07g0183781 Lupinus albus HOM05D004329 ORTHO05D005516 4.2e-251 871.3 596 74.3
RcHm_v2.0_Chr7g0188791 Rosa chinensis HOM05D004329 ORTHO05D005516 4.2e-251 871.3 593 75.4
Glyma.05G200600 Glycine max HOM05D004329 ORTHO05D005516 5.5e-251 870.9 598 73.9
Medtr8g100110 Medicago truncatula HOM05D004329 ORTHO05D005516 9.4e-251 870.2 598 73.7
VMungo0251G1423 Vigna mungo HOM05D004329 ORTHO05D005516 2.1e-250 869.0 603 73.1
CiPaw.09G139600 Carya illinoinensis HOM05D004329 ORTHO05D005516 6.1e-250 867.5 567 76.5
Phvul.002G282000 Phaseolus vulgaris HOM05D004329 ORTHO05D005516 1.8e-249 865.9 603 72.6
Sabra15G0125900 Salix brachista HOM05D004329 ORTHO05D005516 1.8e-249 865.9 625 71.4
Actinidia08906 Actinidia chinensis HOM05D000877 ORTHO05D001509 3.0e-249 865.1 551 78.9
FAN18G1836 Fragaria x ananassa HOM05D004329 ORTHO05D005516 3.0e-249 865.1 594 75.8
FvH4_5g09400 Fragaria vesca HOM05D004329 ORTHO05D005516 6.8e-249 864.0 594 75.8
COL.COLO4_37247 Corchorus olitorius HOM05D004329 ORTHO05D005516 2.6e-248 862.1 615 72.2
FAN13G1968 Fragaria x ananassa HOM05D004329 ORTHO05D005516 4.4e-248 861.3 608 74.0
Aa31LG11G1550 Aethionema arabicum HOM05D004329 ORTHO05D005516 1.8e-246 855.9 598 72.1
THA.LOC104823903 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 2.4e-246 855.5 596 72.5
AL8G38730 Arabidopsis lyrata HOM05D004329 ORTHO05D005516 2.7e-245 852.0 600 71.3
Thhalv10003854m.g Eutrema salsugineum HOM05D004329 ORTHO05D005516 5.9e-245 850.9 599 71.6
arahy.Tifrunner.gnm1.ann1.IBL9WM Arachis hypogaea HOM05D004329 ORTHO05D005516 1.3e-244 849.7 592 72.6
THA.LOC104819422 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 1.3e-244 849.7 596 71.5
DCAR_016350 Daucus carota HOM05D004329 ORTHO05D005516 8.6e-244 847.0 550 77.8
arahy.Tifrunner.gnm1.ann1.HJ5J7F Arachis hypogaea HOM05D004329 ORTHO05D005516 2.5e-243 845.5 589 72.7
Sp2g25150 Schrenkiella parvula HOM05D004329 ORTHO05D005516 9.5e-243 843.6 597 71.0
Sabra12G0078600 Salix brachista HOM05D004329 ORTHO05D005516 1.2e-242 843.2 678 66.4
AT5G61970 Arabidopsis thaliana HOM05D004329 ORTHO05D005516 2.1e-242 842.4 601 70.9
BraA02t09122Z Brassica rapa HOM05D004329 ORTHO05D005516 1.0e-241 840.1 595 70.3
ATR1096G004 Amborella trichopoda HOM05D004329 ORTHO05D005516 1.4e-241 839.7 595 70.1
BcaB02g09609 Brassica carinata HOM05D004329 ORTHO05D005516 2.3e-241 839.0 597 70.2
BolC2t12235H Brassica oleracea HOM05D004329 ORTHO05D005516 6.8e-241 837.4 591 70.4
BcaC01g02451 Brassica carinata HOM05D004329 ORTHO05D005516 3.4e-240 835.1 597 69.7
A06p28670 Brassica napus HOM05D004329 ORTHO05D005516 3.4e-240 835.1 597 69.7
C03p65130 Brassica napus HOM05D004329 ORTHO05D005516 3.4e-240 835.1 597 69.7
BolC3t18767H Brassica oleracea HOM05D004329 ORTHO05D005516 3.4e-240 835.1 597 69.7
BraA06t25807Z Brassica rapa HOM05D004329 ORTHO05D005516 7.5e-240 833.9 597 69.5
Carub.0008s2266 Capsella rubella HOM05D004329 ORTHO05D005516 7.5e-240 833.9 598 70.2
SGA_v2.0_scaffold40G15626 Striga asiatica HOM05D004329 ORTHO05D005516 8.3e-239 830.5 613 70.8
Hund02504 Selenicereus undatus HOM05D004329 ORTHO05D005516 1.1e-238 830.1 578 72.8
FAN04G0329 Fragaria x ananassa HOM05D004329 ORTHO05D005516 1.6e-237 826.2 591 73.8
PSO017G7154 Papaver somniferum HOM05D004329 ORTHO05D005516 2.7e-237 825.5 591 70.7
Carub.0005s0295 Capsella rubella HOM05D004329 ORTHO05D005516 4.5e-237 824.7 597 69.7
PSO478G2811 Papaver somniferum HOM05D004329 ORTHO05D005516 1.1e-235 820.1 591 70.2
FAN08G1859 Fragaria x ananassa HOM05D004329 ORTHO05D005516 2.5e-235 818.9 564 75.4
Glyma.08G008000 Glycine max HOM05D004329 ORTHO05D005516 4.7e-234 814.7 556 74.5
Cpa.g.sc13.162 Carica papaya HOM05D004329 ORTHO05D005516 1.8e-233 812.8 597 71.2
SalBow1G7365 Salvia bowleyana HOM05D004329 ORTHO05D005516 5.8e-232 807.7 637 67.8
BcaB07g29807 Brassica carinata HOM05D004329 ORTHO05D005516 2.4e-230 802.4 616 66.2
AUR62009528 Chenopodium quinoa HOM05D004329 ORTHO05D005516 5.6e-227 791.2 583 70.8
AUR62041693 Chenopodium quinoa HOM05D004329 ORTHO05D005516 5.6e-227 791.2 583 70.8
unitig_32.g11043 Utricularia gibba HOM05D004329 ORTHO05D005516 1.4e-225 786.6 648 63.0
PGSC0003DMG400015501 Solanum tuberosum HOM05D004329 ORTHO05D005516 3.0e-220 768.8 496 77.6
PSO081G0143 Papaver somniferum HOM05D004329 ORTHO05D005516 2.6e-216 755.7 591 66.5
SEGI_15405 Sequoiadendron giganteum HOM05D004329 ORTHO05D005516 1.3e-215 753.4 598 64.2
MBI13_g15007_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 3.7e-215 751.9 502 74.3
Zm00001eb327290 Zea mays HOM05D004329 ORTHO05D005516 1.2e-213 746.9 593 63.7
Manes.14G045200 Manihot esculenta HOM05D004329 ORTHO05D005516 5.8e-208 728.0 475 77.5
CDE04G3457 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 8.4e-207 724.2 598 64.2
CARHR275760 Cardamine hirsuta HOM05D004329 ORTHO05D005516 4.0e-201 705.3 474 75.1
AUR62044173 Chenopodium quinoa HOM05D004329 ORTHO05D005516 3.2e-190 669.1 543 66.3
Cc09_g07950 Coffea canephora HOM05D004329 ORTHO05D005516 1.3e-183 647.1 440 75.0
C02p61780 Brassica napus HOM05D004329 ORTHO05D005516 1.8e-180 636.7 424 75.0
MBI13_g43178_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 1.8e-180 636.7 502 65.7
AagrBONN_evm.TU.Sc2ySwM_228.1186 Anthoceros agrestis HOM05D004329 ORTHO05D005516 7.6e-176 621.3 586 54.9
Mapoly0153s0017 Marchantia polymorpha HOM05D004329 ORTHO05D005516 1.5e-168 597.0 594 51.7
Pp3c15_22190 Physcomitrium patens HOM05D004329 ORTHO05D005516 1.7e-167 593.6 570 52.8
Os08g0323000 Oryza sativa ssp. japonica HOM05D004329 ORTHO05D005516 7.4e-155 551.6 438 63.7
Ah.11g046840 Amaranthus hybridus HOM05D004329 ORTHO05D005516 1.2e-144 517.7 325 80.6
CBR_g20988 Chara braunii HOM05D004329 ORTHO05D005516 9.4e-142 508.1 619 46.2
A02p41850 Brassica napus HOM05D004329 ORTHO05D005516 1.2e-133 481.1 365 66.6
SMO356G0738 Selaginella moellendorffii HOM05D004329 ORTHO05D005516 1.4e-132 477.6 574 44.8
HPP92_028710 Vanilla planifolia HOM05D004329 ORTHO05D005516 2.3e-132 476.9 417 60.0
Nitab4.5_0009429g0030 Nicotiana tabacum HOM05D004329 ORTHO05D005516 1.4e-129 467.6 283 83.4
Nitab4.5_0017885g0010 Nicotiana tabacum HOM05D004329 ORTHO05D005516 4.0e-124 449.5 316 71.8
FAN18G2676 Fragaria x ananassa HOM05D004329 ORTHO05D005516 1.2e-120 438.0 521 51.4
Cc00_g30130 Coffea canephora HOM05D004329 ORTHO05D005516 1.9e-110 404.1 280 74.6
CDE07G0688 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 3.1e-108 396.7 243 80.7
Aqoxy5G01090 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 2.3e-100 370.5 441 48.3
TAR622G0210 Trochodendron aralioides HOM05D004329 ORTHO05D005516 1.6e-88 331.3 316 57.0
CDE07G1247 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 1.1e-86 325.1 273 63.7
MCO15G338 Micromonas commoda HOM05D004329 ORTHO05D005516 5.4e-73 279.6 545 35.6
Cre06.g267100 Chlamydomonas reinhardtii HOM05D004329 ORTHO05D005516 1.6e-72 278.1 673 31.4
MBI13_g13130_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 5.3e-68 263.1 174 77.6
Cc09_g07980 Coffea canephora HOM05D004329 ORTHO05D005516 1.8e-60 238.0 145 81.4
Cc09_g07990 Coffea canephora HOM05D004329 ORTHO05D005516 3.1e-60 237.3 143 81.8
BcaC03g18112 Brassica carinata HOM05D004329 ORTHO05D005516 5.5e-57 226.5 150 75.3
CSS0034501 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 1.4e-44 185.3 101 89.1
CSS0009974 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 5.3e-44 183.3 107 84.1
PRCOL_00003443 Prasinoderma coloniale HOM05D004329 ORTHO05D005516 2.5e-41 174.5 620 26.9
Solyc02g062830.2 Solanum lycopersicum HOM05D004329 ORTHO05D005516 6.5e-34 149.8 96 76.0
AagrBONN_evm.TU.Sc2ySwM_228.1281 Anthoceros agrestis HOM05D004329 ORTHO05D005516 1.3e-29 135.6 120 53.3
AagrBONN_evm.TU.Sc2ySwM_228.1280 Anthoceros agrestis HOM05D004329 ORTHO05D005516 1.7e-29 135.2 186 43.0
Lsat_1_v5_gn_2_122301 Lactuca sativa HOM05D009063 ORTHO05D011082 2.5e-25 121.3 210 41.0
C02p61790 Brassica napus HOM05D004329 ORTHO05D005516 1.8e-23 115.2 97 54.6
CARHR275770 Cardamine hirsuta HOM05D004329 ORTHO05D005516 6.8e-23 113.2 97 53.6
Solyc02g062840.1 Solanum lycopersicum HOM05D004329 ORTHO05D005516 7.5e-22 109.8 66 78.8
Haze_22596 Corylus avellana HOM05D004329 ORTHO05D010424 1.6e-19 102.1 71 66.2
Zm00001eb081410 Zea mays HOM05D004902 ORTHO05D006603 1.1e-17 95.9 78 56.4
CAN.G865.5 Capsicum annuum HOM05D004329 ORTHO05D005516 4.7e-16 90.5 69 58.0
Lsat_1_v5_gn_5_81961 Lactuca sativa HOM05D004329 ORTHO05D005516 8.0e-16 89.7 55 81.8
Cfa027290 Carpinus fangiana HOM05D004329 ORTHO05D121551 1.4e-15 89.0 627 22.6
Lsat_1_v5_gn_8_114301 Lactuca sativa HOM05D004329 ORTHO05D005516 4.0e-15 87.4 55 80.0
Zm00001eb202340 Zea mays HOM05D004329 ORTHO05D005516 2.4e-12 78.2 71 49.3
CSS0048280 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 2.0e-11 75.1 94 46.8
Sopen02g013860 Solanum pennellii HOM05D004329 ORTHO05D026010 1.1e-09 69.3 54 66.7
Hund31053 Selenicereus undatus HOM05D004329 ORTHO05D026010 2.3e-07 61.6 44 70.5
Hund31064 Selenicereus undatus HOM05D004329 ORTHO05D026010 2.3e-07 61.6 44 70.5
Solyc04g048930.1 Solanum lycopersicum HOM05D004329 ORTHO05D026010 5.2e-07 60.5 49 61.2


User provided reference genes

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