Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib168G0912 Durio zibethinus HOM05D005445 ORTHO05D007043 1.4e-187 659.4 336 100.0
Thecc.09G196900 Theobroma cacao HOM05D005445 ORTHO05D007043 3.0e-153 545.4 336 84.2
Gohir.A08G017100 Gossypium hirsutum HOM05D005445 ORTHO05D007043 2.2e-148 529.3 336 82.4
Gohir.D08G027500 Gossypium hirsutum HOM05D005445 ORTHO05D007043 7.2e-147 524.2 336 81.8
Gorai.004G024500 Gossypium raimondii HOM05D005445 ORTHO05D007043 6.7e-145 517.7 341 80.6
Glyma.08G027200 Glycine max HOM05D005445 ORTHO05D007043 7.4e-136 487.6 336 74.7
Cpa.g.sc115.19 Carica papaya HOM05D005445 ORTHO05D007043 1.1e-134 483.8 325 75.7
QL11p008649 Quercus lobata HOM05D005445 ORTHO05D007043 3.1e-134 482.3 364 69.2
Ciclev10008923m.g Citrus clementina HOM05D005445 ORTHO05D007043 9.1e-134 480.7 336 74.1
Atru.chr7.1013 Acer truncatum HOM05D005445 ORTHO05D007043 1.3e-132 476.9 336 74.7
Prupe.1G063800 Prunus persica HOM05D005445 ORTHO05D007043 1.1e-131 473.8 336 72.9
Glyma.05G220700 Glycine max HOM05D005445 ORTHO05D007043 2.1e-130 469.5 336 72.6
CiPaw.15G161100 Carya illinoinensis HOM05D005445 ORTHO05D007043 3.9e-129 465.3 336 71.1
Dinv12613 Davidia involucrata HOM05D005445 ORTHO05D007043 3.9e-129 465.3 336 72.0
GSVIVG01032266001 Vitis vinifera HOM05D005445 ORTHO05D007043 5.2e-129 464.9 336 71.7
Manes.02G221800 Manihot esculenta HOM05D005445 ORTHO05D007043 1.5e-128 463.4 319 76.2
Duzib170G0675 Durio zibethinus HOM05D005445 ORTHO05D007043 1.3e-127 460.3 336 73.5
VMungo0251G0086 Vigna mungo HOM05D005445 ORTHO05D007043 1.7e-127 459.9 336 71.7
CANSAT80G1260 Cannabis sativa HOM05D005445 ORTHO05D007043 4.8e-127 458.4 336 72.3
arahy.Tifrunner.gnm1.ann1.HNJF4G Arachis hypogaea HOM05D005445 ORTHO05D007043 6.3e-127 458.0 336 71.4
Ca_17431_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 8.2e-127 457.6 337 71.5
Ca_17440_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 8.2e-127 457.6 337 71.5
Lj4g0004845 Lotus japonicus HOM05D005445 ORTHO05D007043 1.1e-126 457.2 334 72.8
TWI63G1185 Tripterygium wilfordii HOM05D005445 ORTHO05D007043 1.4e-126 456.8 336 73.2
RcHm_v2.0_Chr4g0397601 Rosa chinensis HOM05D005445 ORTHO05D007043 3.1e-126 455.7 337 71.5
MD16G1238000 Malus domestica HOM05D005445 ORTHO05D007043 5.3e-126 454.9 336 70.2
Psat7g020920 Pisum sativum HOM05D005445 ORTHO05D007043 1.2e-125 453.8 337 71.8
Medtr8g101230 Medicago truncatula HOM05D005445 ORTHO05D007043 1.6e-125 453.4 337 72.1
Hma1.2p1_0314F.1_g122070 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 5.9e-125 451.4 336 69.9
Actinidia07565 Actinidia chinensis HOM05D005445 ORTHO05D007043 1.0e-124 450.7 336 69.9
FvH4_4g06040 Fragaria vesca HOM05D005445 ORTHO05D007043 1.3e-124 450.3 336 70.8
TPR.G25470 Trifolium pratense HOM05D005445 ORTHO05D007043 1.3e-124 450.3 335 71.6
Phvul.002G302400 Phaseolus vulgaris HOM05D005445 ORTHO05D007043 5.0e-124 448.4 336 72.0
arahy.Tifrunner.gnm1.ann1.K4ERET Arachis hypogaea HOM05D005445 ORTHO05D007043 1.5e-123 446.8 343 70.0
CSS0000968 Camellia sinensis var. sinensis HOM05D005445 ORTHO05D007043 1.5e-123 446.8 336 69.3
Cfa020755 Carpinus fangiana HOM05D005445 ORTHO05D007043 1.9e-123 446.4 319 73.4
Lalb_Chr09g0332001 Lupinus albus HOM05D005445 ORTHO05D007043 1.9e-123 446.4 335 69.9
FAN17G2613 Fragaria x ananassa HOM05D005445 ORTHO05D007043 9.4e-123 444.1 336 69.9
TAR383G0382 Trochodendron aralioides HOM05D005445 ORTHO05D007043 3.6e-122 442.2 341 68.0
Solyc07g017400.3 Solanum lycopersicum HOM05D005445 ORTHO05D007043 6.7e-121 438.0 333 67.3
CiPaw.16G104300 Carya illinoinensis HOM05D005445 ORTHO05D007043 3.3e-120 435.6 337 68.8
TAR383G1024 Trochodendron aralioides HOM05D005445 ORTHO05D007043 1.7e-119 433.3 328 68.9
Sopen07g006100 Solanum pennellii HOM05D005445 ORTHO05D007043 2.8e-119 432.6 333 66.7
Sabra06G0059700 Salix brachista HOM05D005445 ORTHO05D007043 2.4e-118 429.5 338 68.6
Nn8g41135 Nelumbo nucifera HOM05D005445 ORTHO05D007043 7.0e-118 427.9 340 67.1
MELO3C003927.2 Cucumis melo HOM05D005445 ORTHO05D007043 1.0e-116 424.1 334 68.6
Rhsim04G0099700 Rhododendron simsii HOM05D005445 ORTHO05D007043 1.0e-116 424.1 333 65.2
Aqoxy7G02630 Aquilegia oxysepala HOM05D005445 ORTHO05D007043 1.7e-116 423.3 331 66.8
Nitab4.5_0000899g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 6.5e-116 421.4 322 67.1
CAN.G146.2 Capsicum annuum HOM05D005445 ORTHO05D007043 1.9e-115 419.9 333 64.6
Nitab4.5_0004036g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 1.9e-115 419.9 318 67.6
DCAR_020460 Daucus carota HOM05D005445 ORTHO05D007043 9.4e-115 417.5 336 65.2
CsaV3_2G009110 Cucumis sativus L. HOM05D005445 ORTHO05D007043 1.2e-114 417.2 335 68.1
FAN07G1413 Fragaria x ananassa HOM05D005445 ORTHO05D007043 1.6e-114 416.8 336 67.3
Potri.006G078800 Populus trichocarpa HOM05D005445 ORTHO05D007043 4.7e-114 415.2 335 66.3
ClCG11G011350 Citrullus lanatus HOM05D005445 ORTHO05D007043 1.5e-112 410.2 335 67.8
MSTRG.26517 Avicennia marina HOM05D005445 ORTHO05D007043 7.5e-112 407.9 337 64.7
MBI13_g31572_MAGBIO Magnolia biondii HOM05D005445 ORTHO05D007043 7.5e-112 407.9 329 65.7
THA.LOC104815270 Tarenaya hassleriana HOM05D005445 ORTHO05D007043 8.3e-111 404.4 302 69.5
ECA234G2663 Erigeron canadensis HOM05D005445 ORTHO05D007043 1.8e-110 403.3 336 63.7
AT2G26590 Arabidopsis thaliana HOM05D005445 ORTHO05D007043 2.4e-110 402.9 306 69.0
Cc00_g00070 Coffea canephora HOM05D005445 ORTHO05D007043 2.4e-110 402.9 336 62.8
Sed0003073 Sechium edule HOM05D005445 ORTHO05D007043 3.1e-110 402.5 312 69.6
SGA_v2.0_scaffold485G52365 Striga asiatica HOM05D005445 ORTHO05D007043 4.1e-110 402.1 336 64.0
Hund03231 Selenicereus undatus HOM05D005445 ORTHO05D007043 1.2e-109 400.6 335 63.3
Oeu028820.1 Olea europaea HOM05D005445 ORTHO05D007043 2.7e-109 399.4 313 65.8
Eucgr.C00062 Eucalyptus grandis HOM05D005445 ORTHO05D007043 3.5e-109 399.1 325 65.8
HPP92_028347 Vanilla planifolia HOM05D005445 ORTHO05D007043 4.5e-109 398.7 339 60.5
Sp4g09300 Schrenkiella parvula HOM05D005445 ORTHO05D007043 1.3e-108 397.1 307 67.1
AL4G19530 Arabidopsis lyrata HOM05D005445 ORTHO05D007043 1.1e-107 394.0 305 67.2
BcaB01g03027 Brassica carinata HOM05D005445 ORTHO05D007043 1.1e-107 394.0 306 67.0
BraA03t11899Z Brassica rapa HOM05D005445 ORTHO05D007043 1.9e-107 393.3 309 66.3
BcaC01g04909 Brassica carinata HOM05D005445 ORTHO05D007043 4.2e-107 392.1 306 66.7
C03p32210 Brassica napus HOM05D005445 ORTHO05D007043 1.6e-106 390.2 306 66.7
BolC3t15563H Brassica oleracea HOM05D005445 ORTHO05D007043 2.8e-106 389.4 309 66.0
CDE06G0990 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 2.8e-106 389.4 333 62.2
PGR142G0598 Punica granatum HOM05D005445 ORTHO05D007043 2.8e-106 389.4 321 67.0
CARHR118490 Cardamine hirsuta HOM05D005445 ORTHO05D007043 4.7e-106 388.7 307 65.5
Thhalv10016855m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 8.0e-106 387.9 313 66.8
Thhalv10000977m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 1.4e-105 387.1 302 68.5
SalBow5G4362 Salvia bowleyana HOM05D005445 ORTHO05D007043 4.0e-105 385.6 339 61.7
Carub.0004s0844 Capsella rubella HOM05D005445 ORTHO05D007043 4.4e-104 382.1 306 64.7
ATR0626G233 Amborella trichopoda HOM05D005445 ORTHO05D007043 2.2e-103 379.8 341 59.8
HanXRQChr10g0309531 Helianthus annuus HOM05D005445 ORTHO05D007043 2.2e-103 379.8 313 64.2
A03p26880 Brassica napus HOM05D005445 ORTHO05D007043 6.3e-103 378.3 309 64.7
Lsat_1_v5_gn_5_80620 Lactuca sativa HOM05D005445 ORTHO05D007043 1.4e-102 377.1 318 63.8
PSO170G6081 Papaver somniferum HOM05D005445 ORTHO05D007043 4.1e-102 375.6 326 60.7
PSO063G4940 Papaver somniferum HOM05D005445 ORTHO05D007043 2.3e-100 369.8 326 60.7
Os05g0594800 Oryza sativa ssp. japonica HOM05D005445 ORTHO05D007043 2.9e-100 369.4 321 61.1
Aa31LG5G9140 Aethionema arabicum HOM05D005445 ORTHO05D007043 1.5e-99 367.1 308 62.7
Migut.L01918 Erythranthe guttata HOM05D005445 ORTHO05D007043 7.3e-99 364.8 314 62.1
Ah.10g032730 Amaranthus hybridus HOM05D005445 ORTHO05D007043 4.6e-93 345.5 338 58.6
Zm00001eb297230 Zea mays HOM05D005445 ORTHO05D007043 7.8e-93 344.7 336 56.8
Peaxi162Scf01184g00140 Petunia axillaris HOM05D005445 ORTHO05D007043 3.0e-92 342.8 352 54.0
SEGI_14233 Sequoiadendron giganteum HOM05D005445 ORTHO05D007043 3.6e-90 335.9 354 53.7
EL10Ac2g03624 Beta vulgaris HOM05D005445 ORTHO05D007043 1.4e-89 334.0 366 53.8
Lj5C772G2 Lonicera japonica HOM05D005445 ORTHO05D007043 1.4e-89 334.0 283 63.3
AUR62027984 Chenopodium quinoa HOM05D005445 ORTHO05D007043 8.9e-89 331.3 367 53.7
unitig_85.g27245 Utricularia gibba HOM05D005445 ORTHO05D007043 1.3e-87 327.4 295 58.6
Lalb_Chr05g0223811 Lupinus albus HOM05D005445 ORTHO05D007043 3.7e-87 325.9 258 67.4
vmacro20760 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 4.6e-85 318.9 389 48.1
AUR62020729 Chenopodium quinoa HOM05D005445 ORTHO05D007043 7.8e-85 318.2 335 54.3
Dinv26479 Davidia involucrata HOM05D005445 ORTHO05D007043 2.9e-79 299.7 236 68.6
Hma1.2p1_0314F.1_g122080 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 7.6e-72 275.0 234 64.5
Pp3c21_370 Physcomitrium patens HOM05D005445 ORTHO05D007043 9.9e-72 274.6 322 48.1
Dinv00323 Davidia involucrata HOM05D005445 ORTHO05D007043 7.1e-70 268.5 211 69.7
COL.COLO4_23410 Corchorus olitorius HOM05D005445 ORTHO05D007043 5.6e-67 258.8 152 82.9
SMO116G0379 Selaginella moellendorffii HOM05D005445 ORTHO05D007043 4.8e-66 255.8 312 47.1
Sc14g0007060 Simmondsia chinensis HOM05D005445 ORTHO05D007043 1.2e-64 251.1 240 61.2
Mapoly0011s0124 Marchantia polymorpha HOM05D005445 ORTHO05D007043 4.6e-61 239.2 337 45.1
CDE02G2220 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 6.9e-57 225.3 239 54.8
CBR_g28055 Chara braunii HOM05D005445 ORTHO05D007043 7.6e-56 221.9 347 40.9
Haze_19097 Corylus avellana HOM05D005445 ORTHO05D007043 1.1e-54 218.0 216 55.6
Sc14g0006300 Simmondsia chinensis HOM05D005445 ORTHO05D007043 1.7e-39 167.5 135 66.7
MD13G1232400 Malus domestica HOM05D005445 ORTHO05D007043 2.2e-31 140.6 187 49.2
MCO02G027 Micromonas commoda HOM05D005445 ORTHO05D007043 6.5e-31 139.0 349 31.2
C03p32230 Brassica napus HOM05D005445 ORTHO05D007043 1.0e-28 131.7 80 80.0
BolC3t15564H Brassica oleracea HOM05D005445 ORTHO05D007043 1.0e-28 131.7 80 80.0
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 8.8e-28 128.6 91 67.0
vmacro07726 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 3.3e-27 126.7 90 66.7
HPP92_015797 Vanilla planifolia HOM05D005445 ORTHO05D007043 9.7e-27 125.2 309 32.0
Cre11.g469450 Chlamydomonas reinhardtii HOM05D005445 ORTHO05D007043 3.8e-23 113.2 335 28.1
Lalb_Chr05g0223801 Lupinus albus HOM05D005445 ORTHO05D007043 1.4e-20 104.8 64 76.6
HanXRQChr09g0242991 Helianthus annuus HOM05D005445 ORTHO05D007043 4.8e-18 96.3 87 62.1
HanXRQChr09g0248391 Helianthus annuus HOM05D005445 ORTHO05D007043 1.0e-15 88.6 94 58.5
SHI03135 Sapria himalayana HOM05D005445 ORTHO05D007043 1.0e-15 88.6 51 80.4
HanXRQChr09g0242981 Helianthus annuus HOM05D005445 ORTHO05D007043 2.2e-15 87.4 94 57.4
HanXRQChr13g0395691 Helianthus annuus HOM05D005445 ORTHO05D007043 2.2e-15 87.4 94 57.4
SGA_v2.0_scaffold21G09605 Striga asiatica HOM05D005445 ORTHO05D007043 8.5e-15 85.5 90 51.1
HanXRQChr09g0246171 Helianthus annuus HOM05D005445 ORTHO05D007043 1.5e-14 84.7 91 58.2
vmacro04822 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 3.0e-12 77.0 42 81.0
Potri.003G027520 Populus trichocarpa HOM05D005445 ORTHO05D007043 2.2e-07 60.8 46 65.2
Potri.003G027722 Populus trichocarpa HOM05D005445 ORTHO05D007043 3.8e-07 60.1 64 48.4


User provided reference genes

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