Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib147G0908 Durio zibethinus HOM05D005338 ORTHO05D006550 1.8e-114 416.0 218 100.0
Gohir.A11G203500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 2.0e-110 402.5 218 96.3
Gorai.003G040400 Gossypium raimondii HOM05D005338 ORTHO05D006550 2.0e-110 402.5 218 96.3
Gohir.D03G039200 Gossypium hirsutum HOM05D005338 ORTHO05D006550 4.5e-110 401.4 218 96.3
Gohir.A02G128500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 7.7e-110 400.6 218 95.9
Thecc.01G098200 Theobroma cacao HOM05D005338 ORTHO05D006550 2.9e-109 398.7 218 95.0
COL.COLO4_27273 Corchorus olitorius HOM05D005338 ORTHO05D006550 1.5e-108 396.4 218 95.0
Cpa.g.sc337.5 Carica papaya HOM05D005338 ORTHO05D006550 5.6e-108 394.4 218 94.5
Gorai.007G236400 Gossypium raimondii HOM05D005338 ORTHO05D006550 1.2e-107 393.3 211 94.8
Actinidia15288 Actinidia chinensis HOM05D005338 ORTHO05D006550 4.7e-107 391.3 218 92.7
Gohir.D11G220100 Gossypium hirsutum HOM05D005338 ORTHO05D006550 1.2e-105 386.7 209 96.2
QL02p007082 Quercus lobata HOM05D005338 ORTHO05D006550 3.4e-105 385.2 217 90.8
Cfa002226 Carpinus fangiana HOM05D005338 ORTHO05D006550 5.7e-105 384.4 218 88.1
CiPaw.15G069200 Carya illinoinensis HOM05D005338 ORTHO05D006550 4.9e-104 381.3 218 87.2
Manes.13G095300 Manihot esculenta HOM05D005338 ORTHO05D006550 1.1e-103 380.2 220 91.4
arahy.Tifrunner.gnm1.ann1.82M2ZV Arachis hypogaea HOM05D005338 ORTHO05D006550 1.4e-103 379.8 218 89.9
arahy.Tifrunner.gnm1.ann1.F09FAE Arachis hypogaea HOM05D005338 ORTHO05D006550 1.4e-103 379.8 218 89.9
arahy.Tifrunner.gnm1.ann1.N4382H Arachis hypogaea HOM05D005338 ORTHO05D006550 1.4e-103 379.8 218 89.9
arahy.Tifrunner.gnm1.ann1.VZ94AI Arachis hypogaea HOM05D005338 ORTHO05D006550 1.4e-103 379.8 218 89.9
Hma1.2p1_0471F.1_g159310 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 1.4e-103 379.8 218 89.9
Oeu012884.1 Olea europaea HOM05D005338 ORTHO05D006550 1.8e-103 379.4 218 89.0
Cfa018461 Carpinus fangiana HOM05D005338 ORTHO05D006550 3.2e-103 378.6 215 87.9
Cc07_g04760 Coffea canephora HOM05D005338 ORTHO05D006550 3.2e-103 378.6 218 87.6
GSVIVG01009622001 Vitis vinifera HOM05D005338 ORTHO05D006550 5.4e-103 377.9 216 87.0
Prupe.1G517500 Prunus persica HOM05D005338 ORTHO05D006550 7.0e-103 377.5 217 89.4
Glyma.15G160500 Glycine max HOM05D005338 ORTHO05D006550 1.2e-102 376.7 218 87.6
CSS0015965 Camellia sinensis var. sinensis HOM05D005338 ORTHO05D006550 1.6e-102 376.3 218 86.7
Prupe.1G518900 Prunus persica HOM05D005338 ORTHO05D006550 2.0e-102 375.9 217 89.4
VMungo1215G3044 Vigna mungo HOM05D005338 ORTHO05D006550 2.7e-102 375.6 218 87.6
Glyma.09G054300 Glycine max HOM05D005338 ORTHO05D006550 3.5e-102 375.2 218 87.6
Phvul.009G240644 Phaseolus vulgaris HOM05D005338 ORTHO05D006550 5.9e-102 374.4 218 89.9
SGA_v2.0_scaffold4G02341 Striga asiatica HOM05D005338 ORTHO05D006550 5.9e-102 374.4 218 85.8
VMungo1309G1758 Vigna mungo HOM05D005338 ORTHO05D006550 5.9e-102 374.4 218 89.0
CANSAT56G3114 Cannabis sativa HOM05D005338 ORTHO05D006550 1.0e-101 373.6 218 87.6
Migut.H00565 Erythranthe guttata HOM05D005338 ORTHO05D006550 1.0e-101 373.6 218 85.8
Nitab4.5_0003384g0030 Nicotiana tabacum HOM05D005338 ORTHO05D006550 1.0e-101 373.6 218 85.8
Nn8g40744 Nelumbo nucifera HOM05D005338 ORTHO05D006550 1.7e-101 372.9 218 87.2
THA.LOC104824882 Tarenaya hassleriana HOM05D005338 ORTHO05D006550 1.7e-101 372.9 218 88.5
CANSAT25G1955 Cannabis sativa HOM05D005338 ORTHO05D006550 3.0e-101 372.1 218 85.3
SalBow1G1006 Salvia bowleyana HOM05D000168 ORTHO05D006550 3.0e-101 372.1 218 88.1
MSTRG.2958 Avicennia marina HOM05D005338 ORTHO05D006550 3.9e-101 371.7 218 86.2
Sed0010775 Sechium edule HOM05D005338 ORTHO05D006550 5.0e-101 371.3 218 84.4
ClCG08G015430 Citrullus lanatus HOM05D005338 ORTHO05D006550 6.6e-101 370.9 218 84.4
CsaV3_2G028360 Cucumis sativus L. HOM05D005338 ORTHO05D006550 6.6e-101 370.9 218 84.4
Eucgr.F01508 Eucalyptus grandis HOM05D005338 ORTHO05D006550 6.6e-101 370.9 218 87.2
Nitab4.5_0000154g0040 Nicotiana tabacum HOM05D005338 ORTHO05D006550 1.1e-100 370.2 217 85.3
Lj4g0021487 Lotus japonicus HOM05D005338 ORTHO05D006550 1.9e-100 369.4 218 87.6
MBI01_g22964_MAGBIO Magnolia biondii HOM05D005338 ORTHO05D006550 2.5e-100 369.0 218 84.9
TWI74G1059 Tripterygium wilfordii HOM05D005338 ORTHO05D006550 2.5e-100 369.0 218 84.9
Ciclev10026443m.g Citrus clementina HOM05D005338 ORTHO05D006550 5.6e-100 367.9 211 88.2
DCAR_003287 Daucus carota HOM05D005338 ORTHO05D006550 5.6e-100 367.9 218 86.7
Medtr2g438770 Medicago truncatula HOM05D005338 ORTHO05D006550 7.3e-100 367.5 218 84.9
Glyma.18G135700 Glycine max HOM05D005338 ORTHO05D006550 1.2e-99 366.7 218 86.2
PGR083G0298 Punica granatum HOM05D005338 ORTHO05D006550 1.2e-99 366.7 218 86.2
CAN.G162.113 Capsicum annuum HOM05D005338 ORTHO05D006550 2.1e-99 365.9 215 84.7
RcHm_v2.0_Chr5g0038311 Rosa chinensis HOM05D005338 ORTHO05D006550 4.7e-99 364.8 218 86.2
Solyc06g008010.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 8.0e-99 364.0 215 84.7
PGSC0003DMG400014704 Solanum tuberosum HOM05D005338 ORTHO05D006550 8.0e-99 364.0 215 84.7
AT2G22370 Arabidopsis thaliana HOM05D005338 ORTHO05D006550 1.0e-98 363.6 218 84.9
Sopen06g002850 Solanum pennellii HOM05D005338 ORTHO05D006550 1.8e-98 362.8 215 84.2
EL10Ac3g06218 Beta vulgaris HOM05D005338 ORTHO05D006550 2.3e-98 362.5 218 84.9
Potri.007G095300 Populus trichocarpa HOM05D005338 ORTHO05D006550 2.3e-98 362.5 218 89.0
vmacro21598 Vaccinium macrocarpon HOM05D005338 ORTHO05D006550 2.3e-98 362.5 207 89.9
CARHR113580 Cardamine hirsuta HOM05D005338 ORTHO05D006550 8.9e-98 360.5 218 82.6
Thhalv10000318m.g Eutrema salsugineum HOM05D005338 ORTHO05D006550 4.4e-97 358.2 218 83.9
Lalb_Chr15g0083931 Lupinus albus HOM05D005338 ORTHO05D006550 4.4e-97 358.2 211 84.4
FvH4_5g37300 Fragaria vesca HOM05D005338 ORTHO05D006550 5.8e-97 357.8 217 83.4
AL4G11870 Arabidopsis lyrata HOM05D005338 ORTHO05D006550 1.3e-96 356.7 218 83.5
FAN08G1597 Fragaria x ananassa HOM05D005338 ORTHO05D006550 1.7e-96 356.3 217 82.9
FAN04G2403 Fragaria x ananassa HOM05D005338 ORTHO05D006550 1.4e-95 353.2 214 82.2
Aqoxy6G01960 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 3.2e-95 352.1 218 80.3
Carub.0004s0155 Capsella rubella HOM05D005338 ORTHO05D006550 3.2e-95 352.1 218 82.6
Psat1g148520 Pisum sativum HOM05D005338 ORTHO05D006550 3.2e-95 352.1 223 79.8
Hund12454 Selenicereus undatus HOM05D005338 ORTHO05D006550 7.0e-95 350.9 207 84.1
MD15G1369800 Malus domestica HOM05D005338 ORTHO05D006550 1.2e-94 350.1 221 83.3
Haze_25403 Corylus avellana HOM05D005338 ORTHO05D006550 2.0e-94 349.4 294 66.0
Peaxi162Scf00479g00910 Petunia axillaris HOM05D005338 ORTHO05D006550 4.6e-94 348.2 206 85.0
ECA247G2066 Erigeron canadensis HOM05D005338 ORTHO05D006550 6.0e-94 347.8 220 80.9
PSO017G6030 Papaver somniferum HOM05D005338 ORTHO05D006550 1.7e-93 346.3 218 78.4
BcaC02g08666 Brassica carinata HOM05D005338 ORTHO05D006550 2.3e-93 345.9 219 82.2
A04p16850 Brassica napus HOM05D005338 ORTHO05D006550 3.9e-93 345.1 219 82.2
BraA04t17318Z Brassica rapa HOM05D005338 ORTHO05D006550 3.9e-93 345.1 219 82.2
Medtr5g044730 Medicago truncatula HOM05D005338 ORTHO05D006550 3.9e-93 345.1 207 83.6
BcaC02g08711 Brassica carinata HOM05D005338 ORTHO05D006550 5.0e-93 344.7 219 82.2
C04p51430 Brassica napus HOM05D005338 ORTHO05D006550 5.0e-93 344.7 219 82.2
FAN13G0739 Fragaria x ananassa HOM05D005338 ORTHO05D006550 8.6e-93 344.0 202 84.2
FAN18G4080 Fragaria x ananassa HOM05D005338 ORTHO05D006550 1.1e-92 343.6 202 84.2
HanXRQChr04g0104391 Helianthus annuus HOM05D005338 ORTHO05D006550 1.5e-92 343.2 221 79.6
Sabra07G0078500 Salix brachista HOM05D005338 ORTHO05D006550 1.5e-92 343.2 211 85.3
Aqoxy1G02678 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 1.9e-92 342.8 218 78.0
TPR.G29215 Trifolium pratense HOM05D005338 ORTHO05D006550 1.9e-92 342.8 207 83.1
Lsat_1_v5_gn_1_19481 Lactuca sativa HOM05D005338 ORTHO05D006550 2.5e-92 342.4 206 84.0
BolC4t26735H Brassica oleracea HOM05D005338 ORTHO05D006550 4.3e-92 341.7 219 81.7
PSO170G4003 Papaver somniferum HOM05D005338 ORTHO05D006550 2.8e-91 339.0 218 77.5
unitig_744.g23988 Utricularia gibba HOM05D005338 ORTHO05D006550 2.3e-90 335.9 215 80.5
CDE07G0352 Ceratophyllum demersum HOM05D005338 ORTHO05D006550 1.3e-88 330.1 196 84.2
Sp4g01410 Schrenkiella parvula HOM05D005338 ORTHO05D006550 4.9e-88 328.2 218 77.5
Aa31LG7G14440 Aethionema arabicum HOM05D005338 ORTHO05D006550 6.4e-88 327.8 277 63.9
ATR0767G114 Amborella trichopoda HOM05D005338 ORTHO05D006550 1.9e-87 326.2 218 74.8
Sopen03g010490 Solanum pennellii HOM05D005338 ORTHO05D006550 2.4e-87 325.9 215 76.7
Os02g0193900 Oryza sativa ssp. japonica HOM05D005338 ORTHO05D006550 4.1e-87 325.1 201 78.1
Sopen03g021660 Solanum pennellii HOM05D005338 ORTHO05D006550 7.1e-87 324.3 215 76.3
Zm00001eb236490 Zea mays HOM05D005338 ORTHO05D006550 1.6e-86 323.2 218 76.1
Sopen03g021630 Solanum pennellii HOM05D005338 ORTHO05D006550 4.6e-86 321.6 215 75.8
Dinv36026 Davidia involucrata HOM05D005338 ORTHO05D006550 7.8e-86 320.9 215 77.7
HPP92_021909 Vanilla planifolia HOM05D005338 ORTHO05D006550 1.3e-85 320.1 211 73.0
CAN.G176.23 Capsicum annuum HOM05D005338 ORTHO05D006550 1.1e-79 300.4 185 81.6
Rhsim06G0038600 Rhododendron simsii HOM05D005338 ORTHO05D006550 2.1e-78 296.2 185 82.2
Ca_02026_v3 Cicer arietinum L. HOM05D005338 ORTHO05D006550 2.3e-77 292.7 164 86.6
MELO3C010912.2 Cucumis melo HOM05D005338 ORTHO05D006550 3.0e-77 292.4 174 83.3
SHI19279 Sapria himalayana HOM05D005338 ORTHO05D006550 5.1e-77 291.6 201 74.6
Lj4A782T79 Lonicera japonica HOM05D005338 ORTHO05D006550 3.3e-76 288.9 173 83.2
Mapoly0023s0045 Marchantia polymorpha HOM05D005338 ORTHO05D006550 1.4e-71 273.5 210 65.7
Pp3c14_750 Physcomitrium patens HOM05D005338 ORTHO05D006550 1.2e-70 270.4 219 59.4
SMO236G0045 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 1.1e-68 263.8 210 61.4
SalBow1G1231 Salvia bowleyana HOM05D005338 ORTHO05D006550 1.1e-66 257.3 153 88.9
AagrBONN_evm.TU.Sc2ySwM_362.1720 Anthoceros agrestis HOM05D005338 ORTHO05D006550 2.3e-61 239.6 210 57.6
AUR62040070 Chenopodium quinoa HOM05D005338 ORTHO05D006550 2.3e-61 239.6 139 84.2
TAR628G0003 Trochodendron aralioides HOM05D005338 ORTHO05D006550 8.7e-61 237.7 145 83.4
Sc15g0006680 Simmondsia chinensis HOM05D005338 ORTHO05D006550 1.5e-57 226.9 145 81.4
Solyc03g046360.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 4.5e-57 225.3 212 58.5
RcHm_v2.0_Chr7g0238911 Rosa chinensis HOM05D005338 ORTHO05D006550 1.2e-54 217.2 176 66.5
Hma1.2p1_0023F.1_g015170 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 3.0e-53 212.6 148 77.7
Sopen00g011030 Solanum pennellii HOM05D005338 ORTHO05D006550 2.2e-48 196.4 215 52.6
RcHm_v2.0_Chr5g0034471 Rosa chinensis HOM05D005338 ORTHO05D006550 3.8e-48 195.7 119 82.4
RcHm_v2.0_Chr7g0238871 Rosa chinensis HOM05D005338 ORTHO05D006550 2.5e-47 193.0 110 84.5
SMO236G0041 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 3.3e-44 182.6 162 56.2
Sopen00g003620 Solanum pennellii HOM05D005338 ORTHO05D006550 2.1e-43 179.9 174 56.9
Sopen03g021680 Solanum pennellii HOM05D005338 ORTHO05D006550 7.9e-38 161.4 215 47.4
RcHm_v2.0_Chr7g0238881 Rosa chinensis HOM05D005338 ORTHO05D006550 1.0e-32 144.4 91 81.3
TPR.G5804 Trifolium pratense HOM05D005338 ORTHO05D006550 6.5e-32 141.7 84 85.7
Atru.chr1.3597 Acer truncatum HOM05D005338 ORTHO05D006550 3.1e-26 122.9 81 84.0
Atru.chr12.488 Acer truncatum HOM05D005338 ORTHO05D006550 1.0e-16 91.3 45 95.6
BcaC04g23293 Brassica carinata HOM05D005338 ORTHO05D006550 1.7e-16 90.5 56 75.0
TAR628G1182 Trochodendron aralioides HOM05D005338 ORTHO05D006550 1.9e-15 87.0 46 84.8
SEGI_27973 Sequoiadendron giganteum HOM05D005338 ORTHO05D006550 1.6e-14 84.0 53 71.7
BraA09t41155Z Brassica rapa HOM05D005338 ORTHO05D006550 1.4e-13 80.9 66 65.2
MD08G1183200 Malus domestica HOM05D005338 ORTHO05D006550 3.0e-13 79.7 216 35.2
C08p40830 Brassica napus HOM05D005338 ORTHO05D006550 1.1e-07 61.2 34 88.2
BolC8t51648H Brassica oleracea HOM05D005338 ORTHO05D006550 3.2e-07 59.7 34 88.2
Lj4A782T80 Lonicera japonica HOM05D005338 ORTHO05D234559 3.6e-06 56.2 34 97.1


User provided reference genes

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