Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib128G0118 Durio zibethinus HOM05D001260 ORTHO05D004134 3.3e-50 201.4 105 100.0
Duzib114G0845 Durio zibethinus HOM05D001260 ORTHO05D004134 6.9e-40 167.2 105 83.8
Thecc.10G033200 Theobroma cacao HOM05D001260 ORTHO05D004134 4.5e-39 164.5 105 81.9
Thecc.10G033600 Theobroma cacao HOM05D001260 ORTHO05D004134 8.5e-38 160.2 105 80.0
Gohir.D05G301900 Gossypium hirsutum HOM05D001260 ORTHO05D004134 4.2e-37 157.9 104 82.7
Gorai.009G320000 Gossypium raimondii HOM05D001260 ORTHO05D004134 4.2e-37 157.9 104 82.7
Gohir.A10G224000 Gossypium hirsutum HOM05D001260 ORTHO05D004134 5.5e-37 157.5 103 80.6
Gorai.011G270300 Gossypium raimondii HOM05D001260 ORTHO05D004134 7.2e-37 157.1 103 81.6
Gohir.D10G237000 Gossypium hirsutum HOM05D001260 ORTHO05D004134 1.6e-36 156.0 103 80.6
Gohir.A05G302400 Gossypium hirsutum HOM05D001260 ORTHO05D004134 2.1e-36 155.6 104 81.7
Gorai.011G270700 Gossypium raimondii HOM05D001260 ORTHO05D004134 2.7e-36 155.2 103 79.6
CiPaw.01G292400 Carya illinoinensis HOM05D001260 ORTHO05D004134 1.4e-35 152.9 104 77.9
Gorai.011G270500 Gossypium raimondii HOM05D001260 ORTHO05D004134 1.8e-35 152.5 101 80.2
Sed0004245 Sechium edule HOM05D001260 ORTHO05D004134 2.3e-35 152.1 103 77.7
Sabra08G0044800 Salix brachista HOM05D001260 ORTHO05D004134 1.1e-34 149.8 104 76.0
Dinv16267 Davidia involucrata HOM05D001260 ORTHO05D004134 3.3e-34 148.3 106 74.5
Potri.008G060700 Populus trichocarpa HOM05D001260 ORTHO05D004134 3.3e-34 148.3 104 75.0
QL08p061745 Quercus lobata HOM05D001260 ORTHO05D004134 4.4e-34 147.9 103 76.7
Manes.10G022400 Manihot esculenta HOM05D001260 ORTHO05D004134 5.7e-34 147.5 104 75.0
Sed0007578 Sechium edule HOM05D001260 ORTHO05D004134 1.3e-33 146.4 103 73.8
Gohir.D10G236624 Gossypium hirsutum HOM05D001260 ORTHO05D004134 1.7e-33 146.0 97 80.4
MELO3C008247.2 Cucumis melo HOM05D001260 ORTHO05D004134 6.3e-33 144.1 103 73.8
TWI63G0278 Tripterygium wilfordii HOM05D001260 ORTHO05D004134 1.1e-32 143.3 105 74.3
CsaV3_6G001430 Cucumis sativus L. HOM05D001260 ORTHO05D004134 1.4e-32 142.9 103 73.8
MD01G1140700 Malus domestica HOM05D001260 ORTHO05D004134 3.1e-32 141.7 104 72.1
RcHm_v2.0_Chr1g0368661 Rosa chinensis HOM05D001260 ORTHO05D004134 3.1e-32 141.7 104 74.0
TWI38G0285 Tripterygium wilfordii HOM05D001260 ORTHO05D004134 3.1e-32 141.7 104 73.1
COL.COLO4_25532 Corchorus olitorius HOM05D001260 ORTHO05D004134 4.1e-32 141.4 89 80.9
Manes.07G121400 Manihot esculenta HOM05D001260 ORTHO05D004134 7.0e-32 140.6 104 72.1
MD07G1205000 Malus domestica HOM05D001260 ORTHO05D004134 9.1e-32 140.2 104 72.1
Ciclev10033559m.g Citrus clementina HOM05D001260 ORTHO05D004134 1.2e-31 139.8 105 71.4
FvH4_7g23510 Fragaria vesca HOM05D001260 ORTHO05D004134 1.2e-31 139.8 104 74.0
FAN03G2667 Fragaria x ananassa HOM05D001260 ORTHO05D004134 1.2e-31 139.8 104 74.0
FAN06G4376 Fragaria x ananassa HOM05D001260 ORTHO05D004134 1.2e-31 139.8 104 74.0
FAN10G0370 Fragaria x ananassa HOM05D001260 ORTHO05D004134 1.2e-31 139.8 104 74.0
CANSAT56G4350 Cannabis sativa HOM05D001260 ORTHO05D004134 1.6e-31 139.4 105 69.5
Lalb_Chr04g0250961 Lupinus albus HOM05D001260 ORTHO05D004134 2.0e-31 139.0 105 74.3
Atru.chr12.295 Acer truncatum HOM05D001260 ORTHO05D004134 4.5e-31 137.9 104 70.2
Atru.chr12.334 Acer truncatum HOM05D001260 ORTHO05D004134 4.5e-31 137.9 104 70.2
ClCG11G006570 Citrullus lanatus HOM05D001260 ORTHO05D004134 4.5e-31 137.9 102 71.6
Lalb_Chr17g0346411 Lupinus albus HOM05D001260 ORTHO05D004134 4.5e-31 137.9 105 74.3
GSVIVG01016463001 Vitis vinifera HOM05D001260 ORTHO05D004134 1.0e-30 136.7 106 68.9
Cpa.g.sc19.263 Carica papaya HOM05D001260 ORTHO05D004134 1.3e-30 136.3 105 74.3
Hma1.2p1_0039F.1_g024740 Hydrangea macrophylla HOM05D001260 ORTHO05D004134 1.3e-30 136.3 105 68.6
FvH4_7g23851 Fragaria vesca HOM05D001260 ORTHO05D004134 1.7e-30 136.0 104 72.1
FAN06G3528 Fragaria x ananassa HOM05D001260 ORTHO05D004134 1.7e-30 136.0 104 72.1
Eucgr.J02123 Eucalyptus grandis HOM05D001260 ORTHO05D004134 3.8e-30 134.8 105 68.6
LjContig00141g0022758 Lotus japonicus HOM05D001260 ORTHO05D004134 1.1e-29 133.3 104 70.2
Lalb_Chr10g0104791 Lupinus albus HOM05D001260 ORTHO05D004134 1.5e-29 132.9 105 69.5
CSS0048341 Camellia sinensis var. sinensis HOM05D001260 ORTHO05D004134 4.2e-29 131.3 97 74.2
Rhsim03G0137000 Rhododendron simsii HOM05D001260 ORTHO05D004134 4.2e-29 131.3 105 70.5
Cc02_g07290 Coffea canephora HOM05D001260 ORTHO05D004134 5.5e-29 131.0 105 69.5
DCAR_011747 Daucus carota HOM05D001260 ORTHO05D004134 1.2e-28 129.8 105 66.7
Glyma.02G251500 Glycine max HOM05D001260 ORTHO05D004134 1.2e-28 129.8 105 72.4
Glyma.14G065300 Glycine max HOM05D001260 ORTHO05D004134 1.6e-28 129.4 105 72.4
VMungo0647G2094 Vigna mungo HOM05D001260 ORTHO05D004134 3.6e-28 128.3 104 70.2
Phvul.008G230000 Phaseolus vulgaris HOM05D001260 ORTHO05D004134 8.0e-28 127.1 104 71.2
Migut.F00740 Erythranthe guttata HOM05D001260 ORTHO05D004134 1.0e-27 126.7 104 66.3
HanXRQChr08g0221231 Helianthus annuus HOM05D001260 ORTHO05D004134 1.0e-27 126.7 109 61.5
TAR369G0466 Trochodendron aralioides HOM05D001260 ORTHO05D004134 1.0e-27 126.7 105 69.5
Medtr5g081240 Medicago truncatula HOM05D001260 ORTHO05D004134 1.4e-27 126.3 104 68.3
FAN01G0960 Fragaria x ananassa HOM05D001260 ORTHO05D004134 2.3e-27 125.6 95 72.6
GSVIVG01008874001 Vitis vinifera HOM05D001260 ORTHO05D004134 8.8e-27 123.6 97 67.0
Nn2g13504 Nelumbo nucifera HOM05D001260 ORTHO05D004134 1.1e-26 123.2 105 67.6
ECA233G1462 Erigeron canadensis HOM05D001260 ORTHO05D004134 1.5e-26 122.9 105 62.9
THA.LOC104816577 Tarenaya hassleriana HOM05D001260 ORTHO05D004134 1.5e-26 122.9 97 64.9
Oeu039009.1 Olea europaea HOM05D001260 ORTHO05D004134 2.0e-26 122.5 105 63.8
Ca_05847_v3 Cicer arietinum L. HOM05D001260 ORTHO05D004134 4.4e-26 121.3 104 66.3
Psat7g258880 Pisum sativum HOM05D001260 ORTHO05D004134 4.4e-26 121.3 104 64.4
PGR044G1255 Punica granatum HOM05D001260 ORTHO05D004134 7.5e-26 120.6 89 74.2
Sp3g09610 Schrenkiella parvula HOM05D001260 ORTHO05D004134 7.5e-26 120.6 105 61.0
Lsat_1_v5_gn_8_14640 Lactuca sativa HOM05D001260 ORTHO05D004134 2.2e-25 119.0 105 60.0
TPR.G25828 Trifolium pratense HOM05D001260 ORTHO05D004134 2.8e-25 118.6 90 66.7
Ciclev10030832m.g Citrus clementina HOM05D001260 ORTHO05D004134 4.8e-25 117.9 93 68.8
TPR.G1704 Trifolium pratense HOM05D001260 ORTHO05D004134 8.2e-25 117.1 90 66.7
THA.LOC104826868 Tarenaya hassleriana HOM05D001260 ORTHO05D004134 1.1e-24 116.7 105 61.0
MSTRG.259 Avicennia marina HOM05D001260 ORTHO05D004134 1.4e-24 116.3 101 64.4
Thhalv10020101m.g Eutrema salsugineum HOM05D001260 ORTHO05D004134 1.8e-24 115.9 100 59.0
Oeu001521.1 Olea europaea HOM05D001260 ORTHO05D004134 1.8e-24 115.9 104 62.5
Thhalv10012734m.g Eutrema salsugineum HOM05D001260 ORTHO05D004134 7.0e-24 114.0 103 64.1
Sp6g36920 Schrenkiella parvula HOM05D001260 ORTHO05D004134 7.0e-24 114.0 103 65.0
EL10Ac3g06309 Beta vulgaris HOM05D001260 ORTHO05D004134 9.1e-24 113.6 105 58.1
AL6G15910 Arabidopsis lyrata HOM05D001260 ORTHO05D004134 1.6e-23 112.8 107 61.7
AT5G05970 Arabidopsis thaliana HOM05D001260 ORTHO05D004134 1.6e-23 112.8 104 61.5
C09p70820 Brassica napus HOM05D001260 ORTHO05D004134 1.6e-23 112.8 103 61.2
Carub.0006s0486 Capsella rubella HOM05D001260 ORTHO05D004134 1.6e-23 112.8 104 61.5
Hund12217 Selenicereus undatus HOM05D001260 ORTHO05D004134 1.6e-23 112.8 105 56.2
Aa31LG11G7010 Aethionema arabicum HOM05D001260 ORTHO05D004134 2.0e-23 112.5 107 60.7
CAN.G986.45 Capsicum annuum HOM05D001260 ORTHO05D004134 3.5e-23 111.7 98 61.2
CAN.G986.46 Capsicum annuum HOM05D001260 ORTHO05D004134 3.5e-23 111.7 98 61.2
AUR62030032 Chenopodium quinoa HOM05D001260 ORTHO05D004134 3.5e-23 111.7 105 56.2
BcaNung06227 Brassica carinata HOM05D001260 ORTHO05D004134 5.9e-23 110.9 92 68.5
BolC9t59841H Brassica oleracea HOM05D001260 ORTHO05D004134 7.7e-23 110.5 91 68.1
arahy.Tifrunner.gnm1.ann1.1DVI41 Arachis hypogaea HOM05D001260 ORTHO05D004134 1.3e-22 109.8 96 67.7
Sabra10G0152200 Salix brachista HOM05D001260 ORTHO05D004134 1.3e-22 109.8 94 66.0
A10p30380 Brassica napus HOM05D001260 ORTHO05D004134 2.9e-22 108.6 79 72.2
BraA10t45077Z Brassica rapa HOM05D001260 ORTHO05D004134 2.9e-22 108.6 79 72.2
Aqoxy1G00447 Aquilegia oxysepala HOM05D001260 ORTHO05D004134 3.8e-22 108.2 104 60.6
BcaB06g25631 Brassica carinata HOM05D001260 ORTHO05D004134 5.0e-22 107.8 102 57.8
BcaNung07355 Brassica carinata HOM05D001260 ORTHO05D004134 5.0e-22 107.8 102 57.8
C05p56770 Brassica napus HOM05D001260 ORTHO05D004134 5.0e-22 107.8 102 57.8
BolC5t34341H Brassica oleracea HOM05D001260 ORTHO05D004134 5.0e-22 107.8 102 57.8
A05p38010 Brassica napus HOM05D001260 ORTHO05D004134 8.5e-22 107.1 102 57.8
BraA05t22592Z Brassica rapa HOM05D001260 ORTHO05D004134 8.5e-22 107.1 102 57.8
CARHR207240 Cardamine hirsuta HOM05D001260 ORTHO05D004134 8.5e-22 107.1 104 61.5
Hund22801 Selenicereus undatus HOM05D001260 ORTHO05D004134 8.5e-22 107.1 102 57.8
arahy.Tifrunner.gnm1.ann1.TM7LMJ Arachis hypogaea HOM05D001260 ORTHO05D004134 1.5e-21 106.3 96 65.6
HPP92_020548 Vanilla planifolia HOM05D001260 ORTHO05D004134 3.2e-21 105.1 105 55.2
ATR0559G059 Amborella trichopoda HOM05D001260 ORTHO05D004134 1.2e-18 96.7 97 53.6
Oeu031370.1 Olea europaea HOM05D001260 ORTHO05D004134 9.8e-18 93.6 83 61.4
Os09g0267500 Oryza sativa ssp. japonica HOM05D001260 ORTHO05D004134 9.8e-18 93.6 89 56.2
Mapoly0118s0019 Marchantia polymorpha HOM05D001260 ORTHO05D004134 2.4e-16 89.0 84 54.8
Pp3c3_3110 Physcomitrium patens HOM05D001260 ORTHO05D004134 4.1e-16 88.2 74 56.8
Solyc03g079920.3 Solanum lycopersicum HOM05D001260 ORTHO05D004134 5.4e-16 87.8 103 48.5
Sopen03g027210 Solanum pennellii HOM05D001260 ORTHO05D004134 5.4e-16 87.8 103 48.5
SEGI_35518 Sequoiadendron giganteum HOM05D001260 ORTHO05D004134 9.1e-16 87.0 82 53.7
Gorai.011G270200 Gossypium raimondii HOM05D001260 ORTHO05D004134 2.0e-15 85.9 51 90.2
Pp3c26_11450 Physcomitrium patens HOM05D001260 ORTHO05D004134 2.7e-15 85.5 86 51.2
SalBow6G0807 Salvia bowleyana HOM05D001260 ORTHO05D004134 7.7e-15 84.0 66 63.6
PSO339G0232 Papaver somniferum HOM05D001260 ORTHO05D004134 1.0e-14 83.6 97 51.5
PSO384G2594 Papaver somniferum HOM05D001260 ORTHO05D004134 1.3e-14 83.2 89 55.1
Pp3c13_5000 Physcomitrium patens HOM05D001260 ORTHO05D004134 1.3e-14 83.2 102 43.1
RcHm_v2.0_Chr4g0410241 Rosa chinensis HOM05D001260 ORTHO05D004134 1.7e-14 82.8 61 67.2
SMO271G0180 Selaginella moellendorffii HOM05D001260 ORTHO05D004134 1.7e-14 82.8 93 48.4
TAR636G2673 Trochodendron aralioides HOM05D001260 ORTHO05D004134 1.7e-14 82.8 69 66.7
Pp3c4_30600 Physcomitrium patens HOM05D001260 ORTHO05D004134 2.9e-14 82.0 86 50.0
AUR62002609 Chenopodium quinoa HOM05D001260 ORTHO05D004134 6.5e-14 80.9 72 58.3
RcHm_v2.0_Chr1g0315431 Rosa chinensis HOM05D001260 ORTHO05D004134 3.2e-13 78.6 88 54.5
RcHm_v2.0_Chr1g0324411 Rosa chinensis HOM05D001260 ORTHO05D004134 3.2e-13 78.6 88 54.5
RcHm_v2.0_Chr1g0369591 Rosa chinensis HOM05D001260 ORTHO05D004134 4.2e-13 78.2 88 54.5
PGSC0003DMG400021693 Solanum tuberosum HOM05D001260 ORTHO05D004134 4.2e-13 78.2 103 45.6
AagrBONN_evm.TU.Sc2ySwM_344.891 Anthoceros agrestis HOM05D001260 ORTHO05D004134 4.7e-12 74.7 74 47.3
Rhsim08G0019600 Rhododendron simsii HOM05D001260 ORTHO05D004134 1.8e-11 72.8 83 51.8
CBR_g37200 Chara braunii HOM05D001260 ORTHO05D004134 2.3e-11 72.4 81 42.0
Nitab4.5_0000779g0070 Nicotiana tabacum HOM05D001260 ORTHO05D004134 6.8e-11 70.9 86 44.2
Nitab4.5_0004474g0060 Nicotiana tabacum HOM05D001260 ORTHO05D004134 8.8e-11 70.5 86 44.2
Rhsim04G0027700 Rhododendron simsii HOM05D001260 ORTHO05D004134 2.4e-08 62.4 56 57.1


User provided reference genes

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