Gene: Solyc03g079920.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc03g079920.3
  • Transcript Identifier Solyc03g079920.3.1
  • Gene Type Coding gene
  • Location SL4.0ch03 : 46387083-46394062 : positive

Gene Family Information

  • ID HOM05D001260
  • #Genes/#Species 496/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc03g079920.3.1
  • uniprot A0A3Q7FJT7
  • gene_id Solyc03g079920

Descriptions

  • Description WD40 repeat (AHRD V3.3 *** A0A200R4W9_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010968
IEA
GOA Databaseregulation of microtubule nucleation
GO:0010968
IEA
InterProregulation of microtubule nucleation
GO:0060236
IBA
GOA Databaseregulation of mitotic spindle organization
GO:2000694
IBA
GOA Databaseregulation of phragmoplast microtubule organization
GO:0032467
IBA
GOA Databasepositive regulation of cytokinesis
GO:0000919
IBA
GOA Databasecell plate assembly
GO:0009396
ISO
PLAZA Homology (enrichment)folic acid-containing compound biosynthetic process HOM05D001260
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT5G05970
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT5G05970
GO:0009058
ISO
PLAZA Homology (enrichment)biosynthetic process HOM05D001260

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0140496
IEA
GOA Databasegamma-tubulin complex binding
GO:0140496
IEA
InterProgamma-tubulin complex binding
GO:0005515
IEA
InterProprotein binding
GO:0004326
ISO
PLAZA Homology (enrichment)tetrahydrofolylpolyglutamate synthase activity HOM05D001260
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D001260

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005828
IBA
GOA Databasekinetochore microtubule

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044621 Protein NEDD1
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
20.1.2.1.7 Cytoskeleton organisation.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin Ring Complex (gamma-TuRC).regulatory component GCP-WD/NEDD1