Gene: Sopen03g027210

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g027210
  • Transcript Identifier Sopen03g027210.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 62647926-62654134 : negative

Gene Family Information

  • ID HOM05D001260
  • #Genes/#Species 496/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g027210.1

Descriptions

  • Description a WD40 repeat protein related to the animal NEDD1/GCP-WD protein, which interacts with the g-tubulin complex. Plays a critical role in MT organization during mitosis | NEURAL PRECURSOR CELL EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED GENE 1 (NEDD1) | FUNCTIONS IN: nucleotide binding | INVOLVED IN: in 6 processes | LOCATED IN: kinetochore microtubule, CUL4 RING ubiquitin ligase complex | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat-like-containing domain , WD40 repeat, conserved site , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010968
IEA
InterProregulation of microtubule nucleation
GO:0000919
ISO
PLAZA Integrative Orthologycell plate assembly AT5G05970
GO:0009396
ISO
PLAZA Homology (enrichment)folic acid-containing compound biosynthetic process HOM05D001260
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT5G05970
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT5G05970
GO:0009058
ISO
PLAZA Homology (enrichment)biosynthetic process HOM05D001260
GO:0060236
ISO
PLAZA Integrative Orthologyregulation of mitotic spindle organization AT5G05970
GO:2000694
ISO
PLAZA Integrative Orthologyregulation of phragmoplast microtubule organization AT5G05970
GO:0032467
ISO
PLAZA Integrative Orthologypositive regulation of cytokinesis AT5G05970

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0140496
IEA
InterProgamma-tubulin complex binding
GO:0004326
ISO
PLAZA Homology (enrichment)tetrahydrofolylpolyglutamate synthase activity HOM05D001260
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D001260

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005828
ISO
PLAZA Integrative Orthologykinetochore microtubule AT5G05970

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR044621 Protein NEDD1
Mapman id Description
20.1.2.1.7 Cytoskeleton organisation.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin Ring Complex (gamma-TuRC).regulatory component GCP-WD/NEDD1