Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 1.0e-265 919.5 461 100.0
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 2.7e-229 798.5 463 85.7
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 1.2e-224 783.1 461 84.6
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 2.6e-224 781.9 461 84.6
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 2.9e-223 778.5 461 83.9
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 4.3e-219 764.6 457 83.6
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 3.1e-177 625.5 468 65.8
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 3.6e-173 612.1 459 67.3
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 4.0e-172 608.6 465 68.0
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 2.6e-171 605.9 461 67.9
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 7.5e-171 604.4 463 67.8
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 2.8e-170 602.4 462 66.7
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 6.3e-170 601.3 461 65.9
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 6.3e-170 601.3 471 64.1
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 2.4e-169 599.4 465 66.2
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 4.1e-169 598.6 462 66.2
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 5.4e-169 598.2 465 66.5
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 4.5e-168 595.1 452 68.1
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 5.9e-168 594.7 475 63.6
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 2.9e-167 592.4 461 64.2
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 4.2e-166 588.6 461 64.4
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 4.2e-166 588.6 471 65.2
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 9.4e-166 587.4 456 66.7
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 3.4e-163 578.9 457 65.2
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 1.7e-162 576.6 458 64.8
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 6.3e-162 574.7 453 64.7
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 1.1e-161 573.9 470 63.6
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 1.4e-161 573.5 472 63.6
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 5.4e-161 571.6 473 61.9
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 9.2e-161 570.9 434 67.1
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 5.9e-160 568.2 461 62.7
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 5.9e-160 568.2 461 62.7
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 6.6e-159 564.7 461 62.0
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 8.6e-159 564.3 474 61.6
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 1.5e-158 563.5 472 62.1
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 5.6e-158 561.6 464 62.3
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 1.2e-157 560.5 460 63.0
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 5.2e-156 555.1 562 53.4
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 3.4e-155 552.4 454 62.3
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 5.7e-155 551.6 461 60.5
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 4.9e-154 548.5 462 60.8
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 8.3e-154 547.7 459 60.8
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 8.3e-154 547.7 468 61.1
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 1.6e-152 543.5 489 57.1
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 2.0e-152 543.1 459 61.0
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 2.0e-152 543.1 480 57.5
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 2.7e-152 542.7 460 61.7
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 5.9e-152 541.6 456 60.7
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 5.9e-152 541.6 477 58.1
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 7.8e-152 541.2 459 61.2
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 7.8e-152 541.2 470 60.0
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 2.3e-151 539.7 460 60.4
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 3.9e-151 538.9 477 57.9
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 1.5e-150 537.0 478 58.2
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 1.5e-150 537.0 470 59.8
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 1.9e-150 536.6 460 60.2
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 1.9e-150 536.6 433 63.3
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 7.3e-150 534.6 467 59.1
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 1.2e-149 533.9 461 60.1
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 1.2e-149 533.9 479 58.2
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 2.8e-149 532.7 479 58.0
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 3.6e-149 532.3 460 59.8
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.0e-148 530.8 465 60.6
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 2.3e-148 529.6 446 60.8
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 4.0e-148 528.9 465 57.2
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 6.8e-148 528.1 469 60.1
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 1.2e-147 527.3 466 58.4
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 3.4e-147 525.8 505 56.4
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 7.5e-147 524.6 399 66.2
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 9.8e-147 524.2 371 71.4
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 1.3e-146 523.9 389 68.9
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 4.9e-146 521.9 500 55.4
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 4.1e-145 518.8 477 57.4
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 6.0e-144 515.0 479 56.8
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 6.0e-144 515.0 448 59.6
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 1.7e-143 513.5 461 58.1
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 1.1e-142 510.8 520 52.9
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 9.5e-142 507.7 464 56.2
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 3.6e-141 505.8 434 59.7
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 1.1e-140 504.2 468 56.8
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 9.8e-139 497.7 453 55.2
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 1.7e-138 496.9 478 54.0
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 8.3e-138 494.6 450 56.2
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.4e-137 493.8 338 74.3
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 1.7e-135 486.9 465 55.3
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 5.1e-135 485.3 469 54.4
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 7.6e-131 471.5 377 62.1
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 2.9e-130 469.5 433 55.0
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 1.9e-129 466.8 362 66.6
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 1.6e-128 463.8 455 53.0
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.0e-127 461.1 495 49.9
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 3.6e-117 426.0 462 50.9
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 1.5e-115 420.6 456 51.3
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 3.8e-114 416.0 321 65.7
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 1.3e-111 407.5 463 50.1
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 1.1e-110 404.4 472 49.2
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 9.3e-105 384.8 350 57.7
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 9.3e-105 384.8 350 57.7
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 2.0e-99 367.1 338 58.0
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 4.6e-96 355.9 478 43.3
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 4.6e-96 355.9 406 48.8
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 6.7e-95 352.1 294 60.5
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 2.7e-88 330.1 269 61.7
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.6e-85 320.9 231 71.4
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 3.1e-84 316.6 235 67.7
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 1.2e-83 314.7 356 48.6
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 7.9e-80 302.0 434 45.9
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 2.6e-78 297.0 501 37.1
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 8.8e-71 271.9 452 39.8
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 1.0e-66 258.5 349 43.0
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 5.5e-65 252.7 377 43.2
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 5.9e-59 232.6 253 53.4
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 1.0e-58 231.9 300 43.7
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 1.4e-52 211.5 178 62.4
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 3.2e-49 200.3 160 62.5
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 3.2e-49 200.3 160 62.5
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 5.5e-49 199.5 196 53.6
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.5e-46 191.4 222 49.5
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 2.7e-43 180.6 174 56.9
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 1.0e-42 178.7 425 30.8
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 1.8e-36 157.9 147 56.5
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 5.4e-36 156.4 170 47.6
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 2.0e-35 154.5 148 53.4
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 3.1e-31 140.6 101 64.4
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 4.4e-30 136.7 116 59.5
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 6.4e-21 106.3 239 31.8
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 7.1e-20 102.8 67 74.6
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 6.6e-18 96.3 109 49.5
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 3.6e-16 90.5 106 49.1
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.5e-14 85.1 52 76.9
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.6e-14 84.3 52 76.9
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 2.7e-11 74.3 90 46.7


User provided reference genes

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