Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G2007 Durio zibethinus HOM05D007241 ORTHO05D009142 1.7e-191 672.5 345 100.0
Thecc.05G024800 Theobroma cacao HOM05D007241 ORTHO05D009142 5.1e-164 581.3 345 85.2
Duzib106G0374 Durio zibethinus HOM05D007241 ORTHO05D009142 2.1e-162 575.9 345 84.9
Gohir.D04G127300 Gossypium hirsutum HOM05D007241 ORTHO05D009142 6.2e-162 574.3 359 82.5
Gorai.012G110300 Gossypium raimondii HOM05D007241 ORTHO05D009142 1.4e-161 573.2 353 83.3
Gohir.A04G087000 Gossypium hirsutum HOM05D007241 ORTHO05D009142 1.8e-145 519.6 346 77.7
Cpa.g.sc56.88 Carica papaya HOM05D007241 ORTHO05D009142 7.4e-131 471.1 349 69.9
GSVIVG01034032001 Vitis vinifera HOM05D007241 ORTHO05D009142 1.4e-126 456.8 348 70.4
Ciclev10012141m.g Citrus clementina HOM05D007241 ORTHO05D009142 4.1e-121 438.7 350 68.0
CSS0004399 Camellia sinensis var. sinensis HOM05D007241 ORTHO05D009142 1.5e-120 436.8 353 67.4
Atru.chr8.2123 Acer truncatum HOM05D007241 ORTHO05D009142 2.9e-119 432.6 346 67.6
Potri.006G094800 Populus trichocarpa HOM05D007241 ORTHO05D009142 1.2e-117 427.2 351 65.8
PGR004G2498 Punica granatum HOM05D007241 ORTHO05D009142 1.6e-117 426.8 349 64.2
Haze_20925 Corylus avellana HOM05D007241 ORTHO05D009142 2.1e-117 426.4 348 66.1
Sabra06G0072600 Salix brachista HOM05D007241 ORTHO05D009142 7.9e-117 424.5 351 65.5
CiPaw.10G153200 Carya illinoinensis HOM05D007241 ORTHO05D009142 8.8e-116 421.0 349 66.2
TAR633G0637 Trochodendron aralioides HOM05D007241 ORTHO05D009142 5.3e-113 411.8 353 64.9
Prupe.6G268100 Prunus persica HOM05D007241 ORTHO05D009142 1.7e-111 406.8 345 62.9
Nn2g11326 Nelumbo nucifera HOM05D007241 ORTHO05D009142 2.2e-111 406.4 348 64.7
Eucgr.K03006 Eucalyptus grandis HOM05D007241 ORTHO05D009142 3.8e-111 405.6 352 62.8
Aa31LG3G1690 Aethionema arabicum HOM05D007241 ORTHO05D009142 7.2e-110 401.4 347 63.1
Hma1.2p1_0671F.1_g200780 Hydrangea macrophylla HOM05D007241 ORTHO05D009142 7.2e-110 401.4 341 64.2
Dinv35525 Davidia involucrata HOM05D007241 ORTHO05D009142 1.2e-109 400.6 327 67.0
MBI14_g28606_MAGBIO Magnolia biondii HOM05D007241 ORTHO05D009142 3.9e-108 395.6 348 63.8
Manes.08G083700 Manihot esculenta HOM05D007241 ORTHO05D009142 5.7e-107 391.7 350 62.0
Sp3g07590 Schrenkiella parvula HOM05D007241 ORTHO05D009142 1.3e-106 390.6 321 62.9
THA.LOC104823276 Tarenaya hassleriana HOM05D007241 ORTHO05D009142 1.3e-106 390.6 348 62.4
CARHR083550 Cardamine hirsuta HOM05D007241 ORTHO05D009142 2.8e-106 389.4 345 59.7
BcaC09g48056 Brassica carinata HOM05D007241 ORTHO05D009142 3.7e-106 389.0 343 61.5
CANSAT35G2041 Cannabis sativa HOM05D007241 ORTHO05D009142 3.7e-106 389.0 343 61.5
Sopen09g006650 Solanum pennellii HOM05D007241 ORTHO05D009142 3.7e-106 389.0 351 61.3
Solyc09g011830.4 Solanum lycopersicum HOM05D007241 ORTHO05D009142 8.2e-106 387.9 351 61.0
Carub.0003s0832 Capsella rubella HOM05D007241 ORTHO05D009142 2.4e-105 386.3 318 63.2
MELO3C003216.2 Cucumis melo HOM05D007241 ORTHO05D009142 2.4e-105 386.3 346 59.8
FAN05G2185 Fragaria x ananassa HOM05D007241 ORTHO05D009142 3.1e-105 386.0 349 61.3
Oeu015010.1 Olea europaea HOM05D007241 ORTHO05D009142 4.1e-105 385.6 327 63.0
Thhalv10021091m.g Eutrema salsugineum HOM05D007241 ORTHO05D009142 9.1e-105 384.4 322 61.8
BolC1t05471H Brassica oleracea HOM05D007241 ORTHO05D009142 1.2e-104 384.0 343 60.6
AL3G20320 Arabidopsis lyrata HOM05D007241 ORTHO05D009142 1.6e-104 383.6 349 59.9
BraA01t04312Z Brassica rapa HOM05D007241 ORTHO05D009142 1.6e-104 383.6 343 59.5
FAN02G0490 Fragaria x ananassa HOM05D007241 ORTHO05D009142 2.0e-104 383.3 349 60.7
Nitab4.5_0007671g0010 Nicotiana tabacum HOM05D007241 ORTHO05D009142 2.0e-104 383.3 348 59.8
TWI74G0988 Tripterygium wilfordii HOM05D007241 ORTHO05D009142 2.0e-104 383.3 354 61.0
FvH4_6g12350 Fragaria vesca HOM05D007241 ORTHO05D009142 2.6e-104 382.9 349 60.7
PGSC0003DMG400020362 Solanum tuberosum HOM05D007241 ORTHO05D009142 3.5e-104 382.5 352 59.1
Nitab4.5_0000008g0420 Nicotiana tabacum HOM05D007241 ORTHO05D009142 4.5e-104 382.1 352 59.9
Sed0022131 Sechium edule HOM05D007241 ORTHO05D009142 4.5e-104 382.1 345 59.4
BcaC09g48011 Brassica carinata HOM05D007241 ORTHO05D009142 7.7e-104 381.3 342 59.6
FAN14G0673 Fragaria x ananassa HOM05D007241 ORTHO05D009142 1.0e-103 380.9 348 60.6
ClCG04G007350 Citrullus lanatus HOM05D007241 ORTHO05D009142 2.2e-103 379.8 355 58.6
MSTRG.5609 Avicennia marina HOM05D007241 ORTHO05D009142 2.9e-103 379.4 347 59.7
Peaxi162Scf00427g00616 Petunia axillaris HOM05D007241 ORTHO05D009142 2.9e-103 379.4 347 59.7
AUR62015997 Chenopodium quinoa HOM05D007241 ORTHO05D009142 3.8e-103 379.0 346 59.5
Cc06_g01830 Coffea canephora HOM05D007241 ORTHO05D009142 6.5e-103 378.3 343 60.1
CAN.G1233.2 Capsicum annuum HOM05D007241 ORTHO05D009142 1.1e-102 377.5 353 58.9
AT3G09210 Arabidopsis thaliana HOM05D007241 ORTHO05D009142 1.9e-102 376.7 316 61.4
CsaV3_4G025900 Cucumis sativus L. HOM05D007241 ORTHO05D009142 2.5e-102 376.3 346 58.4
Lalb_Chr13g0291331 Lupinus albus HOM05D007241 ORTHO05D009142 3.2e-102 375.9 348 59.8
RcHm_v2.0_Chr3g0464151 Rosa chinensis HOM05D007241 ORTHO05D009142 1.6e-101 373.6 348 58.9
Ah.07g207300 Amaranthus hybridus HOM05D007241 ORTHO05D009142 4.7e-101 372.1 353 59.5
Lj3g0002129 Lotus japonicus HOM05D007241 ORTHO05D009142 1.0e-100 370.9 338 61.2
Glyma.01G109100 Glycine max HOM05D007241 ORTHO05D009142 5.2e-100 368.6 341 58.7
Sc22g0004510 Simmondsia chinensis HOM05D007241 ORTHO05D009142 3.7e-98 362.5 305 62.3
Aqoxy1G00764 Aquilegia oxysepala HOM05D007241 ORTHO05D009142 3.5e-96 355.9 350 58.3
MD04G1143600 Malus domestica HOM05D007241 ORTHO05D009142 7.7e-96 354.8 322 58.4
Psat7g241800 Pisum sativum HOM05D007241 ORTHO05D009142 5.0e-95 352.1 346 56.1
EL10Ac3g05675 Beta vulgaris HOM05D007241 ORTHO05D009142 1.5e-94 350.5 350 56.9
Migut.J00242 Erythranthe guttata HOM05D007241 ORTHO05D009142 1.5e-94 350.5 344 57.8
vmacro20223 Vaccinium macrocarpon HOM05D007241 ORTHO05D009142 4.2e-94 349.0 351 53.6
VMungo0331G1333 Vigna mungo HOM05D007241 ORTHO05D009142 1.6e-93 347.1 335 57.3
PSO063G4791 Papaver somniferum HOM05D007241 ORTHO05D009142 1.0e-92 344.4 295 62.4
Ca_20114_v3 Cicer arietinum L. HOM05D007241 ORTHO05D009142 1.4e-92 344.0 405 50.9
arahy.Tifrunner.gnm1.ann1.IV4I8P Arachis hypogaea HOM05D007241 ORTHO05D009142 8.8e-92 341.3 298 59.7
Phvul.010G006200 Phaseolus vulgaris HOM05D007241 ORTHO05D009142 8.8e-92 341.3 335 55.2
DCAR_010398 Daucus carota HOM05D007241 ORTHO05D009142 3.4e-91 339.3 390 50.5
SalBow3G1957 Salvia bowleyana HOM05D007241 ORTHO05D009142 3.4e-91 339.3 329 55.0
Actinidia13799 Actinidia chinensis HOM05D007241 ORTHO05D009142 1.7e-90 337.0 324 57.7
Medtr4g019060 Medicago truncatula HOM05D007241 ORTHO05D009142 1.4e-89 334.0 346 54.9
SGA_v2.0_scaffold85G26792 Striga asiatica HOM05D007241 ORTHO05D009142 7.0e-89 331.6 346 54.6
Hund04733 Selenicereus undatus HOM05D007241 ORTHO05D009142 2.2e-87 326.6 347 55.9
unitig_749.g14176 Utricularia gibba HOM05D007241 ORTHO05D009142 4.2e-86 322.4 341 52.2
Lsat_1_v5_gn_2_72881 Lactuca sativa HOM05D007241 ORTHO05D009142 7.2e-86 321.6 336 52.7
ATR0618G224 Amborella trichopoda HOM05D007241 ORTHO05D009142 2.6e-83 313.2 354 52.8
arahy.Tifrunner.gnm1.ann1.D4R6TJ Arachis hypogaea HOM05D007241 ORTHO05D009142 4.4e-83 312.4 345 51.3
HanXRQChr10g0300011 Helianthus annuus HOM05D007241 ORTHO05D009142 2.2e-82 310.1 320 50.6
ECA233G2042 Erigeron canadensis HOM05D007241 ORTHO05D009142 1.9e-78 297.0 289 51.9
Rhsim05G0202600 Rhododendron simsii HOM05D007241 ORTHO05D009142 2.8e-77 293.1 360 47.8
AUR62021204 Chenopodium quinoa HOM05D007241 ORTHO05D009142 3.7e-66 256.1 346 48.0
Os03g0825500 Oryza sativa ssp. japonica HOM05D007241 ORTHO05D009142 2.0e-64 250.4 312 45.8
HPP92_014289 Vanilla planifolia HOM05D007241 ORTHO05D009142 4.6e-64 249.2 247 51.4
CDE04G1578 Ceratophyllum demersum HOM05D007241 ORTHO05D009142 1.1e-60 238.0 222 56.3
TPR.G8187 Trifolium pratense HOM05D007241 ORTHO05D009142 6.4e-58 228.8 284 47.5
arahy.Tifrunner.gnm1.ann1.4L01Q9 Arachis hypogaea HOM05D007241 ORTHO05D009142 1.1e-57 228.0 208 56.7
Zm00001eb063100 Zea mays HOM05D007241 ORTHO05D009142 1.2e-56 224.6 294 43.9
COL.COLO4_14646 Corchorus olitorius HOM05D007241 ORTHO05D009142 2.7e-56 223.4 137 84.7
COL.COLO4_14645 Corchorus olitorius HOM05D007241 ORTHO05D009142 2.1e-48 197.2 131 80.9
MD12G1157800 Malus domestica HOM05D007241 ORTHO05D009142 1.3e-37 161.4 245 42.4
TPR.G40038 Trifolium pratense HOM05D007241 ORTHO05D009142 3.2e-33 146.7 96 68.8
Mapoly0003s0142 Marchantia polymorpha HOM05D007241 ORTHO05D009142 1.8e-31 141.0 294 31.6
Lj3A958T74 Lonicera japonica HOM05D007241 ORTHO05D009142 1.4e-28 131.3 143 55.2
Lj3A958T75 Lonicera japonica HOM05D007241 ORTHO05D009142 7.1e-25 119.0 124 51.6
BcaB05g24622 Brassica carinata HOM05D007241 ORTHO05D009142 8.7e-23 112.1 111 53.2
Pp3c24_19950 Physcomitrium patens HOM05D007241 ORTHO05D009142 4.3e-22 109.8 302 27.5
CBR_g25746 Chara braunii HOM05D000019 ORTHO05D000048 6.9e-20 102.4 318 25.5
SEGI_13087 Sequoiadendron giganteum HOM05D007241 ORTHO05D009142 6.3e-13 79.3 75 49.3
TAR629G1375 Trochodendron aralioides HOM05D007241 ORTHO05D009142 9.0e-12 75.5 59 67.8
FAN28G2275 Fragaria x ananassa HOM05D000356 ORTHO05D000265 5.9e-11 72.8 78 66.7


User provided reference genes

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