Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44807 Davidia involucrata HOM05D001026 ORTHO05D013938 1.7e-53 212.2 97 100.0
Hma1.2p1_0593F.1_g185790 Hydrangea macrophylla HOM05D001026 ORTHO05D003027 3.0e-45 184.9 94 88.3
Hma1.2p1_1613F.1_g293630 Hydrangea macrophylla HOM05D001026 ORTHO05D003027 3.0e-45 184.9 94 88.3
Nn5g29991 Nelumbo nucifera HOM05D001026 ORTHO05D003027 3.0e-45 184.9 94 86.2
DCAR_019290 Daucus carota HOM05D001026 ORTHO05D003027 2.1e-43 178.7 94 84.0
CANSAT64G2664 Cannabis sativa HOM05D001026 ORTHO05D003027 6.2e-43 177.2 94 83.0
Actinidia10346 Actinidia chinensis HOM05D001026 ORTHO05D003027 1.1e-42 176.4 94 85.1
Potri.002G100900 Populus trichocarpa HOM05D001026 ORTHO05D003027 1.4e-42 176.0 94 81.9
Duzib093G0557 Durio zibethinus HOM05D001026 ORTHO05D003027 1.8e-42 175.6 94 81.9
QL02p002313 Quercus lobata HOM05D001026 ORTHO05D003027 1.8e-42 175.6 95 83.2
Psat5g050480 Pisum sativum HOM05D001026 ORTHO05D003027 2.4e-42 175.3 96 78.1
GSVIVG01009087001 Vitis vinifera HOM05D001026 ORTHO05D003027 2.4e-42 175.3 96 83.3
CiPaw.15G045600 Carya illinoinensis HOM05D001026 ORTHO05D003027 4.0e-42 174.5 96 81.2
Atru.chr13.1115 Acer truncatum HOM05D001026 ORTHO05D003027 5.2e-42 174.1 95 80.0
Manes.18G063352 Manihot esculenta HOM05D001026 ORTHO05D003027 5.2e-42 174.1 94 81.9
TAR381G1146 Trochodendron aralioides HOM05D001026 ORTHO05D003027 9.0e-42 173.3 95 82.1
Ciclev10000347m.g Citrus clementina HOM05D001026 ORTHO05D003027 1.2e-41 172.9 93 80.6
Glyma.06G100600 Glycine max HOM05D001026 ORTHO05D003027 2.0e-41 172.2 96 77.1
FAN13G2529 Fragaria x ananassa HOM05D001026 ORTHO05D003027 3.4e-41 171.4 94 79.8
Gohir.A05G223500 Gossypium hirsutum HOM05D001026 ORTHO05D003027 3.4e-41 171.4 94 81.9
Gohir.D05G226200 Gossypium hirsutum HOM05D001026 ORTHO05D003027 3.4e-41 171.4 94 81.9
Gorai.009G233800 Gossypium raimondii HOM05D001026 ORTHO05D003027 3.4e-41 171.4 94 81.9
Medtr3g099500 Medicago truncatula HOM05D001026 ORTHO05D003027 3.4e-41 171.4 96 76.0
RcHm_v2.0_Chr7g0238421 Rosa chinensis HOM05D001026 ORTHO05D003027 3.4e-41 171.4 94 81.9
Haze_18256 Corylus avellana HOM05D001026 ORTHO05D003027 7.6e-41 170.2 94 81.9
FAN08G1116 Fragaria x ananassa HOM05D001026 ORTHO05D003027 7.6e-41 170.2 94 78.7
Ca_16037_v3 Cicer arietinum L. HOM05D001026 ORTHO05D003027 9.9e-41 169.9 96 76.0
ECA232G0643 Erigeron canadensis HOM05D001026 ORTHO05D003027 9.9e-41 169.9 94 80.9
Sabra02G0079100 Salix brachista HOM05D001026 ORTHO05D003027 9.9e-41 169.9 121 66.1
Eucgr.B00043 Eucalyptus grandis HOM05D001026 ORTHO05D003027 1.3e-40 169.5 94 79.8
Prupe.1G523500 Prunus persica HOM05D001026 ORTHO05D003027 1.3e-40 169.5 94 78.7
vmacro21287 Vaccinium macrocarpon HOM05D001026 ORTHO05D003027 2.2e-40 168.7 94 79.8
FvH4_5g36440 Fragaria vesca HOM05D001026 ORTHO05D003027 2.9e-40 168.3 94 78.7
FAN18G3833 Fragaria x ananassa HOM05D001026 ORTHO05D003027 2.9e-40 168.3 94 78.7
Cpa.g.sc36.185 Carica papaya HOM05D001026 ORTHO05D003027 3.8e-40 167.9 94 79.8
PSO447G0146 Papaver somniferum HOM05D001026 ORTHO05D003027 3.8e-40 167.9 95 77.9
PSO447G0299 Papaver somniferum HOM05D001026 ORTHO05D003027 3.8e-40 167.9 95 77.9
PSO447G0331 Papaver somniferum HOM05D001026 ORTHO05D003027 3.8e-40 167.9 95 77.9
TPR.G24224 Trifolium pratense HOM05D001026 ORTHO05D003027 3.8e-40 167.9 95 74.7
Cfa017894 Carpinus fangiana HOM05D001026 ORTHO05D005232 4.9e-40 167.5 94 78.7
MBI02_g10704_MAGBIO Magnolia biondii HOM05D001026 ORTHO05D003027 4.9e-40 167.5 94 76.6
CSS0005078 Camellia sinensis var. sinensis HOM05D001026 ORTHO05D003027 1.9e-39 165.6 94 78.7
CSS0022327 Camellia sinensis var. sinensis HOM05D001026 ORTHO05D003027 1.9e-39 165.6 94 78.7
Lsat_1_v5_gn_9_73901 Lactuca sativa HOM05D001026 ORTHO05D003027 1.9e-39 165.6 94 77.7
Rhsim06G0077600 Rhododendron simsii HOM05D001026 ORTHO05D003027 2.4e-39 165.2 93 78.5
CsaV3_3G047730 Cucumis sativus L. HOM05D001026 ORTHO05D003027 3.2e-39 164.9 95 73.7
Lalb_Chr23g0270251 Lupinus albus HOM05D001026 ORTHO05D003027 3.2e-39 164.9 97 75.3
Glyma.04G098900 Glycine max HOM05D001026 ORTHO05D003027 4.2e-39 164.5 95 73.7
ClCG11G014330 Citrullus lanatus HOM05D001026 ORTHO05D005232 5.4e-39 164.1 94 75.5
arahy.Tifrunner.gnm1.ann1.M8RGP5 Arachis hypogaea HOM05D001026 ORTHO05D003027 7.1e-39 163.7 94 76.6
arahy.Tifrunner.gnm1.ann1.T6QQUE Arachis hypogaea HOM05D001026 ORTHO05D003027 7.1e-39 163.7 94 76.6
Cc10_g06640 Coffea canephora HOM05D001026 ORTHO05D003027 7.1e-39 163.7 94 77.7
PSO700G0091 Papaver somniferum HOM05D001026 ORTHO05D003027 7.1e-39 163.7 95 76.8
Thecc.08G101600 Theobroma cacao HOM05D001026 ORTHO05D003027 7.1e-39 163.7 96 78.1
HanXRQChr09g0248901 Helianthus annuus HOM05D001026 ORTHO05D003027 3.5e-38 161.4 94 75.5
Lalb_Chr23g0270351 Lupinus albus HOM05D001026 ORTHO05D003027 3.5e-38 161.4 96 74.0
MD15G1376800 Malus domestica HOM05D001026 ORTHO05D003027 4.6e-38 161.0 94 74.5
VMungo1309G1798 Vigna mungo HOM05D001026 ORTHO05D003027 4.6e-38 161.0 96 69.8
EL10Ac1g01143 Beta vulgaris HOM05D001026 ORTHO05D003027 6.0e-38 160.6 94 75.5
Aqoxy6G00080 Aquilegia oxysepala HOM05D001026 ORTHO05D003027 7.8e-38 160.2 94 75.5
Migut.C00087 Erythranthe guttata HOM05D001026 ORTHO05D003027 1.3e-37 159.5 94 71.3
AUR62018975 Chenopodium quinoa HOM05D001026 ORTHO05D003027 1.7e-37 159.1 94 76.6
AUR62027816 Chenopodium quinoa HOM05D001026 ORTHO05D003027 1.7e-37 159.1 94 77.7
Phvul.009G033200 Phaseolus vulgaris HOM05D001026 ORTHO05D003027 1.7e-37 159.1 94 72.3
PGR031G3469 Punica granatum HOM05D001026 ORTHO05D003027 2.3e-37 158.7 94 75.5
Oeu029738.1 Olea europaea HOM05D001026 ORTHO05D003027 5.1e-37 157.5 94 73.4
AT4G09020 Arabidopsis thaliana HOM05D001026 ORTHO05D003027 8.7e-37 156.8 95 72.6
Hund26992 Selenicereus undatus HOM05D001026 ORTHO05D003027 1.1e-36 156.4 92 76.1
TWI56G0632 Tripterygium wilfordii HOM05D001026 ORTHO05D003027 1.1e-36 156.4 94 74.5
SGA_v2.0_scaffold74G24556 Striga asiatica HOM05D001026 ORTHO05D003027 1.5e-36 156.0 94 70.2
unitig_578.g16559 Utricularia gibba HOM05D001026 ORTHO05D003027 1.9e-36 155.6 94 67.0
MD08G1188900 Malus domestica HOM05D001026 ORTHO05D003027 2.5e-36 155.2 92 75.0
AL6G41470 Arabidopsis lyrata HOM05D001026 ORTHO05D003027 3.3e-36 154.8 95 71.6
Carub.0006s2761 Capsella rubella HOM05D001026 ORTHO05D003027 4.3e-36 154.5 95 72.6
THA.LOC104816575 Tarenaya hassleriana HOM05D001026 ORTHO05D003027 5.6e-36 154.1 95 74.7
CARHR260080 Cardamine hirsuta HOM05D001026 ORTHO05D003027 9.6e-36 153.3 95 69.5
Lj1g0013315 Lotus japonicus HOM05D001026 ORTHO05D003027 9.6e-36 153.3 96 72.9
Sc01g0000840 Simmondsia chinensis HOM05D001026 ORTHO05D003027 9.6e-36 153.3 94 73.4
Aa31LG9G14700 Aethionema arabicum HOM05D001026 ORTHO05D003027 1.3e-35 152.9 95 71.6
COL.COLO4_12004 Corchorus olitorius HOM05D001026 ORTHO05D003027 2.1e-35 152.1 119 63.9
Thhalv10028452m.g Eutrema salsugineum HOM05D001026 ORTHO05D003027 6.2e-35 150.6 95 70.5
ATR0684G064 Amborella trichopoda HOM05D001026 ORTHO05D003027 1.4e-34 149.4 95 71.6
Nitab4.5_0000017g0130 Nicotiana tabacum HOM05D001026 ORTHO05D003027 1.4e-34 149.4 94 71.3
Sp6g08550 Schrenkiella parvula HOM05D001026 ORTHO05D003027 1.4e-34 149.4 95 69.5
Nitab4.5_0004462g0010 Nicotiana tabacum HOM05D001026 ORTHO05D013938 4.0e-34 147.9 101 68.3
BcaB01g02825 Brassica carinata HOM05D001026 ORTHO05D003027 5.3e-34 147.5 94 68.1
PGSC0003DMG402007274 Solanum tuberosum HOM05D001026 ORTHO05D003027 6.9e-34 147.1 94 69.1
Peaxi162Scf00937g00013 Petunia axillaris HOM05D001026 ORTHO05D003027 1.2e-33 146.4 94 70.2
Sopen06g003990 Solanum pennellii HOM05D001026 ORTHO05D003027 2.0e-33 145.6 94 69.1
CAN.G81.7 Capsicum annuum HOM05D001026 ORTHO05D003027 2.6e-33 145.2 94 69.1
Sed0020974 Sechium edule HOM05D001026 ORTHO05D003027 3.4e-33 144.8 94 67.0
Zm00001eb315710 Zea mays HOM05D001026 ORTHO05D003027 3.4e-33 144.8 95 69.5
BcaC01g04738 Brassica carinata HOM05D001026 ORTHO05D003027 5.8e-33 144.1 94 66.0
C03p34310 Brassica napus HOM05D001026 ORTHO05D003027 5.8e-33 144.1 94 66.0
BolC3t15740H Brassica oleracea HOM05D001026 ORTHO05D003027 5.8e-33 144.1 94 66.0
HPP92_005984 Vanilla planifolia HOM05D001026 ORTHO05D003027 9.9e-33 143.3 95 68.4
A03p28380 Brassica napus HOM05D001026 ORTHO05D003027 2.9e-32 141.7 94 66.0
BraA03t12043Z Brassica rapa HOM05D001026 ORTHO05D003027 2.9e-32 141.7 94 66.0
Actinidia37311 Actinidia chinensis HOM05D001026 ORTHO05D013938 3.2e-31 138.3 75 84.0
AagrBONN_evm.TU.Sc2ySwM_344.2278 Anthoceros agrestis HOM05D001026 ORTHO05D003027 2.7e-30 135.2 94 60.6
CDE06G1501 Ceratophyllum demersum HOM05D001026 ORTHO05D003027 4.6e-30 134.4 91 61.5
Mapoly0118s0006 Marchantia polymorpha HOM05D001026 ORTHO05D003027 6.0e-30 134.0 95 62.1
Lj4C96G16 Lonicera japonica HOM05D001026 ORTHO05D003027 1.8e-29 132.5 100 63.0
Haze_18249 Corylus avellana HOM05D001026 ORTHO05D013938 1.9e-28 129.0 77 76.6
MCO08G089 Micromonas commoda HOM05D001026 ORTHO05D003027 6.9e-26 120.6 95 55.8
CBR_g494 Chara braunii HOM05D001026 ORTHO05D003027 7.6e-25 117.1 96 55.2
Cre03.g207713 Chlamydomonas reinhardtii HOM05D001026 ORTHO05D003027 9.9e-25 116.7 93 55.9
SMO171G0036 Selaginella moellendorffii HOM05D001026 ORTHO05D003027 1.3e-24 116.3 95 52.6
Pp3c3_14050 Physcomitrium patens HOM05D001026 ORTHO05D003027 1.7e-24 115.9 95 51.6
C05p62190 Brassica napus HOM05D001026 ORTHO05D013938 2.2e-24 115.5 98 60.2
Ah.05g169650 Amaranthus hybridus HOM05D001026 ORTHO05D003027 3.2e-23 111.7 116 50.9
SGA_v2.0_scaffold74G24565 Striga asiatica HOM05D001026 ORTHO05D003027 4.8e-19 97.8 59 66.1
PRCOL_00003870 Prasinoderma coloniale HOM05D001026 ORTHO05D003027 5.3e-18 94.4 94 46.8
SEGI_25885 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 7.6e-17 90.5 60 65.0
Solyc06g009220.4 Solanum lycopersicum HOM05D001026 ORTHO05D003027 2.2e-16 89.0 59 62.7
BraA08t32531Z Brassica rapa HOM05D001026 ORTHO05D013938 3.8e-16 88.2 86 58.1
AagrBONN_evm.TU.Sc2ySwM_117.482 Anthoceros agrestis HOM05D001026 ORTHO05D007776 8.7e-13 77.0 112 36.6
Mapoly0105s0013 Marchantia polymorpha HOM05D001026 ORTHO05D007776 1.9e-12 75.9 111 37.8
BolC8t47354H Brassica oleracea HOM05D001026 ORTHO05D013938 1.8e-10 69.3 94 44.7
Pp3c8_12820 Physcomitrium patens HOM05D001026 ORTHO05D007776 2.4e-10 68.9 110 33.6
BcaC07g37165 Brassica carinata HOM05D001026 ORTHO05D013938 3.1e-10 68.6 72 52.8
SalBow7G2792 Salvia bowleyana HOM05D001026 ORTHO05D003027 6.9e-10 67.4 45 66.7
A08p05140 Brassica napus HOM05D001026 ORTHO05D013938 1.2e-09 66.6 94 45.7
SMO143G0219 Selaginella moellendorffii HOM05D001026 ORTHO05D007776 1.5e-09 66.2 104 35.6
C08p05380 Brassica napus HOM05D001026 ORTHO05D013938 2.0e-09 65.9 94 44.7
unitig_747.g21274 Utricularia gibba HOM05D001026 ORTHO05D007776 2.0e-09 65.9 97 39.2
Cc08_g00630 Coffea canephora HOM05D001026 ORTHO05D007776 2.9e-08 62.0 113 33.6
Hund18056 Selenicereus undatus HOM05D001026 ORTHO05D007776 2.9e-08 62.0 103 35.0
Aqoxy2G03248 Aquilegia oxysepala HOM05D001026 ORTHO05D007776 3.8e-08 61.6 112 33.9
CBR_g22242 Chara braunii HOM05D001026 ORTHO05D007776 6.5e-08 60.8 71 43.7
BcaB01g02382 Brassica carinata HOM05D001026 ORTHO05D003027 1.1e-07 60.1 64 43.8
Solyc09g064800.3 Solanum lycopersicum HOM05D001026 ORTHO05D007776 1.4e-07 59.7 111 31.5
Sopen09g026500 Solanum pennellii HOM05D001026 ORTHO05D007776 1.4e-07 59.7 111 31.5
TPR.G18118 Trifolium pratense HOM05D001026 ORTHO05D007776 1.9e-07 59.3 101 34.7
Nitab4.5_0006180g0010 Nicotiana tabacum HOM05D001026 ORTHO05D007776 2.5e-07 58.9 112 31.2
PGR044G2410 Punica granatum HOM05D001026 ORTHO05D003027 2.5e-07 58.9 90 40.0
Nitab4.5_0007392g0010 Nicotiana tabacum HOM05D001026 ORTHO05D007776 3.2e-07 58.5 112 31.2
TWI32G1029 Tripterygium wilfordii HOM05D001026 ORTHO05D003027 4.2e-07 58.2 107 36.4
ECA247G0901 Erigeron canadensis HOM05D001026 ORTHO05D007776 7.2e-07 57.4 112 32.1
Migut.J00824 Erythranthe guttata HOM05D001026 ORTHO05D003027 7.2e-07 57.4 88 36.4
HanXRQChr05g0136381 Helianthus annuus HOM05D001026 ORTHO05D003027 7.2e-07 57.4 103 34.0
MBI17_g12003_MAGBIO Magnolia biondii HOM05D001026 ORTHO05D007776 7.2e-07 57.4 108 32.4
Pp3c14_11860 Physcomitrium patens HOM05D001026 ORTHO05D003027 7.2e-07 57.4 91 37.4
Psat3g063520 Pisum sativum HOM05D001026 ORTHO05D007776 7.2e-07 57.4 103 34.0
Nitab4.5_0000053g0170 Nicotiana tabacum HOM05D001026 ORTHO05D003027 9.3e-07 57.0 103 35.0
CAN.G79.69 Capsicum annuum HOM05D001026 ORTHO05D007776 1.6e-06 56.2 111 31.5
Ca_08568_v3 Cicer arietinum L. HOM05D001026 ORTHO05D007776 2.1e-06 55.8 101 34.7
Lj1g0013086 Lotus japonicus HOM05D001026 ORTHO05D007776 2.1e-06 55.8 103 34.0
Peaxi162Scf00104g00022 Petunia axillaris HOM05D001026 ORTHO05D007776 2.1e-06 55.8 112 31.2
Psat7g021960 Pisum sativum HOM05D001026 ORTHO05D003027 2.7e-06 55.5 88 36.4
Lsat_1_v5_gn_8_70320 Lactuca sativa HOM05D001026 ORTHO05D003027 3.6e-06 55.1 105 33.3
MCO12G264 Micromonas commoda HOM05D001026 ORTHO05D003027 3.6e-06 55.1 80 36.2
Cfa020723 Carpinus fangiana HOM05D001026 ORTHO05D003027 4.6e-06 54.7 75 40.0
AUR62033250 Chenopodium quinoa HOM05D001026 ORTHO05D003027 4.6e-06 54.7 106 35.8
Ca_17409_v3 Cicer arietinum L. HOM05D001026 ORTHO05D003027 4.6e-06 54.7 103 33.0
Nitab4.5_0008119g0010 Nicotiana tabacum HOM05D001026 ORTHO05D003027 4.6e-06 54.7 76 39.5
Sabra06G0052700 Salix brachista HOM05D001026 ORTHO05D003027 4.6e-06 54.7 75 40.0
TPR.G25465 Trifolium pratense HOM05D001026 ORTHO05D003027 4.6e-06 54.7 103 33.0
Zm00001eb199510 Zea mays HOM05D001026 ORTHO05D022183 4.6e-06 54.7 103 35.0
Aqoxy7G02694 Aquilegia oxysepala HOM05D001026 ORTHO05D003027 6.1e-06 54.3 103 35.0
CiPaw.15G154500 Carya illinoinensis HOM05D001026 ORTHO05D003027 6.1e-06 54.3 75 41.3
Lj2P1178T14 Lonicera japonica HOM05D001026 ORTHO05D007776 6.1e-06 54.3 114 32.5
PGSC0003DMG400020699 Solanum tuberosum HOM05D001026 ORTHO05D003027 6.1e-06 54.3 75 40.0
TAR362G0069 Trochodendron aralioides HOM05D001026 ORTHO05D007776 6.1e-06 54.3 117 28.2
Zm00001eb174590 Zea mays HOM05D001026 ORTHO05D003027 6.1e-06 54.3 103 35.9
arahy.Tifrunner.gnm1.ann1.TNRR0X Arachis hypogaea HOM05D001026 ORTHO05D003027 7.9e-06 53.9 103 34.0
CAN.G33.1 Capsicum annuum HOM05D001026 ORTHO05D003027 7.9e-06 53.9 75 40.0
CAN.G33.2 Capsicum annuum HOM05D001026 ORTHO05D003027 7.9e-06 53.9 75 40.0
PSO170G5814 Papaver somniferum HOM05D001026 ORTHO05D003027 7.9e-06 53.9 103 35.9
QL11p009474 Quercus lobata HOM05D001026 ORTHO05D003027 7.9e-06 53.9 103 35.0
RcHm_v2.0_Chr4g0398221 Rosa chinensis HOM05D001026 ORTHO05D003027 7.9e-06 53.9 75 40.0


User provided reference genes

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