Gene: Cc10_g06640
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc10_g06640
- Transcript Identifier Cc10_g06640.1
- Gene Type Coding gene
- Location chr10 : 5499425-5513399 : negative
Gene Family Information
- ID HOM05D001026
- #Genes/#Species 592/100
- Phylogenetic origin
- ID ORTHO05D003027
- #Genes/#Species 247/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- UniProtKB B9RJQ8
- UniProtKB E0CRQ1
- UniProtKB Q9M0S5
- UniProtKB P0A4Y4
- UniProtKB A4PIT0
- UniProtKB O04196
- id GSCOCG00034629001
Descriptions
- Description Isoamylase 3, chloroplastic
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0009660 | ISO | PLAZA Integrative Orthology | amyloplast organization | Os09g0469400 |
| GO:0005983 | ISO | PLAZA Integrative Orthology | starch catabolic process | AT4G09020 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0019156 | ISO | PLAZA Integrative Orthology | isoamylase activity | AT4G09020 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT4G09020 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G09020 |
| GO:0009501 | ISO | PLAZA Integrative Orthology | amyloplast | Os09g0469400 |
| GO:0009569 | ISO | PLAZA Integrative Orthology | chloroplast starch grain | AT4G09020 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013783 | Immunoglobulin-like fold |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR044505 | Glycogen debranching enzyme GlgX/isoamylase, N-terminal Early set domain |
| IPR013780 | Glycosyl hydrolase, all-beta |
| IPR004193 | Glycoside hydrolase, family 13, N-terminal |
| IPR006047 | Glycosyl hydrolase, family 13, catalytic domain |
| IPR014756 | Immunoglobulin E-set |
| Mapman id | Description |
|---|---|
| 3.2.3.3.2.1 | Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.isoamylase (ISA3) |