Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv43554 Davidia involucrata HOM05D001413 ORTHO05D180908 2.4e-53 212.2 136 100.0
Gohir.A13G109900 Gossypium hirsutum HOM05D001413 ORTHO05D001385 1.2e-07 60.5 38 78.9
Gohir.D13G112500 Gossypium hirsutum HOM05D001413 ORTHO05D001385 1.2e-07 60.5 38 78.9
Gorai.013G126300 Gossypium raimondii HOM05D001413 ORTHO05D001385 1.2e-07 60.5 38 78.9
Os07g0673500 Oryza sativa ssp. japonica HOM05D001413 ORTHO05D001385 4.5e-07 58.5 37 78.4
A02p24730 Brassica napus HOM05D001413 ORTHO05D001385 7.7e-07 57.8 39 71.8
BraA02t07460Z Brassica rapa HOM05D001413 ORTHO05D001385 7.7e-07 57.8 39 71.8
Aa31LG5G2070 Aethionema arabicum HOM05D001413 ORTHO05D001385 1.3e-06 57.0 39 71.8
BcaB01g02042 Brassica carinata HOM05D001413 ORTHO05D001385 1.3e-06 57.0 39 71.8
CARHR250700 Cardamine hirsuta HOM05D001413 ORTHO05D001385 1.3e-06 57.0 39 71.8
THA.LOC104825971 Tarenaya hassleriana HOM05D001413 ORTHO05D001385 1.3e-06 57.0 39 71.8
Zm00001eb130650 Zea mays HOM05D001413 ORTHO05D001385 1.3e-06 57.0 43 65.1
Dinv30820 Davidia involucrata HOM05D001413 ORTHO05D001385 1.7e-06 56.6 37 75.7
DCAR_020367 Daucus carota HOM05D001413 ORTHO05D001385 2.2e-06 56.2 39 71.8
AT1G02840 Arabidopsis thaliana HOM05D001413 ORTHO05D001385 2.9e-06 55.8 39 69.2
BcaC03g16125 Brassica carinata HOM05D001413 ORTHO05D001385 2.9e-06 55.8 39 69.2
BcaC03g16126 Brassica carinata HOM05D001413 ORTHO05D001385 2.9e-06 55.8 39 69.2
BcaNung04053 Brassica carinata HOM05D001413 ORTHO05D001385 2.9e-06 55.8 39 69.2
A09p01890 Brassica napus HOM05D001413 ORTHO05D001385 2.9e-06 55.8 39 69.2
C02p39020 Brassica napus HOM05D001413 ORTHO05D001385 2.9e-06 55.8 39 69.2
C09p01970 Brassica napus HOM05D001413 ORTHO05D001385 2.9e-06 55.8 39 69.2
BolC2t09914H Brassica oleracea HOM05D001413 ORTHO05D001385 2.9e-06 55.8 39 69.2
BolC9t53129H Brassica oleracea HOM05D001413 ORTHO05D001385 2.9e-06 55.8 39 69.2
BraA09t35840Z Brassica rapa HOM05D001413 ORTHO05D001385 2.9e-06 55.8 39 69.2
Carub.0001s0196 Capsella rubella HOM05D001413 ORTHO05D001385 2.9e-06 55.8 39 69.2
CARHR002180 Cardamine hirsuta HOM05D001413 ORTHO05D001385 2.9e-06 55.8 39 69.2
CARHR009010 Cardamine hirsuta HOM05D001413 ORTHO05D001385 2.9e-06 55.8 38 68.4
Thhalv10008507m.g Eutrema salsugineum HOM05D001413 ORTHO05D001385 2.9e-06 55.8 39 69.2
Thhalv10028867m.g Eutrema salsugineum HOM05D001413 ORTHO05D001385 2.9e-06 55.8 39 69.2
CBR_g12769 Chara braunii HOM05D001413 ORTHO05D001385 5.0e-06 55.1 37 73.0
DCAR_008980 Daucus carota HOM05D001413 ORTHO05D001385 5.0e-06 55.1 37 75.7
FAN02G3041 Fragaria x ananassa HOM05D001413 ORTHO05D001385 5.0e-06 55.1 37 70.3
Gohir.A11G016400 Gossypium hirsutum HOM05D001413 ORTHO05D001385 5.0e-06 55.1 37 75.7
Gohir.D11G016200 Gossypium hirsutum HOM05D001413 ORTHO05D001385 5.0e-06 55.1 37 75.7
Gorai.007G017000 Gossypium raimondii HOM05D001413 ORTHO05D001385 5.0e-06 55.1 37 75.7
Gorai.011G107200 Gossypium raimondii HOM05D001413 ORTHO05D001385 5.0e-06 55.1 35 77.1
Mapoly0017s0004 Marchantia polymorpha HOM05D001413 ORTHO05D001385 5.0e-06 55.1 37 73.0
MapolyY_A0024 Marchantia polymorpha HOM05D001413 ORTHO05D001385 5.0e-06 55.1 37 73.0
SEGI_12888 Sequoiadendron giganteum HOM05D001413 ORTHO05D001385 5.0e-06 55.1 37 73.0
Thecc.05G313700 Theobroma cacao HOM05D001413 ORTHO05D001385 5.0e-06 55.1 38 73.7
BcaB05g23631 Brassica carinata HOM05D001413 ORTHO05D001385 6.5e-06 54.7 37 73.0
CSS0000616 Camellia sinensis var. sinensis HOM05D001413 ORTHO05D001385 6.5e-06 54.7 37 75.7
CSS0047802 Camellia sinensis var. sinensis HOM05D001413 ORTHO05D001385 6.5e-06 54.7 37 75.7
Duzib128G0472 Durio zibethinus HOM05D001413 ORTHO05D001385 6.5e-06 54.7 38 73.7
Eucgr.K03474 Eucalyptus grandis HOM05D001413 ORTHO05D001385 6.5e-06 54.7 37 73.0
PGR044G2059 Punica granatum HOM05D001413 ORTHO05D001385 6.5e-06 54.7 37 73.0
Atru.chr2.76 Acer truncatum HOM05D001413 ORTHO05D001385 8.5e-06 54.3 38 73.7
FAN09G4056 Fragaria x ananassa HOM05D001413 ORTHO05D001385 8.5e-06 54.3 37 70.3
TWI56G1438 Tripterygium wilfordii HOM05D001413 ORTHO05D001385 8.5e-06 54.3 39 66.7
GSVIVG01031132001 Vitis vinifera HOM05D001413 ORTHO05D001385 8.5e-06 54.3 37 73.0
Zm00001eb285560 Zea mays HOM05D001413 ORTHO05D001385 8.5e-06 54.3 37 73.0


User provided reference genes

Program Settings