Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40883 Davidia involucrata HOM05D003885 ORTHO05D004623 4.5e-104 381.3 200 100.0
vmacro11612 Vaccinium macrocarpon HOM05D003885 ORTHO05D004623 3.1e-89 332.0 201 84.1
CSS0008032 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 1.2e-88 330.1 231 75.3
CSS0014433 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 1.2e-88 330.1 231 75.3
Actinidia30379 Actinidia chinensis HOM05D003885 ORTHO05D004623 4.5e-88 328.2 230 75.7
Rhsim06G0232400 Rhododendron simsii HOM05D003885 ORTHO05D004623 1.4e-86 323.2 246 71.1
TAR627G0008 Trochodendron aralioides HOM05D003885 ORTHO05D004623 1.6e-85 319.7 230 74.8
Haze_09860 Corylus avellana HOM05D003885 ORTHO05D004623 4.6e-85 318.2 230 72.6
CANSAT56G2895 Cannabis sativa HOM05D003885 ORTHO05D004623 7.9e-85 317.4 229 73.8
TAR629G2602 Trochodendron aralioides HOM05D003885 ORTHO05D004623 1.0e-84 317.0 228 74.1
Cfa016929 Carpinus fangiana HOM05D003885 ORTHO05D004623 1.8e-84 316.2 230 72.6
Nn1g07757 Nelumbo nucifera HOM05D003885 ORTHO05D004623 1.1e-83 313.5 230 73.9
Ah.06g181560 Amaranthus hybridus HOM05D003885 ORTHO05D004623 1.5e-83 313.2 233 72.1
TPR.G2621 Trifolium pratense HOM05D003885 ORTHO05D004623 1.5e-83 313.2 228 73.2
TWI39G1241 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 3.3e-83 312.0 226 71.7
HPP92_015188 Vanilla planifolia HOM05D003885 ORTHO05D004623 3.3e-83 312.0 232 73.7
Lj1C893G21 Lonicera japonica HOM05D003885 ORTHO05D004623 9.7e-83 310.5 214 79.4
Ah.13g073470 Amaranthus hybridus HOM05D003885 ORTHO05D004623 2.2e-82 309.3 235 71.1
COL.COLO4_07729 Corchorus olitorius HOM05D003885 ORTHO05D004623 2.2e-82 309.3 230 70.9
Lj4g0022976 Lotus japonicus HOM05D003885 ORTHO05D004623 3.7e-82 308.5 229 72.5
Psat0s1834g0040 Pisum sativum HOM05D003885 ORTHO05D004623 3.7e-82 308.5 227 73.1
Thecc.07G008300 Theobroma cacao HOM05D003885 ORTHO05D004623 3.7e-82 308.5 229 72.1
QL08p003216 Quercus lobata HOM05D003885 ORTHO05D004623 6.3e-82 307.8 230 73.0
THA.LOC104822723 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 8.2e-82 307.4 231 70.6
Lj1g0011673 Lotus japonicus HOM05D003885 ORTHO05D004623 1.1e-81 307.0 230 72.2
Duzib213G0370 Durio zibethinus HOM05D003885 ORTHO05D004623 1.4e-81 306.6 230 72.2
Gohir.D13G134400 Gossypium hirsutum HOM05D003885 ORTHO05D004623 1.4e-81 306.6 231 71.9
Potri.001G370366 Populus trichocarpa HOM05D003885 ORTHO05D004623 1.8e-81 306.2 231 71.9
Manes.03G143400 Manihot esculenta HOM05D003885 ORTHO05D004623 2.4e-81 305.8 231 71.9
Nitab4.5_0005478g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 2.4e-81 305.8 206 79.6
Gorai.013G150700 Gossypium raimondii HOM05D003885 ORTHO05D004623 4.1e-81 305.1 232 71.1
Gohir.A13G131100 Gossypium hirsutum HOM05D003885 ORTHO05D004623 5.3e-81 304.7 231 71.4
Cc05_g15250 Coffea canephora HOM05D003885 ORTHO05D004623 1.2e-80 303.5 230 71.3
Sc03g0011570 Simmondsia chinensis HOM05D003885 ORTHO05D004623 1.2e-80 303.5 233 72.1
PGR083G1050 Punica granatum HOM05D003885 ORTHO05D004623 2.0e-80 302.8 231 72.3
CiPaw.12G140300 Carya illinoinensis HOM05D003885 ORTHO05D004623 2.6e-80 302.4 229 71.6
ClCG10G004480 Citrullus lanatus HOM05D003885 ORTHO05D004623 2.6e-80 302.4 231 72.7
Medtr4g100970 Medicago truncatula HOM05D003885 ORTHO05D004623 2.6e-80 302.4 228 72.4
Peaxi162Scf00139g01026 Petunia axillaris HOM05D003885 ORTHO05D004623 2.6e-80 302.4 200 79.5
GSVIVG01014735001 Vitis vinifera HOM05D003885 ORTHO05D004623 2.6e-80 302.4 231 71.9
arahy.Tifrunner.gnm1.ann1.JC0UDE Arachis hypogaea HOM05D003885 ORTHO05D004623 3.4e-80 302.0 231 72.3
MBI11_g04749_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 5.9e-80 301.2 234 73.5
Os06g0106100 Oryza sativa ssp. japonica HOM05D003885 ORTHO05D004623 7.7e-80 300.8 231 69.7
TWI38G2335 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 7.7e-80 300.8 230 68.7
Atru.chr2.3832 Acer truncatum HOM05D003885 ORTHO05D004623 1.0e-79 300.4 230 70.9
Aa31LG8G410 Aethionema arabicum HOM05D003885 ORTHO05D004623 1.0e-79 300.4 231 68.4
Ciclev10009386m.g Citrus clementina HOM05D003885 ORTHO05D004623 1.0e-79 300.4 230 71.7
AL3G24950 Arabidopsis lyrata HOM05D003885 ORTHO05D004623 1.7e-79 299.7 231 68.4
AUR62035674 Chenopodium quinoa HOM05D003885 ORTHO05D004623 1.7e-79 299.7 203 78.3
Ca_21964_v3 Cicer arietinum L. HOM05D003885 ORTHO05D004623 1.7e-79 299.7 230 70.9
EL10Ac4g07536 Beta vulgaris HOM05D003885 ORTHO05D004623 2.2e-79 299.3 243 67.9
DCAR_019010 Daucus carota HOM05D003885 ORTHO05D004623 2.2e-79 299.3 228 72.4
VMungo0251G1810 Vigna mungo HOM05D003885 ORTHO05D004623 2.9e-79 298.9 229 72.5
ATR1153G045 Amborella trichopoda HOM05D003885 ORTHO05D004623 1.4e-78 296.6 232 71.6
Phvul.003G220300 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 1.4e-78 296.6 229 72.1
CsaV3_3G004310 Cucumis sativus L. HOM05D003885 ORTHO05D004623 1.9e-78 296.2 230 72.6
Glyma.17G141500 Glycine max HOM05D003885 ORTHO05D004623 2.5e-78 295.8 230 72.2
Prupe.6G027200 Prunus persica HOM05D003885 ORTHO05D004623 3.2e-78 295.4 230 69.6
Carub.0003s1256 Capsella rubella HOM05D003885 ORTHO05D004623 4.2e-78 295.0 231 66.2
Glyma.05G059200 Glycine max HOM05D003885 ORTHO05D004623 5.5e-78 294.7 230 72.2
AUR62017134 Chenopodium quinoa HOM05D003885 ORTHO05D004623 7.2e-78 294.3 229 69.9
Lsat_1_v5_gn_5_188801 Lactuca sativa HOM05D003885 ORTHO05D004623 7.2e-78 294.3 232 71.1
DCAR_003369 Daucus carota HOM05D003885 ORTHO05D004623 9.4e-78 293.9 228 72.4
Lalb_Chr16g0386671 Lupinus albus HOM05D003885 ORTHO05D004623 9.4e-78 293.9 229 69.0
AT3G13200 Arabidopsis thaliana HOM05D003885 ORTHO05D004623 1.6e-77 293.1 231 67.1
MELO3C014122.2 Cucumis melo HOM05D003885 ORTHO05D004623 1.6e-77 293.1 231 71.9
Hund01874 Selenicereus undatus HOM05D003885 ORTHO05D004623 2.1e-77 292.7 232 70.3
Zm00001eb119790 Zea mays HOM05D003885 ORTHO05D004623 2.1e-77 292.7 231 68.8
RcHm_v2.0_Chr3g0480061 Rosa chinensis HOM05D003885 ORTHO05D004623 2.7e-77 292.4 234 70.1
Hund01875 Selenicereus undatus HOM05D003885 ORTHO05D004623 2.7e-77 292.4 231 70.1
C05p54750 Brassica napus HOM05D003885 ORTHO05D004623 4.6e-77 291.6 233 66.1
BolC5t34149H Brassica oleracea HOM05D003885 ORTHO05D004623 4.6e-77 291.6 233 66.1
Thhalv10021450m.g Eutrema salsugineum HOM05D003885 ORTHO05D004623 6.1e-77 291.2 232 66.4
FAN14G2004 Fragaria x ananassa HOM05D003885 ORTHO05D004623 6.1e-77 291.2 233 69.1
Sed0017804 Sechium edule HOM05D003885 ORTHO05D004623 6.1e-77 291.2 229 71.2
Nitab4.5_0010643g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 7.9e-77 290.8 226 71.2
PGSC0003DMG400008684 Solanum tuberosum HOM05D003885 ORTHO05D004623 7.9e-77 290.8 233 68.7
A05p36370 Brassica napus HOM05D003885 ORTHO05D004623 1.0e-76 290.4 232 65.9
BraA05t22437Z Brassica rapa HOM05D003885 ORTHO05D004623 1.0e-76 290.4 232 65.9
CAN.G492.53 Capsicum annuum HOM05D003885 ORTHO05D004623 1.0e-76 290.4 230 70.4
THA.LOC104815689 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 1.0e-76 290.4 235 67.7
FAN09G2902 Fragaria x ananassa HOM05D003885 ORTHO05D004623 1.4e-76 290.0 234 68.8
THA.LOC104810295 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 1.4e-76 290.0 231 68.0
BcaB06g25479 Brassica carinata HOM05D003885 ORTHO05D004623 1.8e-76 289.7 232 65.9
Sp3g11380 Schrenkiella parvula HOM05D003885 ORTHO05D004623 1.8e-76 289.7 232 65.9
BolC1t05136H Brassica oleracea HOM05D003885 ORTHO05D004623 2.3e-76 289.3 232 65.5
CARHR087790 Cardamine hirsuta HOM05D003885 ORTHO05D004623 3.0e-76 288.9 231 65.8
FAN05G2176 Fragaria x ananassa HOM05D003885 ORTHO05D004623 3.0e-76 288.9 234 68.4
A01p40350 Brassica napus HOM05D003885 ORTHO05D004623 5.1e-76 288.1 232 65.5
BraA01t04070Z Brassica rapa HOM05D003885 ORTHO05D004623 5.1e-76 288.1 232 65.5
MD03G1032500 Malus domestica HOM05D003885 ORTHO05D004623 6.7e-76 287.7 232 68.1
Sopen07g033990 Solanum pennellii HOM05D003885 ORTHO05D004623 6.7e-76 287.7 230 70.4
A03p38080 Brassica napus HOM05D003885 ORTHO05D004623 8.8e-76 287.3 232 65.5
BraA03t12961Z Brassica rapa HOM05D003885 ORTHO05D004623 8.8e-76 287.3 232 65.5
Duzib170G0277 Durio zibethinus HOM05D003885 ORTHO05D004623 1.1e-75 287.0 225 69.3
BolC3t16892H Brassica oleracea HOM05D003885 ORTHO05D004623 1.5e-75 286.6 232 65.5
MD11G1036400 Malus domestica HOM05D003885 ORTHO05D004623 1.5e-75 286.6 232 67.7
BcaB04g18746 Brassica carinata HOM05D003885 ORTHO05D004623 2.0e-75 286.2 230 65.7
FvH4_6g22570 Fragaria vesca HOM05D003885 ORTHO05D004623 2.0e-75 286.2 233 68.2
FAN14G0574 Fragaria x ananassa HOM05D003885 ORTHO05D004623 2.0e-75 286.2 233 68.2
C01p51880 Brassica napus HOM05D003885 ORTHO05D004623 2.6e-75 285.8 232 65.9
ECA246G5298 Erigeron canadensis HOM05D003885 ORTHO05D004623 2.6e-75 285.8 229 69.4
Aqoxy3G02916 Aquilegia oxysepala HOM05D003885 ORTHO05D004623 3.3e-75 285.4 233 69.5
Solyc10g005800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 7.4e-75 284.3 234 67.1
Sopen10g001770 Solanum pennellii HOM05D003885 ORTHO05D004623 7.4e-75 284.3 234 67.1
Hma1.2p1_0193F.1_g083890 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 1.3e-74 283.5 284 59.5
SalBow2G3065 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.3e-74 283.5 215 72.1
Zm00001eb338740 Zea mays HOM05D003885 ORTHO05D004623 2.8e-74 282.3 230 66.5
MSTRG.14500 Avicennia marina HOM05D003885 ORTHO05D004623 3.7e-74 282.0 230 69.1
PGSC0003DMG400022160 Solanum tuberosum HOM05D003885 ORTHO05D004623 3.1e-73 278.9 237 67.9
Lalb_Chr05g0221281 Lupinus albus HOM05D003885 ORTHO05D004623 1.2e-72 276.9 229 65.5
BcaC05g29203 Brassica carinata HOM05D003885 ORTHO05D004623 4.5e-72 275.0 233 63.9
PSO210G1946 Papaver somniferum HOM05D003885 ORTHO05D004623 7.7e-72 274.2 228 65.8
PSO210G5551 Papaver somniferum HOM05D003885 ORTHO05D004623 7.7e-72 274.2 227 66.1
Sed0004751 Sechium edule HOM05D003885 ORTHO05D004623 7.7e-72 274.2 225 69.8
Phvul.008G217400 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 1.0e-71 273.9 220 68.2
Eucgr.F02030 Eucalyptus grandis HOM05D003885 ORTHO05D004623 1.3e-71 273.5 232 64.7
Oeu039420.1 Olea europaea HOM05D003885 ORTHO05D004623 1.7e-71 273.1 225 68.9
SalBow2G0786 Salvia bowleyana HOM05D003885 ORTHO05D004623 5.0e-71 271.6 228 67.5
Sabra16G0243800 Salix brachista HOM05D003885 ORTHO05D004623 1.4e-70 270.0 251 61.4
HanXRQChr05g0160321 Helianthus annuus HOM05D003885 ORTHO05D004623 2.5e-70 269.2 229 66.8
SalBow8G3434 Salvia bowleyana HOM05D003885 ORTHO05D004623 2.5e-70 269.2 228 67.5
SalBow2G1425 Salvia bowleyana HOM05D003885 ORTHO05D004623 3.2e-70 268.9 228 67.1
Lsat_1_v5_gn_5_2000 Lactuca sativa HOM05D003885 ORTHO05D004623 4.2e-70 268.5 271 58.7
MSTRG.13030 Avicennia marina HOM05D003885 ORTHO05D004623 9.4e-70 267.3 231 66.2
HanXRQChr08g0233271 Helianthus annuus HOM05D003885 ORTHO05D004623 9.4e-70 267.3 229 66.4
SalBow2G3218 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.6e-69 266.5 228 66.7
Migut.M01631 Erythranthe guttata HOM05D003885 ORTHO05D004623 4.7e-69 265.0 227 65.6
Mapoly0072s0064 Marchantia polymorpha HOM05D003885 ORTHO05D004623 8.8e-68 260.8 230 65.7
unitig_61.g26133 Utricularia gibba HOM05D003885 ORTHO05D004623 3.3e-67 258.8 232 65.5
FAN02G3468 Fragaria x ananassa HOM05D003885 ORTHO05D004623 4.4e-67 258.5 214 69.2
Pp3c5_15120 Physcomitrium patens HOM05D003885 ORTHO05D004623 5.7e-67 258.1 230 63.9
unitig_0.g990 Utricularia gibba HOM05D003885 ORTHO05D004623 1.7e-66 256.5 232 64.2
C03p46210 Brassica napus HOM05D003885 ORTHO05D004623 5.3e-65 251.5 232 60.3
Nitab4.5_0003328g0110 Nicotiana tabacum HOM05D003885 ORTHO05D004623 5.9e-64 248.1 233 63.5
AagrBONN_evm.TU.Sc2ySwM_228.690 Anthoceros agrestis HOM05D003885 ORTHO05D004623 1.7e-63 246.5 228 61.0
CBR_g58788 Chara braunii HOM05D003885 ORTHO05D004623 2.5e-62 242.7 230 60.9
Nitab4.5_0000152g0340 Nicotiana tabacum HOM05D003885 ORTHO05D004623 1.9e-54 216.5 252 54.0
SHI27704 Sapria himalayana HOM05D003885 ORTHO05D004623 1.9e-54 216.5 186 62.9
Actinidia10568 Actinidia chinensis HOM05D003885 ORTHO05D004623 3.2e-54 215.7 185 66.5
CSS0032461 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 2.8e-50 202.6 187 63.1
SMO356G0623 Selaginella moellendorffii HOM05D003885 ORTHO05D004623 4.8e-50 201.8 237 53.2
Hma1.2p1_0133F.1_g061250 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 3.1e-49 199.1 121 84.3
CSS0035354 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 2.7e-48 196.1 215 56.3
Nn1g07559 Nelumbo nucifera HOM05D003885 ORTHO05D004623 4.2e-46 188.7 121 77.7
CSS0021051 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 7.2e-46 188.0 121 79.3
TPR.G37597 Trifolium pratense HOM05D003885 ORTHO05D004623 1.6e-45 186.8 121 78.5
SGA_v2.0_scaffold8G04417 Striga asiatica HOM05D003885 ORTHO05D004623 4.0e-44 182.2 120 79.2
SalBow2G0143 Salvia bowleyana HOM05D003885 ORTHO05D004623 2.8e-42 176.0 113 81.4
Cre24.g755447 Chlamydomonas reinhardtii HOM05D003885 ORTHO05D004623 3.7e-42 175.6 236 47.0
SalBow2G2880 Salvia bowleyana HOM05D003885 ORTHO05D004623 3.7e-42 175.6 113 81.4
MCO14G028 Micromonas commoda HOM05D003885 ORTHO05D004623 5.4e-41 171.8 233 48.9
SalBow2G2704 Salvia bowleyana HOM05D003885 ORTHO05D004623 5.4e-41 171.8 113 79.6
RcHm_v2.0_Chr1g0318721 Rosa chinensis HOM05D003885 ORTHO05D004623 3.0e-36 156.0 123 69.1
Solyc07g065800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 4.4e-35 152.1 155 59.4
arahy.Tifrunner.gnm1.ann1.BGFV7A Arachis hypogaea HOM05D003885 ORTHO05D004623 2.9e-34 149.4 85 88.2
Hma1.2p1_0133F.1_g061260 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 8.3e-34 147.9 85 88.2
MBI19_g41323_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 1.1e-30 137.5 81 84.0
TPR.G37600 Trifolium pratense HOM05D003885 ORTHO05D004623 2.5e-30 136.3 76 86.8
BcaC01g04006 Brassica carinata HOM05D003885 ORTHO05D004623 3.1e-28 129.4 86 75.6
CAN.G1427.13 Capsicum annuum HOM05D000822 ORTHO05D004949 6.8e-28 128.3 132 58.3
SalBow8G5188 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.1e-25 120.9 162 51.2
Zm00001eb157240 Zea mays HOM05D003885 ORTHO05D004623 3.5e-24 115.9 78 74.4
PRCOL_00003569 Prasinoderma coloniale HOM05D003885 ORTHO05D004623 5.0e-23 112.1 200 42.5
RcHm_v2.0_Chr3g0468911 Rosa chinensis HOM05D003885 ORTHO05D004623 1.9e-22 110.2 197 40.6
BcaB04g21002 Brassica carinata HOM05D003885 ORTHO05D004623 8.1e-21 104.8 101 58.4
MCO14G027 Micromonas commoda HOM05D003885 ORTHO05D004623 1.1e-20 104.4 177 44.1
COL.COLO4_09698 Corchorus olitorius HOM05D003885 ORTHO05D004623 2.3e-20 103.2 101 58.4
C05p54720 Brassica napus HOM05D003885 ORTHO05D004623 1.5e-19 100.5 83 65.1
ATR0733G199 Amborella trichopoda HOM05D003885 ORTHO05D004623 2.4e-17 93.2 73 71.2
ATR0733G138 Amborella trichopoda HOM05D003885 ORTHO05D004623 4.6e-16 89.0 44 95.5
Lsat_1_v5_gn_8_106160 Lactuca sativa HOM05D003885 ORTHO05D004623 7.8e-16 88.2 56 78.6
PSO384G2596 Papaver somniferum HOM05D003885 ORTHO05D004623 1.1e-09 67.8 60 58.3
CSS0038981 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 1.4e-09 67.4 82 54.9
Haze_27574 Corylus avellana HOM05D003885 ORTHO05D164292 1.3e-07 60.8 106 38.7
CSS0001317 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 1.7e-07 60.5 89 49.4


User provided reference genes

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