Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40666 Davidia involucrata HOM05D005873 ORTHO05D007582 0.0e+00 1169.1 564 100.0
Dinv04615 Davidia involucrata HOM05D005873 ORTHO05D007582 3.5e-311 1070.8 562 92.0
CSS0049485 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 1.6e-292 1008.8 560 86.1
GSVIVG01021202001 Vitis vinifera HOM05D005873 ORTHO05D007582 2.8e-289 998.0 562 85.4
CSS0045323 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 1.6e-284 982.2 560 84.5
TAR627G0247 Trochodendron aralioides HOM05D005873 ORTHO05D007582 4.9e-281 970.7 562 82.9
Prupe.4G060100 Prunus persica HOM05D005873 ORTHO05D007582 8.6e-278 959.9 556 81.8
COL.COLO4_05490 Corchorus olitorius HOM05D005873 ORTHO05D007582 1.6e-276 955.7 562 79.5
CiPaw.10G058200 Carya illinoinensis HOM05D005873 ORTHO05D007582 2.1e-276 955.3 562 80.4
CANSAT35G0525 Cannabis sativa HOM05D005873 ORTHO05D007582 1.2e-274 949.5 562 80.1
Thecc.06G172000 Theobroma cacao HOM05D005873 ORTHO05D007582 1.2e-274 949.5 562 79.5
Duzib192G0329 Durio zibethinus HOM05D005873 ORTHO05D007582 9.8e-274 946.4 562 80.2
DCAR_028009 Daucus carota HOM05D005873 ORTHO05D007582 2.2e-273 945.3 560 80.5
TWI38G0673 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 7.0e-272 940.3 562 79.2
Gorai.009G163500 Gossypium raimondii HOM05D005873 ORTHO05D007582 9.2e-272 939.9 562 79.5
Nn1g09089 Nelumbo nucifera HOM05D005873 ORTHO05D007582 2.0e-271 938.7 562 80.2
MD10G1281000 Malus domestica HOM05D005873 ORTHO05D007582 6.6e-270 933.7 557 79.9
Gohir.D05G158500 Gossypium hirsutum HOM05D005873 ORTHO05D007582 8.6e-270 933.3 562 79.2
Nn1g04384 Nelumbo nucifera HOM05D005873 ORTHO05D007582 1.9e-269 932.2 562 79.7
Gohir.A05G155800 Gossypium hirsutum HOM05D005873 ORTHO05D007582 3.3e-269 931.4 562 78.8
Ciclev10014429m.g Citrus clementina HOM05D005873 ORTHO05D007582 4.3e-269 931.0 556 79.7
MD05G1302300 Malus domestica HOM05D005873 ORTHO05D007582 5.6e-269 930.6 557 79.0
RcHm_v2.0_Chr5g0010641 Rosa chinensis HOM05D005873 ORTHO05D007582 7.3e-269 930.2 562 78.8
Lj1C1193T7 Lonicera japonica HOM05D005873 ORTHO05D007582 9.5e-269 929.9 561 79.9
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 2.3e-267 925.2 547 80.1
Oeu039925.1 Olea europaea HOM05D005873 ORTHO05D007582 6.8e-267 923.7 562 79.4
TWI63G0032 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 5.8e-266 920.6 562 77.6
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea HOM05D005873 ORTHO05D007582 4.9e-265 917.5 556 78.1
QL05p046535 Quercus lobata HOM05D005873 ORTHO05D007582 1.1e-264 916.4 563 78.2
SalBow8G4573 Salvia bowleyana HOM05D005873 ORTHO05D007582 1.1e-264 916.4 558 78.5
Peaxi162Scf00010g03612 Petunia axillaris HOM05D005873 ORTHO05D007582 1.4e-264 916.0 555 77.3
Solyc11g068930.3 Solanum lycopersicum HOM05D005873 ORTHO05D007582 1.2e-263 912.9 562 76.5
FAN21G0636 Fragaria x ananassa HOM05D005873 ORTHO05D007582 2.7e-263 911.8 565 78.2
Aqoxy4G00415 Aquilegia oxysepala HOM05D005873 ORTHO05D007582 1.3e-262 909.4 554 80.1
Migut.M01045 Erythranthe guttata HOM05D005873 ORTHO05D007582 3.0e-262 908.3 563 78.0
Lj3g0011702 Lotus japonicus HOM05D005873 ORTHO05D007582 3.9e-262 907.9 563 76.7
Lalb_Chr03g0024111 Lupinus albus HOM05D005873 ORTHO05D007582 8.6e-262 906.7 554 77.8
MSTRG.16147 Avicennia marina HOM05D005873 ORTHO05D007582 2.5e-261 905.2 563 77.6
Sc17g0005780 Simmondsia chinensis HOM05D005873 ORTHO05D007582 3.3e-261 904.8 556 77.0
PGSC0003DMG400019634 Solanum tuberosum HOM05D005873 ORTHO05D007582 3.3e-261 904.8 562 76.0
Ca_21328_v3 Cicer arietinum L. HOM05D005873 ORTHO05D007582 7.3e-261 903.7 553 77.9
FAN11G2228 Fragaria x ananassa HOM05D005873 ORTHO05D007582 7.3e-261 903.7 565 78.4
Rhsim13G0191000 Rhododendron simsii HOM05D005873 ORTHO05D007582 1.6e-260 902.5 579 76.7
FvH4_3g07910 Fragaria vesca HOM05D005873 ORTHO05D007582 2.8e-260 901.7 565 78.1
Sopen11g027640 Solanum pennellii HOM05D005873 ORTHO05D007582 6.2e-260 900.6 562 75.8
FAN16G2124 Fragaria x ananassa HOM05D005873 ORTHO05D007582 4.0e-259 897.9 565 77.7
CAN.G689.28 Capsicum annuum HOM05D005873 ORTHO05D007582 6.8e-259 897.1 562 76.0
Eucgr.B01514 Eucalyptus grandis HOM05D005873 ORTHO05D007582 1.5e-258 896.0 558 75.3
TPR.G8345 Trifolium pratense HOM05D005873 ORTHO05D007582 2.6e-258 895.2 563 76.9
VMungo1127G0781 Vigna mungo HOM05D005873 ORTHO05D007582 7.5e-258 893.6 552 77.5
PGR004G0809 Punica granatum HOM05D005873 ORTHO05D007582 1.3e-257 892.9 559 75.8
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea HOM05D005873 ORTHO05D007582 2.2e-257 892.1 553 76.7
Glyma.12G010000 Glycine max HOM05D005873 ORTHO05D007582 2.9e-257 891.7 553 77.4
Lsat_1_v5_gn_7_23000 Lactuca sativa HOM05D005873 ORTHO05D007582 4.9e-257 891.0 567 75.7
PSO541G6035 Papaver somniferum HOM05D005873 ORTHO05D007582 1.4e-256 889.4 572 77.3
Sed0012124 Sechium edule HOM05D005873 ORTHO05D007582 9.2e-256 886.7 560 75.0
Phvul.011G010700 Phaseolus vulgaris HOM05D005873 ORTHO05D007582 1.6e-255 885.9 552 77.0
ClCG01G023710 Citrullus lanatus HOM05D005873 ORTHO05D007582 2.7e-255 885.2 561 75.2
Medtr0003s0540 Medicago truncatula HOM05D005873 ORTHO05D007582 6.0e-255 884.0 553 75.9
ECA236G1606 Erigeron canadensis HOM05D005873 ORTHO05D007582 7.8e-255 883.6 562 75.6
PSO675G7532 Papaver somniferum HOM05D005873 ORTHO05D007582 1.7e-254 882.5 572 76.4
Sabra04G0036300 Salix brachista HOM05D005873 ORTHO05D007582 9.5e-253 876.7 555 75.7
Potri.004G055600 Populus trichocarpa HOM05D005873 ORTHO05D007582 1.2e-252 876.3 555 75.1
MELO3C007214.2 Cucumis melo HOM05D005873 ORTHO05D007582 2.0e-250 869.0 594 71.2
Nitab4.5_0003937g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 3.2e-248 861.7 584 71.9
CsaV3_6G050860 Cucumis sativus L. HOM05D005873 ORTHO05D007582 6.0e-247 857.4 557 73.6
Nitab4.5_0000158g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 1.4e-243 846.3 517 77.9
AUR62036593 Chenopodium quinoa HOM05D005873 ORTHO05D007582 3.4e-242 841.6 556 71.8
Hund21181 Selenicereus undatus HOM05D005873 ORTHO05D007582 7.6e-242 840.5 558 71.0
THA.LOC104806153 Tarenaya hassleriana HOM05D005873 ORTHO05D007582 4.9e-241 837.8 565 70.6
Cc11_g13830 Coffea canephora HOM05D005873 ORTHO05D007582 6.4e-241 837.4 560 72.5
FAN25G0256 Fragaria x ananassa HOM05D005873 ORTHO05D007582 8.4e-241 837.0 584 71.4
Aa31LG9G7130 Aethionema arabicum HOM05D005873 ORTHO05D007582 1.4e-240 836.3 563 71.8
MBI06_g25992_MAGBIO Magnolia biondii HOM05D005873 ORTHO05D007582 1.2e-239 833.2 563 72.8
Sp2g10820 Schrenkiella parvula HOM05D005873 ORTHO05D007582 1.2e-239 833.2 562 71.2
Thhalv10000804m.g Eutrema salsugineum HOM05D005873 ORTHO05D007582 1.3e-238 829.7 553 71.4
Ah.14g087180 Amaranthus hybridus HOM05D005873 ORTHO05D007582 2.3e-238 828.9 556 70.5
CARHR176060 Cardamine hirsuta HOM05D005873 ORTHO05D007582 7.3e-237 823.9 561 70.6
HanXRQChr13g0397371 Helianthus annuus HOM05D005873 ORTHO05D007582 1.6e-236 822.8 563 70.9
AL8G12650 Arabidopsis lyrata HOM05D005873 ORTHO05D007582 2.8e-236 822.0 561 70.9
A02p29440 Brassica napus HOM05D005873 ORTHO05D007582 2.4e-235 818.9 553 71.1
C02p46710 Brassica napus HOM05D005873 ORTHO05D007582 2.4e-235 818.9 553 70.9
BraA02t07971Z Brassica rapa HOM05D005873 ORTHO05D007582 6.9e-235 817.4 553 71.1
HanXRQChr05g0156521 Helianthus annuus HOM05D005873 ORTHO05D007582 9.0e-235 817.0 562 70.5
AT5G45900 Arabidopsis thaliana HOM05D005873 ORTHO05D007582 2.9e-233 812.0 561 70.2
EL10Ac8g20512 Beta vulgaris HOM05D005873 ORTHO05D007582 6.4e-233 810.8 628 63.9
BolC2t10723H Brassica oleracea HOM05D005873 ORTHO05D007582 8.4e-233 810.4 554 70.6
Atru.chr10.1680 Acer truncatum HOM05D005873 ORTHO05D007582 7.9e-231 803.9 484 79.3
ATR0733G019 Amborella trichopoda HOM05D005873 ORTHO05D007582 3.0e-230 802.0 553 69.8
BcaC03g16799 Brassica carinata HOM05D005873 ORTHO05D007582 3.3e-229 798.5 554 70.0
Carub.0008s0205 Capsella rubella HOM05D005873 ORTHO05D007582 5.6e-221 771.2 560 67.1
Psat7g197320 Pisum sativum HOM05D005873 ORTHO05D007582 1.0e-217 760.4 552 69.7
AUR62031177 Chenopodium quinoa HOM05D005873 ORTHO05D007582 3.8e-217 758.4 557 66.6
vmacro01547 Vaccinium macrocarpon HOM05D005873 ORTHO05D007582 5.7e-213 744.6 563 67.5
SEGI_08778 Sequoiadendron giganteum HOM05D005873 ORTHO05D007582 2.6e-210 735.7 570 63.9
SGA_v2.0_scaffold1G00037 Striga asiatica HOM05D005873 ORTHO05D007582 3.7e-204 715.3 563 65.5
Eucgr.B01507 Eucalyptus grandis HOM05D005873 ORTHO05D007582 1.4e-187 660.2 445 72.1
Manes.17G054900 Manihot esculenta HOM05D005873 ORTHO05D007582 1.3e-185 653.7 397 78.6
Haze_06243 Corylus avellana HOM05D005873 ORTHO05D007582 8.2e-180 634.4 380 78.4
AagrBONN_evm.TU.Sc2ySwM_117.2340 Anthoceros agrestis HOM05D005873 ORTHO05D007582 4.8e-172 608.6 555 55.5
Mapoly0015s0071 Marchantia polymorpha HOM05D005873 ORTHO05D007582 4.7e-167 592.0 490 60.0
CSS0029481 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 1.2e-165 587.4 589 56.5
Cpa.g.sc7.54 Carica papaya HOM05D005873 ORTHO05D007582 1.5e-165 587.0 373 75.1
Pp3c24_8100 Physcomitrium patens HOM05D005873 ORTHO05D007582 7.0e-163 578.2 552 53.4
Os01g0614900 Oryza sativa ssp. japonica HOM05D005873 ORTHO05D007582 5.0e-145 518.8 562 49.8
CBR_g39927 Chara braunii HOM05D005873 ORTHO05D007582 1.5e-141 507.3 734 40.9
SMO367G0884 Selaginella moellendorffii HOM05D005873 ORTHO05D007582 2.6e-141 506.5 554 47.5
CBR_g50802 Chara braunii HOM05D005873 ORTHO05D007582 2.4e-139 500.0 731 40.1
MCO13G516 Micromonas commoda HOM05D005873 ORTHO05D007582 2.0e-125 453.8 584 44.0
PRCOL_00005698 Prasinoderma coloniale HOM05D005873 ORTHO05D007582 3.2e-107 393.3 587 40.7
Cfa025052 Carpinus fangiana HOM05D005873 ORTHO05D007582 1.5e-101 374.4 598 39.1
CDE08G0418 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 3.8e-100 369.8 264 70.8
Haze_26854 Corylus avellana HOM05D005873 ORTHO05D007582 5.5e-99 365.9 581 37.5
Cre03.g165215 Chlamydomonas reinhardtii HOM05D005873 ORTHO05D007582 1.8e-97 360.9 695 35.8
CDE08G0836 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 3.3e-80 303.5 201 73.1
Zm00001eb358160 Zea mays HOM05D005873 ORTHO05D007582 1.7e-63 248.1 212 60.8
CDE02G2814 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 4.1e-62 243.4 164 70.7
Actinidia16800 Actinidia chinensis HOM05D005873 ORTHO05D007582 1.2e-56 225.3 184 66.3
TPR.G23454 Trifolium pratense HOM05D001972 ORTHO05D002555 2.6e-56 224.2 132 81.8
SHI28554 Sapria himalayana HOM05D005873 ORTHO05D007582 8.9e-41 172.6 130 63.1
SHI28555 Sapria himalayana HOM05D005873 ORTHO05D007582 1.1e-38 165.6 102 79.4
Psat0s133g0080 Pisum sativum HOM05D005873 ORTHO05D007582 2.7e-37 161.0 173 54.9
SHI28562 Sapria himalayana HOM05D005873 ORTHO05D007582 4.3e-35 153.7 112 63.4
Potri.011G065402 Populus trichocarpa HOM05D005873 ORTHO05D007582 5.2e-33 146.7 100 74.0
SHI28558 Sapria himalayana HOM05D005873 ORTHO05D050808 1.0e-28 132.5 96 63.5
Lsat_1_v5_gn_1_96960 Lactuca sativa HOM05D001670 ORTHO05D002980 2.9e-23 114.4 118 54.2
Lsat_1_v5_gn_9_10320 Lactuca sativa HOM05D001670 ORTHO05D002980 1.2e-18 99.0 62 71.0
Lsat_1_v5_gn_4_5981 Lactuca sativa HOM05D005873 ORTHO05D002980 4.4e-16 90.5 59 72.9
Oeu041773.1 Olea europaea HOM05D005873 ORTHO05D042378 7.1e-14 83.2 62 62.9
Cpa.g.c47463 Carica papaya HOM05D005873 ORTHO05D007582 4.6e-13 80.5 45 80.0
A06p46270 Brassica napus HOM05D005873 ORTHO05D042378 1.6e-10 72.0 46 67.4
SHI28556 Sapria himalayana HOM05D005873 ORTHO05D007582 2.8e-10 71.2 51 54.9
unitig_0.g713 Utricularia gibba HOM05D005873 ORTHO05D007582 1.9e-06 58.5 51 51.0


User provided reference genes

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