Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40318 Davidia involucrata HOM05D000246 ORTHO05D007179 1.1e-50 203.0 101 100.0
vmacro04965 Vaccinium macrocarpon HOM05D000246 ORTHO05D007179 1.8e-32 142.5 102 74.5
Nitab4.5_0002344g0100 Nicotiana tabacum HOM05D000246 ORTHO05D007179 6.3e-30 134.0 102 68.6
Peaxi162Scf00037g00932 Petunia axillaris HOM05D000246 ORTHO05D007179 3.1e-29 131.7 102 68.6
Nitab4.5_0008329g0030 Nicotiana tabacum HOM05D000246 ORTHO05D007179 4.1e-29 131.3 102 65.7
ECA240G0991 Erigeron canadensis HOM05D000246 ORTHO05D007179 2.6e-28 128.6 98 68.4
ClCG02G015470 Citrullus lanatus HOM05D000246 ORTHO05D007179 1.7e-27 125.9 109 64.2
Lj5A431G15 Lonicera japonica HOM05D000246 ORTHO05D007179 1.7e-27 125.9 103 69.9
CsaV3_2G006600 Cucumis sativus L. HOM05D000246 ORTHO05D007179 2.9e-27 125.2 110 64.5
TAR633G0108 Trochodendron aralioides HOM05D000246 ORTHO05D007179 2.9e-27 125.2 101 65.3
Sopen01g043000 Solanum pennellii HOM05D000246 ORTHO05D007179 3.8e-27 124.8 100 64.0
Rhsim07G0187000 Rhododendron simsii HOM05D000246 ORTHO05D007179 5.0e-27 124.4 90 73.3
Atru.chr2.19 Acer truncatum HOM05D000246 ORTHO05D007179 6.5e-27 124.0 107 64.5
CAN.G1652.4 Capsicum annuum HOM05D000246 ORTHO05D007179 1.1e-26 123.2 100 64.0
MBI19_g18874_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007179 1.4e-26 122.9 101 66.3
Nn3g21421 Nelumbo nucifera HOM05D000246 ORTHO05D007179 1.4e-26 122.9 101 67.3
Prupe.6G321800 Prunus persica HOM05D000246 ORTHO05D007179 1.4e-26 122.9 108 60.2
Solyc01g099470.3 Solanum lycopersicum HOM05D000246 ORTHO05D007179 1.4e-26 122.9 99 63.6
arahy.Tifrunner.gnm1.ann1.JYY4I0 Arachis hypogaea HOM05D000246 ORTHO05D007179 2.5e-26 122.1 110 63.6
arahy.Tifrunner.gnm1.ann1.K95L4M Arachis hypogaea HOM05D000246 ORTHO05D007179 2.5e-26 122.1 110 63.6
CSS0043712 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 2.5e-26 122.1 101 64.4
CSS0044658 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 2.5e-26 122.1 101 64.4
Haze_04155 Corylus avellana HOM05D000246 ORTHO05D007179 3.2e-26 121.7 118 60.2
Gorai.007G299200 Gossypium raimondii HOM05D000246 ORTHO05D007179 3.2e-26 121.7 104 62.5
Manes.08G118800 Manihot esculenta HOM05D000246 ORTHO05D007179 3.2e-26 121.7 101 64.4
Gohir.A11G267000 Gossypium hirsutum HOM05D000246 ORTHO05D007179 4.2e-26 121.3 104 62.5
Ca_10124_v3 Cicer arietinum L. HOM05D000246 ORTHO05D007179 5.5e-26 120.9 107 65.4
Sed0014533 Sechium edule HOM05D000246 ORTHO05D007179 5.5e-26 120.9 109 62.4
Cc00_g10440 Coffea canephora HOM05D000246 ORTHO05D007179 1.6e-25 119.4 101 63.4
Duzib177G0836 Durio zibethinus HOM05D000246 ORTHO05D007179 1.6e-25 119.4 104 62.5
Gohir.D11G277100 Gossypium hirsutum HOM05D000246 ORTHO05D007179 1.6e-25 119.4 104 61.5
MELO3C004226.2 Cucumis melo HOM05D000246 ORTHO05D007179 3.6e-25 118.2 106 63.2
Glyma.20G236000 Glycine max HOM05D000246 ORTHO05D007179 4.6e-25 117.9 110 62.7
Psat6g150320 Pisum sativum HOM05D000246 ORTHO05D007179 4.6e-25 117.9 110 62.7
arahy.Tifrunner.gnm1.ann1.G0LK44 Arachis hypogaea HOM05D000246 ORTHO05D007179 6.1e-25 117.5 115 61.7
MD04G1201600 Malus domestica HOM05D000246 ORTHO05D007179 7.9e-25 117.1 108 57.4
Sabra05G0031700 Salix brachista HOM05D000359 ORTHO05D007179 1.0e-24 116.7 105 64.8
TPR.G6096 Trifolium pratense HOM05D000246 ORTHO05D007179 1.4e-24 116.3 110 60.0
Migut.B01029 Erythranthe guttata HOM05D000246 ORTHO05D007179 1.8e-24 115.9 101 60.4
Lsat_1_v5_gn_9_123801 Lactuca sativa HOM05D000246 ORTHO05D007179 1.8e-24 115.9 99 66.7
PSO170G0679 Papaver somniferum HOM05D000246 ORTHO05D007179 1.8e-24 115.9 101 61.4
Ciclev10000234m.g Citrus clementina HOM05D000246 ORTHO05D007179 3.0e-24 115.2 107 61.7
Aqoxy2G03005 Aquilegia oxysepala HOM05D000246 ORTHO05D007179 5.1e-24 114.4 99 63.6
CiPaw.08G162700 Carya illinoinensis HOM05D000246 ORTHO05D007179 5.1e-24 114.4 119 57.1
Lj5A421T62 Lonicera japonica HOM05D000246 ORTHO05D007179 5.1e-24 114.4 92 70.7
PGR031G3950 Punica granatum HOM05D000246 ORTHO05D007179 5.1e-24 114.4 101 62.4
Thecc.05G311900 Theobroma cacao HOM05D000246 ORTHO05D007179 5.1e-24 114.4 106 62.3
CANSAT54G2417 Cannabis sativa HOM05D000246 ORTHO05D007179 8.8e-24 113.6 109 58.7
Lalb_Chr21g0310621 Lupinus albus HOM05D000246 ORTHO05D007179 8.8e-24 113.6 110 60.9
TWI56G0873 Tripterygium wilfordii HOM05D000246 ORTHO05D007179 8.8e-24 113.6 105 59.0
Hund21703 Selenicereus undatus HOM05D000246 ORTHO05D007179 3.3e-23 111.7 102 62.7
Eucgr.L01168 Eucalyptus grandis HOM05D000246 ORTHO05D007179 5.7e-23 110.9 99 62.6
Phvul.007G196600 Phaseolus vulgaris HOM05D000246 ORTHO05D007179 5.7e-23 110.9 111 59.5
PSO210G2254 Papaver somniferum HOM05D000246 ORTHO05D007179 9.7e-23 110.2 101 60.4
CDE01G0473 Ceratophyllum demersum HOM05D000246 ORTHO05D007179 1.7e-22 109.4 100 57.0
QL03p021621 Quercus lobata HOM05D000246 ORTHO05D007179 1.7e-22 109.4 117 55.6
QL03p021635 Quercus lobata HOM05D000246 ORTHO05D007179 1.7e-22 109.4 117 55.6
FAN02G0914 Fragaria x ananassa HOM05D000246 ORTHO05D007179 2.8e-22 108.6 114 55.3
FAN05G3600 Fragaria x ananassa HOM05D000246 ORTHO05D007179 2.8e-22 108.6 114 55.3
Cfa006619 Carpinus fangiana HOM05D000246 ORTHO05D007179 3.7e-22 108.2 92 65.2
HanXRQChr03g0072511 Helianthus annuus HOM05D000246 ORTHO05D007179 1.8e-21 105.9 99 58.6
RcHm_v2.0_Chr3g0455521 Rosa chinensis HOM05D000246 ORTHO05D007179 1.8e-21 105.9 110 55.5
COL.COLO4_10505 Corchorus olitorius HOM05D000246 ORTHO05D007179 2.4e-21 105.5 105 58.1
Aqoxy2G02800 Aquilegia oxysepala HOM05D000246 ORTHO05D007179 5.3e-21 104.4 77 70.1
Lj5g0018456 Lotus japonicus HOM05D000246 ORTHO05D007179 2.0e-20 102.4 75 69.3
AUR62000778 Chenopodium quinoa HOM05D000246 ORTHO05D007179 2.6e-20 102.1 104 56.7
Potri.005G026400 Populus trichocarpa HOM05D000246 ORTHO05D007179 2.6e-20 102.1 106 59.4
FAN14G0626 Fragaria x ananassa HOM05D000246 ORTHO05D007179 3.4e-20 101.7 74 68.9
AUR62005191 Chenopodium quinoa HOM05D000246 ORTHO05D007179 4.5e-20 101.3 104 57.7
Oeu012115.1 Olea europaea HOM05D000246 ORTHO05D007179 1.0e-19 100.1 66 74.2
EL10Ac4g09931 Beta vulgaris HOM05D000246 ORTHO05D007179 1.7e-19 99.4 104 58.7
FvH4_6g06440 Fragaria vesca HOM05D000246 ORTHO05D007179 1.7e-19 99.4 114 51.8
Actinidia05681 Actinidia chinensis HOM05D000246 ORTHO05D007179 2.9e-19 98.6 59 74.6
Medtr1g083250 Medicago truncatula HOM05D000246 ORTHO05D007179 2.9e-19 98.6 108 53.7
GSVIVG01031124001 Vitis vinifera HOM05D001472 ORTHO05D002655 5.0e-19 97.8 88 60.2
Cpa.g.sc48.83 Carica papaya HOM05D000246 ORTHO05D007179 5.5e-18 94.4 80 68.8
HPP92_010691 Vanilla planifolia HOM05D000246 ORTHO05D007179 5.5e-18 94.4 99 54.5
ATR0210G017 Amborella trichopoda HOM05D000246 ORTHO05D007179 7.2e-18 94.0 99 50.5
SHI18110 Sapria himalayana HOM05D000246 ORTHO05D007179 1.6e-17 92.8 104 51.9
FvH4_6g06441 Fragaria vesca HOM05D000246 ORTHO05D007179 1.8e-16 89.4 101 51.5
VMungo0720G1388 Vigna mungo HOM05D000246 ORTHO05D007179 2.0e-15 85.9 108 52.8
FAN05G4756 Fragaria x ananassa HOM05D000246 ORTHO05D007179 7.4e-15 84.0 100 53.0
AT5G27680 Arabidopsis thaliana HOM05D000246 ORTHO05D007179 9.7e-15 83.6 63 65.1
Zm00001eb354210 Zea mays HOM05D000246 ORTHO05D007179 9.7e-15 83.6 102 47.1
Aa31LG11G9420 Aethionema arabicum HOM05D000246 ORTHO05D007179 1.7e-14 82.8 81 55.6
AL6G39350 Arabidopsis lyrata HOM05D000246 ORTHO05D007179 2.8e-14 82.0 63 63.5
A06p37370 Brassica napus HOM05D000246 ORTHO05D007179 3.7e-14 81.6 80 57.5
Thhalv10003644m.g Eutrema salsugineum HOM05D000246 ORTHO05D007179 3.7e-14 81.6 87 50.6
BraA06t26661Z Brassica rapa HOM05D000246 ORTHO05D007179 6.3e-14 80.9 80 56.2
SEGI_40367 Sequoiadendron giganteum HOM05D000246 ORTHO05D007179 6.3e-14 80.9 105 48.6
C07p41090 Brassica napus HOM05D000246 ORTHO05D007179 8.2e-14 80.5 80 56.2
BolC7t44636H Brassica oleracea HOM05D000246 ORTHO05D007179 8.2e-14 80.5 80 56.2
CARHR186200 Cardamine hirsuta HOM05D000246 ORTHO05D007179 4.1e-13 78.2 63 60.3
Carub.0006s2490 Capsella rubella HOM05D000246 ORTHO05D007179 5.3e-13 77.8 63 58.7
DCAR_003348 Daucus carota HOM05D000246 ORTHO05D007179 1.2e-12 76.6 130 42.3
Sp2g20840 Schrenkiella parvula HOM05D000246 ORTHO05D007179 5.9e-12 74.3 73 57.5
Solyc02g088430.1 Solanum lycopersicum HOM05D000246 ORTHO05D007179 7.5e-07 57.4 55 50.9
BcaNung04538 Brassica carinata HOM05D005214 ORTHO05D005861 9.7e-07 57.0 52 57.7
MBI19_g41249_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007179 1.7e-06 56.2 48 58.3
C07p40980 Brassica napus HOM05D008896 ORTHO05D011108 2.2e-06 55.8 49 61.2


User provided reference genes

Program Settings