Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40019 Davidia involucrata HOM05D004674 ORTHO05D007261 9.0e-287 989.6 502 100.0
CSS0017426 Camellia sinensis var. sinensis HOM05D004674 ORTHO05D007261 2.4e-239 832.0 502 84.9
TAR376G0875 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.2e-238 829.7 504 84.1
Actinidia35628 Actinidia chinensis HOM05D004674 ORTHO05D007261 1.3e-237 826.2 502 82.9
Gorai.007G201200 Gossypium raimondii HOM05D004674 ORTHO05D007261 1.1e-236 823.2 504 83.5
QL06p035418 Quercus lobata HOM05D004674 ORTHO05D007261 6.1e-235 817.4 503 83.5
Gohir.A11G182300 Gossypium hirsutum HOM05D004674 ORTHO05D007261 1.0e-234 816.6 504 83.3
Duzib264G1222 Durio zibethinus HOM05D004674 ORTHO05D007261 1.4e-234 816.2 504 81.9
GSVIVG01018892001 Vitis vinifera HOM05D004674 ORTHO05D007261 2.3e-234 815.5 504 82.1
Cpa.g.sc6.166 Carica papaya HOM05D004674 ORTHO05D007261 1.5e-233 812.8 504 82.1
QL06p035429 Quercus lobata HOM05D004674 ORTHO05D007261 2.0e-233 812.4 504 83.3
MD15G1256300 Malus domestica HOM05D004674 ORTHO05D007261 1.7e-232 809.3 502 81.7
Haze_03856 Corylus avellana HOM05D004674 ORTHO05D007261 3.7e-232 808.1 500 82.4
Gohir.D11G189100 Gossypium hirsutum HOM05D004674 ORTHO05D007261 6.3e-232 807.4 512 81.4
Nn5g29687 Nelumbo nucifera HOM05D004674 ORTHO05D007261 8.3e-232 807.0 504 81.2
COL.COLO4_22030 Corchorus olitorius HOM05D004674 ORTHO05D007261 9.1e-231 803.5 504 81.7
Cfa006896 Carpinus fangiana HOM05D004674 ORTHO05D007261 1.6e-230 802.7 504 81.7
Atru.chr3.699 Acer truncatum HOM05D004674 ORTHO05D007261 2.7e-230 802.0 504 82.3
CANSAT01G1299 Cannabis sativa HOM05D004674 ORTHO05D007261 2.7e-230 802.0 506 80.2
Oeu019445.1 Olea europaea HOM05D004674 ORTHO05D007261 3.5e-230 801.6 502 81.5
CiPaw.07G049300 Carya illinoinensis HOM05D004674 ORTHO05D007261 4.5e-230 801.2 500 82.4
Prupe.7G158600 Prunus persica HOM05D004674 ORTHO05D007261 1.0e-229 800.0 500 81.4
Medtr8g076950 Medicago truncatula HOM05D004674 ORTHO05D007261 1.7e-229 799.3 500 81.4
Lj4A206G17 Lonicera japonica HOM05D004674 ORTHO05D007261 2.9e-229 798.5 488 83.4
Potri.007G021000 Populus trichocarpa HOM05D004674 ORTHO05D007261 8.6e-229 797.0 504 81.3
Ciclev10024970m.g Citrus clementina HOM05D004674 ORTHO05D007261 3.2e-228 795.0 503 81.9
Rhsim08G0121400 Rhododendron simsii HOM05D004674 ORTHO05D007261 3.2e-228 795.0 545 75.2
DCAR_017308 Daucus carota HOM05D004674 ORTHO05D007261 7.2e-228 793.9 503 80.5
Sabra07G0018000 Salix brachista HOM05D004674 ORTHO05D007261 9.5e-228 793.5 504 81.0
FAN26G2871 Fragaria x ananassa HOM05D004674 ORTHO05D007261 2.8e-227 792.0 499 81.0
Lj4g0022194 Lotus japonicus HOM05D004674 ORTHO05D007261 8.0e-227 790.4 500 80.8
TPR.G21548 Trifolium pratense HOM05D004674 ORTHO05D007261 8.0e-227 790.4 502 80.1
Aqoxy5G01578 Aquilegia oxysepala HOM05D004674 ORTHO05D007261 1.0e-226 790.0 504 79.6
Glyma.02G053800 Glycine max HOM05D004674 ORTHO05D007261 1.0e-226 790.0 500 80.4
Eucgr.I02404 Eucalyptus grandis HOM05D004674 ORTHO05D007261 1.4e-226 789.6 503 79.9
VMungo0251G2099 Vigna mungo HOM05D004674 ORTHO05D007261 2.3e-226 788.9 500 80.4
Ca_22335_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 4.0e-226 788.1 500 80.6
SalBow8G5199 Salvia bowleyana HOM05D004674 ORTHO05D007261 5.2e-226 787.7 502 79.1
Cc07_g09910 Coffea canephora HOM05D004674 ORTHO05D007261 6.8e-226 787.3 500 79.4
ECA232G2544 Erigeron canadensis HOM05D004674 ORTHO05D000001 1.5e-225 786.2 500 80.2
SalBow8G1271 Salvia bowleyana HOM05D004674 ORTHO05D007261 2.0e-225 785.8 502 78.9
RcHm_v2.0_Chr2g0100861 Rosa chinensis HOM05D004674 ORTHO05D007261 7.5e-225 783.9 499 79.8
arahy.Tifrunner.gnm1.ann1.LKR1Y0 Arachis hypogaea HOM05D004674 ORTHO05D007261 6.3e-224 780.8 505 79.2
Phvul.003G256400 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 8.3e-224 780.4 498 79.9
HanXRQChr09g0261191 Helianthus annuus HOM05D004674 ORTHO05D007261 4.1e-223 778.1 500 79.8
Sopen02g013570 Solanum pennellii HOM05D004674 ORTHO05D007261 2.0e-222 775.8 503 79.9
Migut.H02523 Erythranthe guttata HOM05D004674 ORTHO05D007261 5.9e-222 774.2 501 78.0
PGSC0003DMG400015491 Solanum tuberosum HOM05D004674 ORTHO05D007261 5.9e-222 774.2 503 79.7
FAN23G0750 Fragaria x ananassa HOM05D004674 ORTHO05D007261 7.8e-222 773.9 508 78.7
TWI09G0339 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 7.8e-222 773.9 504 79.2
ClCG01G019830 Citrullus lanatus HOM05D004674 ORTHO05D007261 1.0e-221 773.5 548 73.2
THA.LOC104821303 Tarenaya hassleriana HOM05D004674 ORTHO05D007261 1.0e-221 773.5 501 79.6
Thhalv10003695m.g Eutrema salsugineum HOM05D004674 ORTHO05D007261 1.7e-221 772.7 506 79.4
Lsat_1_v5_gn_4_148020 Lactuca sativa HOM05D004674 ORTHO05D007261 1.7e-221 772.7 501 78.6
Lalb_Chr16g0391041 Lupinus albus HOM05D004674 ORTHO05D007261 2.9e-221 771.9 505 79.0
CsaV3_6G046560 Cucumis sativus L. HOM05D004674 ORTHO05D007261 5.0e-221 771.2 501 78.0
arahy.Tifrunner.gnm1.ann1.SG067W Arachis hypogaea HOM05D004674 ORTHO05D007261 5.6e-220 767.7 534 75.1
CAN.G1019.6 Capsicum annuum HOM05D004674 ORTHO05D007261 5.6e-220 767.7 503 78.9
Nitab4.5_0001525g0030 Nicotiana tabacum HOM05D004674 ORTHO05D007261 7.3e-220 767.3 503 78.9
Peaxi162Scf00008g03325 Petunia axillaris HOM05D004674 ORTHO05D007261 9.5e-220 766.9 503 78.5
Hund16446 Selenicereus undatus HOM05D004674 ORTHO05D007261 1.6e-219 766.1 506 77.9
Solyc02g062560.3 Solanum lycopersicum HOM05D004674 ORTHO05D007261 1.6e-219 766.1 503 79.1
EL10As8g23909 Beta vulgaris HOM05D004674 ORTHO05D007261 4.7e-219 764.6 504 77.6
A07p17540 Brassica napus HOM05D004674 ORTHO05D007261 4.7e-219 764.6 503 78.1
BraA07t29474Z Brassica rapa HOM05D004674 ORTHO05D007261 6.1e-219 764.2 503 77.9
MSTRG.2485 Avicennia marina HOM05D004674 ORTHO05D007261 1.8e-218 762.7 501 77.6
AL8G45110 Arabidopsis lyrata HOM05D004674 ORTHO05D007261 2.3e-218 762.3 505 77.4
Carub.0008s2809 Capsella rubella HOM05D004674 ORTHO05D007261 3.0e-218 761.9 505 77.8
Sc16g0002550 Simmondsia chinensis HOM05D004674 ORTHO05D007261 8.9e-218 760.4 500 78.4
Sed0001139 Sechium edule HOM05D004674 ORTHO05D007261 1.2e-217 760.0 509 77.0
Sp2g30300 Schrenkiella parvula HOM05D004674 ORTHO05D007261 4.4e-217 758.1 506 77.3
AT5G66420 Arabidopsis thaliana HOM05D004674 ORTHO05D007261 7.5e-217 757.3 505 77.4
Nitab4.5_0000136g0250 Nicotiana tabacum HOM05D004674 ORTHO05D007261 7.5e-217 757.3 528 75.0
PGR119G1113 Punica granatum HOM05D004674 ORTHO05D007261 7.5e-217 757.3 502 76.1
BcaB02g10033 Brassica carinata HOM05D004674 ORTHO05D007261 4.9e-216 754.6 510 76.7
CARHR034750 Cardamine hirsuta HOM05D004674 ORTHO05D007261 6.4e-216 754.2 503 76.9
C07p25500 Brassica napus HOM05D004674 ORTHO05D007261 1.6e-214 749.6 510 76.3
BolC7t43070H Brassica oleracea HOM05D004674 ORTHO05D007261 1.0e-213 746.9 510 76.1
AUR62004091 Chenopodium quinoa HOM05D004674 ORTHO05D007261 1.3e-213 746.5 525 73.5
FvH4_1g12760 Fragaria vesca HOM05D004674 ORTHO05D007261 3.0e-213 745.3 498 76.7
HPP92_004908 Vanilla planifolia HOM05D004674 ORTHO05D007261 3.0e-213 745.3 508 74.6
BcaC06g34697 Brassica carinata HOM05D004674 ORTHO05D007261 1.5e-212 743.0 510 75.7
SGA_v2.0_scaffold12G06320 Striga asiatica HOM05D004674 ORTHO05D007261 4.3e-212 741.5 492 76.6
PSO170G5809 Papaver somniferum HOM05D004674 ORTHO05D007261 1.2e-211 740.0 501 74.5
FAN28G0143 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.6e-211 739.6 499 76.8
FAN19G2260 Fragaria x ananassa HOM05D004674 ORTHO05D007261 8.0e-211 737.3 499 76.8
ATR0568G133 Amborella trichopoda HOM05D004674 ORTHO05D007261 6.8e-210 734.2 511 74.8
Os06g0472400 Oryza sativa ssp. japonica HOM05D004674 ORTHO05D007261 2.0e-209 732.6 504 74.2
unitig_60.g25534 Utricularia gibba HOM05D004674 ORTHO05D007261 2.0e-209 732.6 500 74.6
Zm00001eb225760 Zea mays HOM05D004674 ORTHO05D007261 5.8e-209 731.1 503 73.6
SEGI_40838 Sequoiadendron giganteum HOM05D004674 ORTHO05D007261 8.9e-194 680.6 591 61.4
AUR62007603 Chenopodium quinoa HOM05D004674 ORTHO05D007261 7.6e-193 677.6 454 76.4
Aa31LG1G14940 Aethionema arabicum HOM05D004674 ORTHO05D007261 2.2e-192 676.0 500 71.4
Manes.02G097100 Manihot esculenta HOM05D004674 ORTHO05D007261 4.6e-190 668.3 424 80.7
Pp3c20_8030 Physcomitrium patens HOM05D004674 ORTHO05D007261 6.2e-187 657.9 498 65.1
SMO367G0601 Selaginella moellendorffii HOM05D004674 ORTHO05D007261 1.2e-182 643.7 498 65.5
AagrBONN_evm.TU.Sc2ySwM_344.2833 Anthoceros agrestis HOM05D004674 ORTHO05D007261 1.8e-165 586.6 519 58.4
TAR376G0765 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.1e-164 583.9 504 63.3
Psat4g095640 Pisum sativum HOM05D004674 ORTHO05D007261 5.7e-140 501.9 357 72.8
TAR376G0038 Trochodendron aralioides HOM05D004674 ORTHO05D007261 5.2e-133 478.8 311 80.7
Thecc.01G030000 Theobroma cacao HOM05D004674 ORTHO05D007261 8.8e-133 478.0 309 79.3
TAR376G0961 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.2e-121 441.0 308 76.0
Glyma.16G133867 Glycine max HOM05D004674 ORTHO05D007261 4.1e-106 389.4 220 87.7
MD02G1142700 Malus domestica HOM05D004674 ORTHO05D007261 6.0e-97 359.0 261 73.6
MELO3C007854.2 Cucumis melo HOM05D004674 ORTHO05D007261 1.5e-95 354.4 195 90.8
Psat0s3062g0040 Pisum sativum HOM05D004674 ORTHO05D007261 1.1e-93 348.2 245 73.5
Atru.chr3.652 Acer truncatum HOM05D004674 ORTHO05D007261 6.6e-80 302.4 219 73.1
Duzib147G1548 Durio zibethinus HOM05D004674 ORTHO05D007261 7.3e-79 298.9 230 69.6
COL.COLO4_22029 Corchorus olitorius HOM05D004674 ORTHO05D007261 1.4e-74 284.6 205 71.2
TWI09G0580 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 2.7e-73 280.4 176 76.1
Potri.005G120100 Populus trichocarpa HOM05D004674 ORTHO05D007261 9.0e-69 265.4 177 75.7
Gohir.D11G189150 Gossypium hirsutum HOM05D004674 ORTHO05D007261 3.8e-67 260.0 190 70.5
Gorai.007G201400 Gossypium raimondii HOM05D004674 ORTHO05D007261 3.8e-67 260.0 190 70.5
Zm00001eb098830 Zea mays HOM05D004674 ORTHO05D007261 1.9e-66 257.7 168 75.0
Zm00001eb124970 Zea mays HOM05D004674 ORTHO05D007261 1.9e-66 257.7 160 81.2
MELO3C010392.2 Cucumis melo HOM05D004674 ORTHO05D007261 3.5e-65 253.4 310 49.7
vmacro19462 Vaccinium macrocarpon HOM05D004674 ORTHO05D007261 9.6e-63 245.4 139 89.2
Actinidia19204 Actinidia chinensis HOM05D004674 ORTHO05D007261 1.3e-59 235.0 153 75.8
PSO407G0425 Papaver somniferum HOM05D004674 ORTHO05D007261 6.4e-59 232.6 176 64.2
Phvul.003G256200 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 3.2e-58 230.3 141 81.6
PSO170G6195 Papaver somniferum HOM05D004674 ORTHO05D007261 3.5e-57 226.9 176 64.2
Lj4C205T11 Lonicera japonica HOM05D004674 ORTHO05D007261 1.6e-54 218.0 310 47.1
TAR376G0549 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.1e-53 215.3 131 81.7
Glyma.16G133933 Glycine max HOM05D004674 ORTHO05D007261 2.4e-53 214.2 156 71.2
Gohir.A11G182500 Gossypium hirsutum HOM05D004674 ORTHO05D007261 4.0e-53 213.4 173 64.7
Ca_06503_v3 Cicer arietinum L. HOM05D000059 ORTHO05D000128 3.5e-49 200.3 215 55.3
QL03p066021 Quercus lobata HOM05D004674 ORTHO05D029177 5.1e-48 196.4 123 78.9
Psat4g095680 Pisum sativum HOM05D004674 ORTHO05D007261 2.6e-44 184.1 103 89.3
Atru.chr3.653 Acer truncatum HOM05D004674 ORTHO05D007261 3.8e-43 180.3 97 88.7
Ca_07052_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 6.5e-43 179.5 160 60.6
Ca_22377_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 1.8e-40 171.4 143 63.6
MELO3C028475.2 Cucumis melo HOM05D004674 ORTHO05D029177 2.6e-28 131.0 81 77.8
Zm00001eb135660 Zea mays HOM05D004674 ORTHO05D007261 3.8e-27 127.1 86 75.6
arahy.Tifrunner.gnm1.ann1.TV0A1X Arachis hypogaea HOM05D004674 ORTHO05D007261 7.9e-25 119.4 100 61.0
Dinv40102 Davidia involucrata HOM05D004674 ORTHO05D020551 7.0e-21 106.3 109 55.0
Zm00001eb334700 Zea mays HOM05D004674 ORTHO05D007261 3.5e-20 104.0 71 71.8
SEGI_19277 Sequoiadendron giganteum HOM05D004674 ORTHO05D020551 4.2e-18 97.1 229 34.1
HanXRQChr08g0221331 Helianthus annuus HOM05D004674 ORTHO05D021509 1.2e-17 95.5 183 41.0
Gohir.A06G159466 Gossypium hirsutum HOM05D004674 ORTHO05D029177 3.3e-15 87.4 52 84.6
SGA_v2.0_scaffold48G18033 Striga asiatica HOM05D004674 ORTHO05D051422 9.7e-15 85.9 125 39.2
Gorai.010G192800 Gossypium raimondii HOM05D004674 ORTHO05D029177 6.3e-14 83.2 52 80.8
MD02G1142800 Malus domestica HOM05D004674 ORTHO05D020551 5.9e-12 76.6 73 60.3
Duzib248G0237 Durio zibethinus HOM05D004674 ORTHO05D020551 5.5e-10 70.1 43 76.7
MELO3C028160.2 Cucumis melo HOM05D004674 ORTHO05D029175 1.0e-08 65.9 36 91.7
GSVIVG01017515001 Vitis vinifera HOM05D004674 ORTHO05D020551 6.8e-08 63.2 40 72.5
Sabra05G0098800 Salix brachista HOM05D004674 ORTHO05D349121 8.8e-08 62.8 54 64.8
GSVIVG01005333001 Vitis vinifera HOM05D004674 ORTHO05D020551 7.5e-07 59.7 40 67.5
MELO3C001880.2 Cucumis melo HOM05D004674 ORTHO05D029175 4.8e-06 57.0 29 96.6
MELO3C028263.2 Cucumis melo HOM05D004674 ORTHO05D029175 4.8e-06 57.0 29 96.6


User provided reference genes

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