Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39906 Davidia involucrata HOM05D005480 ORTHO05D006735 1.6e-237 825.9 477 100.0
Dinv26753 Davidia involucrata HOM05D005480 ORTHO05D006735 7.0e-164 581.3 406 84.2
CSS0014684 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 7.3e-161 571.2 511 70.1
QL06p043724 Quercus lobata HOM05D005480 ORTHO05D006735 4.0e-159 565.5 514 70.8
CiPaw.01G026500 Carya illinoinensis HOM05D005480 ORTHO05D006735 9.8e-158 560.8 506 70.9
Lj7A20T61 Lonicera japonica HOM05D005480 ORTHO05D006735 3.5e-155 552.4 413 75.8
CSS0005424 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 1.3e-154 550.4 508 68.9
Hma1.2p1_0546F.1_g176180 Hydrangea macrophylla HOM05D005480 ORTHO05D006735 2.5e-153 546.2 485 70.7
Lj7A18T44 Lonicera japonica HOM05D005480 ORTHO05D006735 1.6e-152 543.5 421 74.1
Gohir.A12G068600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 4.7e-152 542.0 498 70.1
Actinidia12077 Actinidia chinensis HOM05D005480 ORTHO05D006735 6.2e-152 541.6 502 69.5
Thecc.01G048100 Theobroma cacao HOM05D005480 ORTHO05D006735 1.4e-151 540.4 492 69.9
Eucgr.H01972 Eucalyptus grandis HOM05D005480 ORTHO05D006735 5.2e-151 538.5 438 71.9
Gohir.D12G090600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 2.0e-150 536.6 496 69.2
Sopen02g034920 Solanum pennellii HOM05D005480 ORTHO05D006735 3.4e-150 535.8 423 71.9
Solyc02g090230.4 Solanum lycopersicum HOM05D005480 ORTHO05D006735 1.7e-149 533.5 423 71.6
TAR625G1062 Trochodendron aralioides HOM05D005480 ORTHO05D006735 3.7e-149 532.3 477 67.5
PGSC0003DMG400010074 Solanum tuberosum HOM05D005480 ORTHO05D006735 4.9e-149 531.9 423 71.6
Manes.13G130100 Manihot esculenta HOM05D005480 ORTHO05D006735 2.4e-148 529.6 507 67.7
Gorai.008G072400 Gossypium raimondii HOM05D005480 ORTHO05D006735 3.5e-147 525.8 492 69.1
MELO3C007529.2 Cucumis melo HOM05D005480 ORTHO05D006735 4.6e-147 525.4 432 69.7
Potri.007G036600 Populus trichocarpa HOM05D005480 ORTHO05D006735 1.0e-146 524.2 523 66.9
MD02G1161300 Malus domestica HOM05D005480 ORTHO05D006735 1.7e-146 523.5 429 69.7
Glyma.01G181500 Glycine max HOM05D005480 ORTHO05D006735 8.6e-146 521.2 428 72.4
Duzib187G0998 Durio zibethinus HOM05D005480 ORTHO05D006735 1.1e-145 520.8 492 68.9
Prupe.7G142300 Prunus persica HOM05D005480 ORTHO05D006735 1.1e-145 520.8 504 68.3
Cc07_g05560 Coffea canephora HOM05D005480 ORTHO05D006735 4.3e-145 518.8 510 67.1
TPR.G11349 Trifolium pratense HOM05D005480 ORTHO05D006735 4.3e-145 518.8 501 66.7
PGR102G0042 Punica granatum HOM05D005480 ORTHO05D006735 1.2e-144 517.3 498 67.3
MSTRG.23794 Avicennia marina HOM05D005480 ORTHO05D006735 1.1e-143 514.2 487 67.6
TAR381G0420 Trochodendron aralioides HOM05D005480 ORTHO05D006735 1.1e-143 514.2 450 70.4
Phvul.002G022500 Phaseolus vulgaris HOM05D005480 ORTHO05D006735 3.1e-143 512.7 469 71.2
CsaV3_6G042900 Cucumis sativus L. HOM05D005480 ORTHO05D006735 5.2e-143 511.9 505 65.3
Duzib147G0741 Durio zibethinus HOM05D005480 ORTHO05D006735 8.9e-143 511.1 499 68.1
DCAR_021432 Daucus carota HOM05D005480 ORTHO05D006735 1.7e-141 506.9 414 69.6
Medtr5g018390 Medicago truncatula HOM05D005480 ORTHO05D006735 2.9e-141 506.1 436 66.5
MD15G1275400 Malus domestica HOM05D005480 ORTHO05D006735 1.1e-140 504.2 513 63.7
Rhsim02G0168000 Rhododendron simsii HOM05D005480 ORTHO05D006735 2.4e-140 503.1 400 71.8
Lj2g0021055 Lotus japonicus HOM05D005480 ORTHO05D006735 3.2e-140 502.7 432 69.0
VMungo1215G2543 Vigna mungo HOM05D005480 ORTHO05D006735 7.1e-140 501.5 480 69.0
Cfa004218 Carpinus fangiana HOM05D005480 ORTHO05D006735 2.1e-139 500.0 404 72.3
Glyma.11G059700 Glycine max HOM05D005480 ORTHO05D006735 1.0e-138 497.7 338 77.5
Migut.H00485 Erythranthe guttata HOM05D005480 ORTHO05D006735 2.5e-137 493.0 530 61.3
CANSAT01G1679 Cannabis sativa HOM05D005480 ORTHO05D006735 1.2e-136 490.7 441 67.6
ClCG01G016580 Citrullus lanatus HOM05D005480 ORTHO05D006735 1.6e-136 490.3 480 61.5
RcHm_v2.0_Chr2g0103771 Rosa chinensis HOM05D005480 ORTHO05D006735 6.2e-136 488.4 427 67.7
Sc03g0001260 Simmondsia chinensis HOM05D005480 ORTHO05D006735 3.1e-135 486.1 428 64.7
Sed0026694 Sechium edule HOM05D005480 ORTHO05D006735 5.2e-135 485.3 493 64.7
Peaxi162Scf00993g00022 Petunia axillaris HOM05D005480 ORTHO05D006735 1.3e-133 480.7 391 71.4
Lalb_Chr09g0322931 Lupinus albus HOM05D005480 ORTHO05D006735 8.4e-133 478.0 435 67.4
Ciclev10025487m.g Citrus clementina HOM05D005480 ORTHO05D006735 7.1e-132 474.9 426 67.8
FAN23G2977 Fragaria x ananassa HOM05D005480 ORTHO05D006735 7.1e-132 474.9 474 64.6
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 2.7e-131 473.0 422 64.0
HanXRQChr04g0123741 Helianthus annuus HOM05D005480 ORTHO05D006735 5.1e-130 468.8 496 63.3
Hund13586 Selenicereus undatus HOM05D005480 ORTHO05D006735 5.1e-130 468.8 431 64.5
Oeu003952.2 Olea europaea HOM05D005480 ORTHO05D006735 1.1e-129 467.6 641 50.4
Psat2g164160 Pisum sativum HOM05D005480 ORTHO05D006735 1.9e-129 466.8 419 68.0
Aqoxy5G01417 Aquilegia oxysepala HOM05D005480 ORTHO05D006735 2.5e-129 466.5 429 65.3
ECA232G3160 Erigeron canadensis HOM05D005480 ORTHO05D006735 2.8e-128 463.0 507 61.5
FvH4_1g14810 Fragaria vesca HOM05D005480 ORTHO05D006735 2.8e-128 463.0 430 63.5
FAN28G0426 Fragaria x ananassa HOM05D005480 ORTHO05D006735 2.8e-128 463.0 355 75.8
COL.COLO4_11327 Corchorus olitorius HOM05D005480 ORTHO05D006735 1.1e-127 461.1 329 77.2
FAN19G1500 Fragaria x ananassa HOM05D005480 ORTHO05D006735 5.2e-127 458.8 488 61.9
Nn6g32121 Nelumbo nucifera HOM05D005480 ORTHO05D006735 8.9e-127 458.0 489 65.6
FAN26G2127 Fragaria x ananassa HOM05D005480 ORTHO05D006735 1.2e-126 457.6 484 61.6
arahy.Tifrunner.gnm1.ann1.E9URZA Arachis hypogaea HOM05D005480 ORTHO05D006735 2.0e-126 456.8 472 66.1
PSO210G7251 Papaver somniferum HOM05D005480 ORTHO05D006735 1.7e-125 453.8 479 64.7
THA.LOC104819823 Tarenaya hassleriana HOM05D005480 ORTHO05D006735 8.4e-125 451.4 468 63.2
MBI16_g19897_MAGBIO Magnolia biondii HOM05D005480 ORTHO05D006735 7.1e-124 448.4 415 64.8
PSO170G5089 Papaver somniferum HOM05D005480 ORTHO05D006735 9.3e-124 448.0 483 64.8
SGA_v2.0_scaffold15G07231 Striga asiatica HOM05D005480 ORTHO05D006735 1.6e-123 447.2 478 61.3
vmacro05295 Vaccinium macrocarpon HOM05D005480 ORTHO05D006735 7.8e-123 444.9 368 70.9
Lsat_1_v5_gn_4_179460 Lactuca sativa HOM05D005480 ORTHO05D006735 3.0e-122 443.0 500 59.0
CAN.G836.34 Capsicum annuum HOM05D005480 ORTHO05D006735 3.3e-121 439.5 380 67.4
Thhalv10025060m.g Eutrema salsugineum HOM05D005480 ORTHO05D006735 9.6e-121 438.0 502 59.6
Nitab4.5_0001014g0070 Nicotiana tabacum HOM05D005480 ORTHO05D006735 9.6e-121 438.0 380 67.4
Sabra07G0032600 Salix brachista HOM05D005480 ORTHO05D006735 1.3e-120 437.6 397 67.5
Nitab4.5_0000108g0300 Nicotiana tabacum HOM05D005480 ORTHO05D006735 2.1e-120 436.8 380 67.6
Sp7g34650 Schrenkiella parvula HOM05D005480 ORTHO05D006735 4.0e-119 432.6 523 58.5
Carub.0007s0332 Capsella rubella HOM05D005480 ORTHO05D006735 2.6e-118 429.9 498 60.0
CDE01G0732 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 4.9e-117 425.6 487 61.0
AT4G37130 Arabidopsis thaliana HOM05D005480 ORTHO05D006735 4.6e-115 419.1 426 61.7
AL7G13910 Arabidopsis lyrata HOM05D005480 ORTHO05D006735 1.0e-114 417.9 504 59.3
unitig_899.g14972 Utricularia gibba HOM05D005480 ORTHO05D006735 5.1e-114 415.6 445 59.8
ATR0733G143 Amborella trichopoda HOM05D005480 ORTHO05D006735 1.1e-113 414.5 461 57.0
CARHR245380 Cardamine hirsuta HOM05D005480 ORTHO05D006735 7.4e-113 411.8 406 62.1
Aa31LG6G13860 Aethionema arabicum HOM05D005480 ORTHO05D006735 1.6e-112 410.6 340 64.7
BraA01t00184Z Brassica rapa HOM05D005480 ORTHO05D006735 1.4e-111 407.5 497 56.1
SHI08751 Sapria himalayana HOM05D005480 ORTHO05D006735 3.1e-111 406.4 442 57.9
A01p01950 Brassica napus HOM05D005480 ORTHO05D006735 5.3e-111 405.6 508 55.7
Haze_15193 Corylus avellana HOM05D005480 ORTHO05D006735 5.3e-111 405.6 350 71.4
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 2.2e-109 400.2 273 77.3
CDE02G2721 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 3.8e-109 399.4 292 71.6
AUR62003828 Chenopodium quinoa HOM05D005480 ORTHO05D006735 3.0e-106 389.8 384 61.5
BcaB03g12366 Brassica carinata HOM05D005480 ORTHO05D006735 7.4e-105 385.2 495 53.9
BolC3t20222H Brassica oleracea HOM05D005480 ORTHO05D006735 4.0e-103 379.4 427 57.8
BcaC01g00434 Brassica carinata HOM05D005480 ORTHO05D006735 2.6e-102 376.7 427 58.1
C03p79710 Brassica napus HOM05D005480 ORTHO05D006735 2.6e-102 376.7 427 58.1
BcaNung03510 Brassica carinata HOM05D005480 ORTHO05D006735 3.4e-102 376.3 509 55.6
GSVIVG01005079001 Vitis vinifera HOM05D005480 ORTHO05D006735 4.9e-101 372.5 238 80.7
A08p22500 Brassica napus HOM05D005480 ORTHO05D006735 8.4e-101 371.7 489 52.8
C01p02120 Brassica napus HOM05D005480 ORTHO05D006735 8.4e-101 371.7 440 56.6
BolC1t00204H Brassica oleracea HOM05D005480 ORTHO05D006735 8.4e-101 371.7 440 54.8
BraA08t34205Z Brassica rapa HOM05D005480 ORTHO05D006735 1.4e-100 370.9 488 53.5
Ca_24802_v3 Cicer arietinum L. HOM05D005480 ORTHO05D006735 1.4e-100 370.9 368 63.6
arahy.Tifrunner.gnm1.ann1.HXIH5S Arachis hypogaea HOM05D005480 ORTHO05D006735 1.9e-97 360.5 359 63.8
AUR62001975 Chenopodium quinoa HOM05D005480 ORTHO05D006735 1.6e-96 357.5 364 59.3
Os09g0453500 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 6.3e-96 355.5 484 51.0
Lalb_Chr05g0213141 Lupinus albus HOM05D005480 ORTHO05D006735 1.9e-92 344.0 251 71.7
Zm00001eb314700 Zea mays HOM05D005480 ORTHO05D006735 6.9e-87 325.5 421 49.2
BcaB03g12364 Brassica carinata HOM05D005480 ORTHO05D006735 2.9e-85 320.1 494 47.8
Zm00001eb100530 Zea mays HOM05D005480 ORTHO05D006735 6.7e-82 308.9 420 46.9
AagrBONN_evm.TU.Sc2ySwM_117.4106 Anthoceros agrestis HOM05D005480 ORTHO05D006735 1.1e-79 301.6 340 51.8
SGA_v2.0_scaffold135G34951 Striga asiatica HOM05D005480 ORTHO05D006735 1.5e-73 281.2 391 50.9
Mapoly0027s0041 Marchantia polymorpha HOM05D005480 ORTHO05D006735 2.1e-67 260.8 418 42.8
Ah.03g144040 Amaranthus hybridus HOM05D005480 ORTHO05D006735 8.8e-66 255.4 227 58.1
Pp3c24_6760 Physcomitrium patens HOM05D005480 ORTHO05D006735 1.8e-63 247.7 411 44.3
HPP92_016040 Vanilla planifolia HOM05D005480 ORTHO05D006735 7.0e-63 245.7 205 58.5
SEGI_40098 Sequoiadendron giganteum HOM05D005480 ORTHO05D006735 8.0e-59 232.3 329 48.9
Os03g0765400 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 3.2e-52 210.3 368 40.8
CBR_g66690 Chara braunii HOM05D005480 ORTHO05D006735 4.0e-50 203.4 452 38.7
Psat5g148720 Pisum sativum HOM05D005480 ORTHO05D006735 8.0e-43 179.1 197 58.4
Mapoly0016s0112 Marchantia polymorpha HOM05D005480 ORTHO05D006735 5.2e-42 176.4 291 38.8
Cpa.g.c44085 Carica papaya HOM05D005480 ORTHO05D006735 5.9e-38 162.9 194 59.3
Sabra07G0033400 Salix brachista HOM05D005480 ORTHO05D006735 2.3e-29 134.4 285 42.8
Sabra07G0032900 Salix brachista HOM05D005480 ORTHO05D006735 1.5e-28 131.7 285 42.1
Sabra07G0033100 Salix brachista HOM05D005480 ORTHO05D006735 1.9e-28 131.3 285 42.1
HPP92_016039 Vanilla planifolia HOM05D005480 ORTHO05D006735 5.2e-26 123.2 71 83.1
Ah.03g144030 Amaranthus hybridus HOM05D005480 ORTHO05D006735 9.2e-15 85.9 127 51.2
Cre16.g685217 Chlamydomonas reinhardtii HOM05D005480 ORTHO05D006735 6.6e-13 79.7 305 27.5
C04p28170 Brassica napus HOM05D005480 ORTHO05D006735 8.7e-13 79.3 98 52.0
BolC4t24360H Brassica oleracea HOM05D005480 ORTHO05D006735 8.7e-13 79.3 98 52.0
BcaC02g10502 Brassica carinata HOM05D005480 ORTHO05D006735 5.6e-12 76.6 49 73.5
PRCOL_00002206 Prasinoderma coloniale HOM05D005480 ORTHO05D006735 2.1e-11 74.7 338 24.6
C04p33290 Brassica napus HOM05D005480 ORTHO05D006735 3.4e-09 67.4 112 44.6
BolC4t24894H Brassica oleracea HOM05D005480 ORTHO05D006735 4.9e-08 63.5 99 47.5
GSVIVG01006101001 Vitis vinifera HOM05D005480 ORTHO05D006735 1.1e-07 62.4 76 60.5
CBR_g66696 Chara braunii HOM05D005480 ORTHO05D006735 3.5e-06 57.4 182 32.4


User provided reference genes

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