Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38554 Davidia involucrata HOM05D007081 ORTHO05D008834 1.1e-234 816.2 401 100.0
Lj5A128T65 Lonicera japonica HOM05D007081 ORTHO05D008834 2.9e-147 525.8 443 62.3
Rhsim12G0166600 Rhododendron simsii HOM05D007081 ORTHO05D008834 2.1e-145 519.6 377 69.5
TAR629G3400 Trochodendron aralioides HOM05D007081 ORTHO05D008834 3.6e-145 518.8 390 68.7
GSVIVG01007682001 Vitis vinifera HOM05D007081 ORTHO05D008834 3.7e-142 508.8 390 67.4
Cfa019177 Carpinus fangiana HOM05D007081 ORTHO05D008834 1.6e-140 503.4 392 65.3
Haze_07555 Corylus avellana HOM05D007081 ORTHO05D008834 5.9e-140 501.5 394 65.0
vmacro16631 Vaccinium macrocarpon HOM05D007081 ORTHO05D008834 1.3e-139 500.4 395 65.3
QL10p008493 Quercus lobata HOM05D007081 ORTHO05D008834 3.3e-138 495.7 390 64.4
QL10p008625 Quercus lobata HOM05D007081 ORTHO05D008834 4.3e-138 495.4 390 64.4
CANSAT80G0092 Cannabis sativa HOM05D007081 ORTHO05D008834 1.5e-127 460.3 369 62.6
DCAR_016469 Daucus carota HOM05D007081 ORTHO05D008834 4.9e-126 455.3 374 63.4
Cc04_g12600 Coffea canephora HOM05D007081 ORTHO05D008834 5.4e-125 451.8 375 63.2
MD14G1175400 Malus domestica HOM05D007081 ORTHO05D008834 1.1e-122 444.1 377 62.1
Thecc.03G023800 Theobroma cacao HOM05D007081 ORTHO05D008834 6.2e-121 438.3 379 61.2
Lsat_1_v5_gn_1_28080 Lactuca sativa HOM05D007081 ORTHO05D008834 2.0e-119 433.3 372 61.3
CiPaw.11G022400 Carya illinoinensis HOM05D007081 ORTHO05D008834 7.5e-119 431.4 383 60.3
TWI39G1151 Tripterygium wilfordii HOM05D007081 ORTHO05D008834 3.7e-118 429.1 391 59.3
PGR044G1978 Punica granatum HOM05D007081 ORTHO05D008834 2.4e-117 426.4 357 60.2
Duzib205G1440 Durio zibethinus HOM05D007081 ORTHO05D008834 5.4e-117 425.2 401 56.4
HanXRQChr04g0101311 Helianthus annuus HOM05D007081 ORTHO05D008834 5.4e-117 425.2 363 60.3
PGSC0003DMG400018175 Solanum tuberosum HOM05D007081 ORTHO05D008834 2.7e-116 422.9 373 61.1
Peaxi162Scf00089g01519 Petunia axillaris HOM05D007081 ORTHO05D008834 1.3e-115 420.6 367 60.2
Solyc03g112510.2 Solanum lycopersicum HOM05D007081 ORTHO05D008834 1.3e-115 420.6 368 60.9
Gorai.005G133700 Gossypium raimondii HOM05D007081 ORTHO05D008834 1.7e-115 420.2 389 57.8
Sopen03g031570 Solanum pennellii HOM05D007081 ORTHO05D008834 1.7e-115 420.2 368 60.6
Oeu040853.3 Olea europaea HOM05D007081 ORTHO05D008834 3.9e-115 419.1 389 57.3
Gohir.D02G120200 Gossypium hirsutum HOM05D007081 ORTHO05D008834 1.5e-114 417.2 389 57.3
FvH4_5g05850 Fragaria vesca HOM05D007081 ORTHO05D008834 9.5e-114 414.5 397 56.2
Manes.14G062600 Manihot esculenta HOM05D007081 ORTHO05D008834 1.2e-113 414.1 385 56.6
Sc04g0001640 Simmondsia chinensis HOM05D007081 ORTHO05D008834 2.8e-113 412.9 365 58.9
ECA247G4072 Erigeron canadensis HOM05D007081 ORTHO05D008834 8.1e-113 411.4 366 59.3
FAN08G1021 Fragaria x ananassa HOM05D007081 ORTHO05D008834 8.9e-112 407.9 391 56.3
CAN.G338.9 Capsicum annuum HOM05D007081 ORTHO05D008834 5.8e-111 405.2 392 57.4
RcHm_v2.0_Chr7g0192971 Rosa chinensis HOM05D007081 ORTHO05D008834 5.8e-111 405.2 407 56.0
Eucgr.K02814 Eucalyptus grandis HOM05D007081 ORTHO05D008834 2.4e-109 399.8 383 55.9
Nitab4.5_0010304g0020 Nicotiana tabacum HOM05D007081 ORTHO05D008834 1.2e-108 397.5 367 59.4
Lalb_Chr11g0070341 Lupinus albus HOM05D007081 ORTHO05D008834 4.6e-108 395.6 414 51.9
Phvul.009G175500 Phaseolus vulgaris HOM05D007081 ORTHO05D008834 5.1e-107 392.1 381 54.9
Migut.O00134 Erythranthe guttata HOM05D007081 ORTHO05D008834 1.9e-106 390.2 380 56.3
FAN18G1088 Fragaria x ananassa HOM05D007081 ORTHO05D008834 2.1e-105 386.7 434 50.5
Aqoxy3G02825 Aquilegia oxysepala HOM05D007081 ORTHO05D008834 8.1e-105 384.8 369 55.6
Ciclev10023760m.g Citrus clementina HOM05D007081 ORTHO05D008834 8.1e-105 384.8 387 55.8
Potri.002G197500 Populus trichocarpa HOM05D007081 ORTHO05D008834 3.1e-104 382.9 387 55.6
Glyma.04G186500 Glycine max HOM05D007081 ORTHO05D008834 6.9e-104 381.7 414 51.4
MBI10_g32034_MAGBIO Magnolia biondii HOM05D007081 ORTHO05D008834 2.0e-103 380.2 364 58.5
TPR.G31056 Trifolium pratense HOM05D007081 ORTHO05D008834 2.6e-103 379.8 413 49.9
SGA_v2.0_scaffold90G27870 Striga asiatica HOM05D007081 ORTHO05D008834 7.6e-103 378.3 398 53.5
arahy.Tifrunner.gnm1.ann1.4N1ELM Arachis hypogaea HOM05D007081 ORTHO05D008834 4.2e-101 372.5 372 54.0
PSO063G2349 Papaver somniferum HOM05D007081 ORTHO05D008834 2.3e-99 366.7 400 52.2
Sed0005220 Sechium edule HOM05D007081 ORTHO05D008834 2.3e-99 366.7 392 51.8
THA.LOC104809251 Tarenaya hassleriana HOM05D007081 ORTHO05D008834 3.0e-99 366.3 393 52.4
Lj1g0004270 Lotus japonicus HOM05D007081 ORTHO05D008834 4.3e-98 362.5 459 47.1
Ca_16151_v3 Cicer arietinum L. HOM05D007081 ORTHO05D008834 5.6e-98 362.1 400 52.8
Hund02770 Selenicereus undatus HOM05D007081 ORTHO05D008834 3.6e-97 359.4 433 49.9
Sabra02G0160000 Salix brachista HOM05D007081 ORTHO05D008834 1.2e-95 354.4 444 48.9
Psat0s2597g0120 Pisum sativum HOM05D007081 ORTHO05D008834 1.5e-95 354.0 388 51.3
PSO832G3615 Papaver somniferum HOM05D007081 ORTHO05D008834 2.6e-95 353.2 398 50.5
unitig_26.g9614 Utricularia gibba HOM05D007081 ORTHO05D008834 9.9e-95 351.3 334 55.7
Aa31LG2G16580 Aethionema arabicum HOM05D007081 ORTHO05D008834 2.7e-92 343.2 410 48.3
Thhalv10025133m.g Eutrema salsugineum HOM05D007081 ORTHO05D008834 3.3e-90 336.3 348 52.0
Sp7g31890 Schrenkiella parvula HOM05D007081 ORTHO05D008834 1.6e-89 334.0 382 49.7
arahy.Tifrunner.gnm1.ann1.G5F0QK Arachis hypogaea HOM05D007081 ORTHO05D008834 3.6e-89 332.8 344 52.9
BraA01t00418Z Brassica rapa HOM05D007081 ORTHO05D008834 1.2e-87 327.8 384 47.7
Carub.0007s0626 Capsella rubella HOM05D007081 ORTHO05D008834 2.0e-87 327.0 432 45.8
AL7G17230 Arabidopsis lyrata HOM05D007081 ORTHO05D008834 3.4e-87 326.2 431 43.6
MELO3C026274.2 Cucumis melo HOM05D007081 ORTHO05D008834 4.5e-87 325.9 384 50.8
ATR1152G054 Amborella trichopoda HOM05D007081 ORTHO05D008834 4.9e-86 322.4 385 50.4
A01p04290 Brassica napus HOM05D007081 ORTHO05D008834 6.4e-86 322.0 380 47.4
Ah.02g110780 Amaranthus hybridus HOM05D007081 ORTHO05D008834 8.4e-86 321.6 366 50.5
C01p04690 Brassica napus HOM05D007081 ORTHO05D008834 1.4e-85 320.9 354 50.3
BolC1t00453H Brassica oleracea HOM05D007081 ORTHO05D008834 1.4e-85 320.9 354 50.3
AT4G34140 Arabidopsis thaliana HOM05D007081 ORTHO05D008834 2.4e-85 320.1 429 44.1
Medtr3g077300 Medicago truncatula HOM05D007081 ORTHO05D008834 5.5e-85 318.9 380 48.9
Nitab4.5_0001284g0100 Nicotiana tabacum HOM05D007081 ORTHO05D008834 9.3e-85 318.2 271 62.4
EL10Ac5g10689 Beta vulgaris HOM05D007081 ORTHO05D008834 7.9e-84 315.1 379 49.3
AUR62008170 Chenopodium quinoa HOM05D007081 ORTHO05D008834 3.0e-83 313.2 389 48.1
CsaV3_1G001260 Cucumis sativus L. HOM05D007081 ORTHO05D008834 7.4e-82 308.5 365 49.9
CDE06G1300 Ceratophyllum demersum HOM05D007081 ORTHO05D008834 8.1e-81 305.1 367 48.2
CSS0021917 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 1.8e-80 303.9 271 59.0
FAN04G1276 Fragaria x ananassa HOM05D007081 ORTHO05D008834 9.0e-80 301.6 392 46.7
Cpa.g.sc35.77 Carica papaya HOM05D007081 ORTHO05D008834 1.7e-78 297.4 251 61.4
CSS0002377 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 5.5e-77 292.4 248 61.3
AUR62028747 Chenopodium quinoa HOM05D007081 ORTHO05D008834 1.3e-75 287.7 274 55.8
ClCG06G017230 Citrullus lanatus HOM05D007081 ORTHO05D008834 6.7e-75 285.4 378 45.8
COL.COLO4_30124 Corchorus olitorius HOM05D007081 ORTHO05D008834 1.6e-73 280.8 361 45.4
HPP92_000312 Vanilla planifolia HOM05D007081 ORTHO05D008834 8.5e-70 268.5 396 41.2
Zm00001eb122970 Zea mays HOM05D007081 ORTHO05D008834 4.6e-68 262.7 375 42.1
Os01g0170100 Oryza sativa ssp. japonica HOM05D007081 ORTHO05D008834 6.3e-65 252.3 283 48.1
Gohir.A03G091750 Gossypium hirsutum HOM05D007081 ORTHO05D008834 3.8e-62 243.0 215 58.6
Prupe.5G169300 Prunus persica HOM05D007081 ORTHO05D008834 4.6e-60 236.1 196 64.3
SEGI_13994 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 6.5e-54 215.7 440 35.2
HPP92_000296 Vanilla planifolia HOM05D007081 ORTHO05D008834 3.9e-51 206.5 357 38.4
AagrBONN_evm.TU.Sc2ySwM_117.2172 Anthoceros agrestis HOM05D007081 ORTHO05D008834 1.6e-47 194.5 518 29.5
Glyma.06G179301 Glycine max HOM05D007081 ORTHO05D008834 1.6e-47 194.5 211 52.1
CARHR242710 Cardamine hirsuta HOM05D007081 ORTHO05D008834 6.1e-44 182.6 182 53.8
Mapoly0102s0046 Marchantia polymorpha HOM05D007081 ORTHO05D008834 1.4e-43 181.4 438 33.3
Pp3c25_4990 Physcomitrium patens HOM05D007081 ORTHO05D008834 1.3e-41 174.9 277 36.5
HPP92_000303 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.8e-40 171.0 211 46.0
CSS0048681 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 1.1e-32 145.2 89 76.4
SGA_v2.0_scaffold90G27873 Striga asiatica HOM05D007081 ORTHO05D008834 3.8e-30 136.7 151 52.3
Cpa.g.sc35.79 Carica papaya HOM05D007081 ORTHO05D008834 5.5e-29 132.9 115 60.0
Oeu015893.1 Olea europaea HOM05D007081 ORTHO05D008834 1.6e-28 131.3 169 48.5
CBR_g4092 Chara braunii HOM05D007081 ORTHO05D000048 1.4e-27 128.3 401 27.4
CSS0035417 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 5.7e-26 122.9 84 71.4
HPP92_000304 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.6e-20 104.8 109 52.3
Nitab4.5_0022301g0010 Nicotiana tabacum HOM05D007081 ORTHO05D008834 8.0e-20 102.4 126 46.8
CAN.G12.29 Capsicum annuum HOM05D001989 ORTHO05D000346 1.2e-15 88.6 121 43.8
arahy.Tifrunner.gnm1.ann1.JE9H0F Arachis hypogaea HOM05D007081 ORTHO05D008834 9.5e-13 79.0 297 27.3
SEGI_21151 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 9.8e-10 68.9 96 43.8
Potri.004G081800 Populus trichocarpa HOM05D005384 ORTHO05D006477 1.7e-06 58.2 119 37.0
Solyc08g077310.3 Solanum lycopersicum HOM05D005384 ORTHO05D006477 3.9e-06 57.0 155 32.3
ATR0743G115 Amborella trichopoda HOM05D005384 ORTHO05D006477 5.0e-06 56.6 174 28.7
SMO367G0074 Selaginella moellendorffii HOM05D005384 ORTHO05D006477 5.0e-06 56.6 101 36.6
CSS0000239 Camellia sinensis var. sinensis HOM05D005384 ORTHO05D006477 6.6e-06 56.2 123 35.0
CSS0043592 Camellia sinensis var. sinensis HOM05D005384 ORTHO05D006477 6.6e-06 56.2 123 35.0
vmacro14142 Vaccinium macrocarpon HOM05D005384 ORTHO05D006477 6.6e-06 56.2 130 31.5
Sabra04G0054400 Salix brachista HOM05D005384 ORTHO05D006477 8.6e-06 55.8 119 37.0


User provided reference genes

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