Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38016 Davidia involucrata HOM05D003521 ORTHO05D000476 1.3e-58 229.6 119 100.0
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 5.4e-49 197.6 118 87.3
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 4.0e-44 181.4 118 80.5
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 3.4e-43 178.3 118 80.5
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 3.4e-43 178.3 117 77.8
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 3.8e-42 174.9 118 79.7
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 8.4e-42 173.7 118 78.8
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 2.7e-40 168.7 118 77.1
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 1.8e-39 166.0 118 74.6
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 2.5e-38 162.2 117 73.5
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 2.1e-37 159.1 110 77.3
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 8.1e-37 157.1 114 73.7
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 8.1e-37 157.1 116 71.6
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 9.0e-36 153.7 116 72.4
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.7e-34 149.4 109 71.6
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 3.8e-34 148.3 120 68.3
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 3.8e-34 148.3 115 68.7
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 8.4e-34 147.1 118 69.5
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.1e-33 146.7 109 71.6
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 1.1e-33 146.7 109 71.6
Oeu024072.1 Olea europaea HOM05D003521 ORTHO05D000476 1.9e-33 146.0 118 66.1
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 4.2e-33 144.8 110 70.0
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 4.2e-33 144.8 109 69.7
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 4.2e-33 144.8 109 69.7
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 9.3e-33 143.7 137 62.8
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 1.3e-31 139.8 117 66.7
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 1.8e-31 139.4 118 68.6
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 3.0e-31 138.7 136 59.6
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 5.1e-31 137.9 108 67.6
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 1.5e-30 136.3 99 74.7
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 2.5e-30 135.6 120 61.7
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 2.5e-30 135.6 99 74.7
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 3.3e-30 135.2 104 71.2
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 5.7e-30 134.4 117 64.1
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 9.6e-30 133.7 114 61.4
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 2.1e-29 132.5 117 63.2
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 2.1e-29 132.5 116 62.1
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 6.2e-29 131.0 152 54.6
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 8.2e-29 130.6 98 69.4
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 1.4e-28 129.8 131 56.5
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 1.8e-28 129.4 121 59.5
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 1.8e-28 129.4 118 63.6
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 2.4e-28 129.0 117 65.0
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 3.1e-28 128.6 117 61.5
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 4.1e-28 128.3 106 65.1
Cpa.g.c33209.1 Carica papaya HOM05D003521 ORTHO05D000476 6.9e-28 127.5 103 68.9
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 6.9e-28 127.5 107 65.4
Oeu024073.1 Olea europaea HOM05D003521 ORTHO05D000476 2.0e-27 125.9 100 68.0
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 2.0e-27 125.9 115 62.6
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 2.0e-27 125.9 121 60.3
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 2.6e-27 125.6 98 66.3
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 3.4e-27 125.2 107 61.7
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 5.8e-27 124.4 108 61.1
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 1.0e-26 123.6 106 63.2
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 1.3e-26 123.2 98 66.3
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 2.2e-26 122.5 132 54.5
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 3.8e-26 121.7 119 59.7
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 5.0e-26 121.3 113 59.3
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 5.0e-26 121.3 98 65.3
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 6.5e-26 120.9 107 61.7
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 6.5e-26 120.9 115 64.3
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 8.4e-26 120.6 132 57.6
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.1e-25 120.2 100 63.0
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 1.4e-25 119.8 115 60.9
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 1.9e-25 119.4 114 57.9
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 1.9e-25 119.4 100 63.0
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 4.2e-25 118.2 101 60.4
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 5.5e-25 117.9 114 54.4
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 7.2e-25 117.5 101 61.4
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 7.2e-25 117.5 86 67.4
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 9.3e-25 117.1 115 58.3
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.2e-24 116.7 104 62.5
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 1.2e-24 116.7 133 52.6
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 1.6e-24 116.3 107 63.6
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 2.7e-24 115.5 86 66.3
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 3.5e-24 115.2 117 58.1
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 4.6e-24 114.8 117 59.0
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 6.1e-24 114.4 134 51.5
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 6.1e-24 114.4 118 58.5
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 7.9e-24 114.0 101 61.4
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 1.0e-23 113.6 134 52.2
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 1.0e-23 113.6 134 51.5
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 1.0e-23 113.6 136 50.7
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 3.9e-23 111.7 118 61.0
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 6.7e-23 110.9 83 68.7
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 8.7e-23 110.5 107 60.7
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 1.1e-22 110.2 132 51.5
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 1.5e-22 109.8 108 61.1
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.5e-22 109.8 99 57.6
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 1.9e-22 109.4 81 71.6
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 5.7e-22 107.8 134 50.7
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 5.7e-22 107.8 99 56.6
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 5.7e-22 107.8 99 56.6
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 1.3e-21 106.7 118 53.4
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 6.3e-21 104.4 94 61.7
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 6.3e-21 104.4 98 56.1
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 6.3e-21 104.4 100 64.0
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 2.4e-20 102.4 118 55.1
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 3.1e-20 102.1 136 51.5
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 3.1e-20 102.1 134 50.0
Dinv43032 Davidia involucrata HOM05D038150 ORTHO05D000476 5.3e-20 101.3 62 87.1
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 5.3e-20 101.3 129 51.2
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 6.9e-20 100.9 103 58.3
Zm00001eb343530 Zea mays HOM05D003521 ORTHO05D000476 9.0e-20 100.5 117 53.8
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 1.2e-19 100.1 113 55.8
Dinv23957 Davidia involucrata HOM05D038150 ORTHO05D000476 1.5e-19 99.8 60 88.3
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 2.0e-19 99.4 113 57.5
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 2.6e-19 99.0 107 55.1
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 7.7e-19 97.4 117 53.0
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 1.7e-18 96.3 140 45.7
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 2.2e-18 95.9 100 53.0
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 2.2e-18 95.9 100 53.0
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 3.8e-18 95.1 95 54.7
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 5.0e-18 94.7 108 50.9
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 1.4e-17 93.2 90 56.7
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 1.4e-17 93.2 119 52.1
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 2.5e-17 92.4 114 49.1
Dinv25317 Davidia involucrata HOM05D000055 ORTHO05D000057 2.5e-17 92.4 59 84.7
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 3.2e-17 92.0 136 47.1
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 4.6e-16 88.2 122 46.7
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 1.4e-15 86.7 115 46.1
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 1.8e-15 86.3 89 56.2
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 5.1e-15 84.7 123 48.0
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 5.7e-14 81.3 90 56.7
SEGI_27505 Sequoiadendron giganteum HOM05D003521 ORTHO05D000476 2.2e-13 79.3 81 50.6
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 4.8e-13 78.2 128 43.8
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 6.9e-12 74.3 136 41.9
Lsat_1_v5_gn_4_102580 Lactuca sativa HOM05D003521 ORTHO05D000476 6.9e-12 74.3 117 43.6
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 4.5e-11 71.6 78 53.8
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 3.6e-08 62.0 110 40.9
unitig_52.g17084 Utricularia gibba HOM05D003521 ORTHO05D000476 1.4e-07 60.1 48 60.4
Medtr2g043010 Medicago truncatula HOM05D003521 ORTHO05D000476 6.7e-07 57.8 45 62.2
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 8.8e-07 57.4 106 40.6
EL10Ac6g13433 Beta vulgaris HOM05D000200 ORTHO05D000262 7.4e-06 54.3 46 60.9


User provided reference genes

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