Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35334 Davidia involucrata HOM05D006156 ORTHO05D007699 5.9e-68 260.8 134 100.0
Actinidia08649 Actinidia chinensis HOM05D006156 ORTHO05D007699 6.2e-25 117.9 128 54.7
Dinv29283 Davidia involucrata HOM05D006156 ORTHO05D007699 2.0e-23 112.8 126 55.6
Hma1.2p1_1507F.1_g287590 Hydrangea macrophylla HOM05D006156 ORTHO05D007699 2.6e-23 112.5 96 65.6
DCAR_008923 Daucus carota HOM05D006156 ORTHO05D007699 3.2e-21 105.5 110 51.8
RcHm_v2.0_Chr1g0380631 Rosa chinensis HOM05D006156 ORTHO05D007699 8.6e-19 97.4 112 50.0
Rhsim03G0208700 Rhododendron simsii HOM05D006156 ORTHO05D007699 3.3e-18 95.5 65 76.9
FvH4_2g09580 Fragaria vesca HOM05D006156 ORTHO05D007699 5.6e-18 94.7 113 47.8
FAN24G0640 Fragaria x ananassa HOM05D006156 ORTHO05D007699 5.6e-18 94.7 113 47.8
Aqoxy5G04292 Aquilegia oxysepala HOM05D006156 ORTHO05D007699 9.5e-18 94.0 99 46.5
CSS0009368 Camellia sinensis var. sinensis HOM05D006156 ORTHO05D007699 2.1e-17 92.8 66 72.7
PGR142G3289 Punica granatum HOM05D006156 ORTHO05D007699 2.1e-17 92.8 68 70.6
vmacro22634 Vaccinium macrocarpon HOM05D006156 ORTHO05D007699 3.6e-17 92.0 81 60.5
Cfa016229 Carpinus fangiana HOM05D006156 ORTHO05D007699 8.1e-17 90.9 67 71.6
QL09p009182 Quercus lobata HOM05D006156 ORTHO05D007699 8.1e-17 90.9 69 71.0
CANSAT21G2038 Cannabis sativa HOM05D006156 ORTHO05D007699 4.0e-16 88.6 68 69.1
CsaV3_3G019910 Cucumis sativus L. HOM05D006156 ORTHO05D007699 8.9e-16 87.4 68 66.2
COL.COLO4_16762 Corchorus olitorius HOM05D006156 ORTHO05D007699 1.2e-15 87.0 66 68.2
Haze_00212 Corylus avellana HOM05D006156 ORTHO05D007699 1.2e-15 87.0 66 69.7
Eucgr.K00382 Eucalyptus grandis HOM05D006156 ORTHO05D007699 1.2e-15 87.0 68 67.6
MELO3C008493.2 Cucumis melo HOM05D006156 ORTHO05D007699 2.0e-15 86.3 68 66.2
Duzib068G0148 Durio zibethinus HOM05D006156 ORTHO05D007699 2.6e-15 85.9 66 66.7
Lj1g0013962 Lotus japonicus HOM05D006156 ORTHO05D007699 4.4e-15 85.1 65 66.2
Prupe.2G310200 Prunus persica HOM05D006156 ORTHO05D007699 5.8e-15 84.7 68 63.2
TPR.G19387 Trifolium pratense HOM05D006156 ORTHO05D007699 1.3e-14 83.6 66 63.6
TPR.G27732 Trifolium pratense HOM05D006156 ORTHO05D007699 1.3e-14 83.6 66 63.6
TWI23G0795 Tripterygium wilfordii HOM05D006156 ORTHO05D007699 1.7e-14 83.2 66 62.1
BcaC07g39395 Brassica carinata HOM05D006156 ORTHO05D007699 2.9e-14 82.4 98 43.9
Lalb_Chr11g0066861 Lupinus albus HOM05D006156 ORTHO05D007699 4.9e-14 81.6 67 61.2
Atru.chr12.2193 Acer truncatum HOM05D006156 ORTHO05D007699 6.4e-14 81.3 66 65.2
arahy.Tifrunner.gnm1.ann1.KWX84I Arachis hypogaea HOM05D006156 ORTHO05D007699 8.4e-14 80.9 66 62.1
Glyma.06G128900 Glycine max HOM05D006156 ORTHO05D007699 1.1e-13 80.5 64 62.5
Lj1P1017T24 Lonicera japonica HOM05D006156 ORTHO05D007699 1.1e-13 80.5 63 68.3
Lalb_Chr08g0240251 Lupinus albus HOM05D006156 ORTHO05D007699 1.1e-13 80.5 66 60.6
THA.LOC104814928 Tarenaya hassleriana HOM05D006156 ORTHO05D007699 1.1e-13 80.5 96 50.0
Ciclev10019365m.g Citrus clementina HOM05D006156 ORTHO05D007699 1.4e-13 80.1 66 62.1
Sed0021439 Sechium edule HOM05D006156 ORTHO05D007699 1.4e-13 80.1 65 64.6
Manes.01G183200 Manihot esculenta HOM05D006156 ORTHO05D007699 2.4e-13 79.3 68 60.3
TWI39G0515 Tripterygium wilfordii HOM05D006156 ORTHO05D007699 2.4e-13 79.3 66 59.1
VMungo1309G2471 Vigna mungo HOM05D006156 ORTHO05D007699 2.4e-13 79.3 64 60.9
BcaB01g00735 Brassica carinata HOM05D006156 ORTHO05D007699 3.2e-13 79.0 70 55.7
Carub.0005s1546 Capsella rubella HOM05D006156 ORTHO05D007699 3.2e-13 79.0 68 57.4
Glyma.04G235800 Glycine max HOM05D006156 ORTHO05D007699 3.2e-13 79.0 64 60.9
MD07G1288700 Malus domestica HOM05D006156 ORTHO05D007699 3.2e-13 79.0 68 58.8
Thecc.03G198800 Theobroma cacao HOM05D006156 ORTHO05D007699 3.2e-13 79.0 63 65.1
Medtr3g091460 Medicago truncatula HOM05D006156 ORTHO05D007699 7.1e-13 77.8 66 59.1
Ca_16706_v3 Cicer arietinum L. HOM05D006156 ORTHO05D007699 9.2e-13 77.4 65 63.1
Phvul.009G052600 Phaseolus vulgaris HOM05D006156 ORTHO05D007699 9.2e-13 77.4 63 60.3
AL5G28970 Arabidopsis lyrata HOM05D006156 ORTHO05D007699 1.2e-12 77.0 66 59.1
AT3G49240 Arabidopsis thaliana HOM05D006156 ORTHO05D007699 1.2e-12 77.0 66 59.1
Lj1P1020T11 Lonicera japonica HOM05D006156 ORTHO05D007699 1.2e-12 77.0 63 66.7
Lj3P904T49 Lonicera japonica HOM05D006156 ORTHO05D007699 1.6e-12 76.6 65 60.0
Oeu041055.1 Olea europaea HOM05D006156 ORTHO05D007699 1.6e-12 76.6 87 47.1
A06p18520 Brassica napus HOM05D006156 ORTHO05D007699 3.5e-12 75.5 132 34.1
BraA06t24930Z Brassica rapa HOM05D006156 ORTHO05D007699 3.5e-12 75.5 132 34.1
SHI02421 Sapria himalayana HOM05D006156 ORTHO05D007101 3.5e-12 75.5 63 61.9
Migut.F00214 Erythranthe guttata HOM05D006156 ORTHO05D007699 4.6e-12 75.1 66 56.1
Duzib205G1399 Durio zibethinus HOM05D006156 ORTHO05D007699 7.8e-12 74.3 63 63.5
Psat5g077680 Pisum sativum HOM05D006156 ORTHO05D007699 7.8e-12 74.3 65 58.5
TAR374G1306 Trochodendron aralioides HOM05D006156 ORTHO05D007699 7.8e-12 74.3 61 60.7
TAR629G3483 Trochodendron aralioides HOM05D006156 ORTHO05D007699 7.8e-12 74.3 61 60.7
TAR633G0899 Trochodendron aralioides HOM05D006156 ORTHO05D007699 1.0e-11 73.9 61 59.0
Aa31LG4G17650 Aethionema arabicum HOM05D006156 ORTHO05D007699 3.0e-11 72.4 66 53.0
Gohir.D11G015100 Gossypium hirsutum HOM05D006156 ORTHO05D007699 3.0e-11 72.4 64 57.8
Gorai.007G015500 Gossypium raimondii HOM05D006156 ORTHO05D007699 3.0e-11 72.4 64 57.8
Potri.012G015400 Populus trichocarpa HOM05D006156 ORTHO05D007699 3.9e-11 72.0 92 48.9
Sabra12G0016600 Salix brachista HOM05D006156 ORTHO05D007699 8.6e-11 70.9 92 47.8
Sp5g12840 Schrenkiella parvula HOM05D006156 ORTHO05D007699 8.6e-11 70.9 63 55.6
Solyc03g083280.4 Solanum lycopersicum HOM05D006156 ORTHO05D007699 1.1e-10 70.5 55 63.6
HanXRQChr15g0493581 Helianthus annuus HOM05D006156 ORTHO05D007699 1.5e-10 70.1 63 58.7
Sc25g0004880 Simmondsia chinensis HOM05D006156 ORTHO05D007699 1.5e-10 70.1 65 53.8
Lsat_1_v5_gn_2_18861 Lactuca sativa HOM05D006156 ORTHO05D007699 2.5e-10 69.3 64 57.8
Cc02_g01570 Coffea canephora HOM05D006156 ORTHO05D007699 3.3e-10 68.9 81 44.4
Sopen03g023030 Solanum pennellii HOM05D006156 ORTHO05D007699 4.3e-10 68.6 54 63.0
ECA232G2615 Erigeron canadensis HOM05D006156 ORTHO05D007699 7.3e-10 67.8 77 50.6
Hund19268 Selenicereus undatus HOM05D006156 ORTHO05D007699 7.3e-10 67.8 89 42.7
HanXRQChr17g0536281 Helianthus annuus HOM05D006156 ORTHO05D007699 9.6e-10 67.4 63 55.6
CARHR158100 Cardamine hirsuta HOM05D006156 ORTHO05D007699 1.6e-09 66.6 63 52.4
Dinv35656 Davidia involucrata HOM05D006156 ORTHO05D007699 2.1e-09 66.2 58 63.8
BraA01t02398Z Brassica rapa HOM05D006156 ORTHO05D007699 3.6e-09 65.5 63 50.8
Medtr1g113010 Medicago truncatula HOM05D006156 ORTHO05D007699 4.7e-09 65.1 67 52.2
PGSC0003DMG400009084 Solanum tuberosum HOM05D006156 ORTHO05D007699 4.7e-09 65.1 51 62.7
SGA_v2.0_scaffold192G40548 Striga asiatica HOM05D006156 ORTHO05D007699 6.2e-09 64.7 63 49.2
Nitab4.5_0000548g0160 Nicotiana tabacum HOM05D006156 ORTHO05D007699 1.1e-08 63.9 93 40.9
FAN15G3345 Fragaria x ananassa HOM05D006156 ORTHO05D007699 1.8e-08 63.2 117 35.9
CAN.G481.4 Capsicum annuum HOM05D006156 ORTHO05D007699 2.4e-08 62.8 50 62.0
FAN20G0818 Fragaria x ananassa HOM05D006156 ORTHO05D007699 4.0e-08 62.0 118 34.7
AUR62033717 Chenopodium quinoa HOM05D006156 ORTHO05D007699 6.8e-08 61.2 65 47.7
CiPaw.05G196700 Carya illinoinensis HOM05D006156 ORTHO05D007699 8.9e-08 60.8 88 46.6
SGA_v2.0_scaffold44G16801 Striga asiatica HOM05D006156 ORTHO05D007699 7.6e-07 57.8 84 40.5
Gohir.A11G015000 Gossypium hirsutum HOM05D006156 ORTHO05D007699 9.9e-07 57.4 52 53.8
EL10As2g23245 Beta vulgaris HOM05D006156 ORTHO05D007699 1.7e-06 56.6 64 45.3
Ah.10g031910 Amaranthus hybridus HOM05D006156 ORTHO05D007699 6.4e-06 54.7 64 43.8


User provided reference genes

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