Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35104 Davidia involucrata HOM05D004159 ORTHO05D005858 6.0e-197 690.6 351 100.0
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 1.0e-164 583.6 394 77.4
Rhsim10G0017800 Rhododendron simsii HOM05D004159 ORTHO05D005858 8.8e-164 580.5 394 76.9
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 1.3e-162 576.6 394 76.6
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 7.7e-160 567.4 394 76.1
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 1.0e-159 567.0 398 74.6
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 1.0e-156 557.0 394 73.1
Peaxi162Scf00700g00427 Petunia axillaris HOM05D004159 ORTHO05D005858 6.7e-156 554.3 394 74.6
DCAR_021719 Daucus carota HOM05D004159 ORTHO05D005858 2.2e-154 549.3 394 73.4
Lj7C599T6 Lonicera japonica HOM05D004159 ORTHO05D005858 2.8e-154 548.9 394 73.6
Cc07_g01750 Coffea canephora HOM05D004159 ORTHO05D005858 8.3e-154 547.4 397 71.5
Nitab4.5_0003930g0060 Nicotiana tabacum HOM05D004159 ORTHO05D005858 3.1e-153 545.4 380 75.5
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 7.0e-153 544.3 394 73.1
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 9.1e-153 543.9 397 72.0
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 1.2e-152 543.5 394 71.6
Solyc07g047670.3 Solanum lycopersicum HOM05D004159 ORTHO05D005858 1.1e-150 537.0 394 72.1
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 1.9e-150 536.2 395 71.1
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 1.9e-150 536.2 395 71.4
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 5.5e-150 534.6 394 70.6
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 9.4e-150 533.9 394 70.8
PGSC0003DMG400006122 Solanum tuberosum HOM05D004159 ORTHO05D005858 3.6e-149 531.9 409 70.2
SGA_v2.0_scaffold32G13248 Striga asiatica HOM05D004159 ORTHO05D005858 1.0e-148 530.4 397 70.8
CiPaw.04G028300 Carya illinoinensis HOM05D004159 ORTHO05D005858 4.0e-148 528.5 395 70.1
Migut.B00156 Erythranthe guttata HOM05D004159 ORTHO05D005858 5.2e-148 528.1 397 69.8
Migut.N01406 Erythranthe guttata HOM05D004159 ORTHO05D005858 1.2e-147 526.9 397 69.8
Nitab4.5_0006221g0020 Nicotiana tabacum HOM05D004159 ORTHO05D005858 2.6e-147 525.8 414 69.6
Haze_14736 Corylus avellana HOM05D004159 ORTHO05D005858 1.8e-145 519.6 395 69.1
CAN.G1819.1 Capsicum annuum HOM05D004159 ORTHO05D005858 7.0e-145 517.7 398 70.4
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 1.2e-144 516.9 392 68.9
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 1.3e-143 513.5 394 67.8
Cfa007372 Carpinus fangiana HOM05D004159 ORTHO05D005858 8.6e-143 510.8 395 68.1
SalBow6G0855 Salvia bowleyana HOM05D004159 ORTHO05D005858 1.4e-140 503.4 397 67.8
Prupe.3G291100 Prunus persica HOM05D004159 ORTHO05D005858 5.2e-140 501.5 391 67.3
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 6.8e-140 501.1 392 66.6
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 8.9e-140 500.7 394 66.5
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 2.6e-139 499.2 328 80.8
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 3.7e-138 495.4 392 65.3
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 3.7e-138 495.4 397 66.2
Lsat_1_v5_gn_2_51000 Lactuca sativa HOM05D004159 ORTHO05D005858 4.9e-138 495.0 394 66.8
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 1.4e-137 493.4 394 67.0
HanXRQChr14g0462651 Helianthus annuus HOM05D004159 ORTHO05D005858 2.0e-136 489.6 394 65.7
HanXRQChr04g0114031 Helianthus annuus HOM05D004159 ORTHO05D005858 5.9e-136 488.0 394 65.2
Manes.17G112500 Manihot esculenta HOM05D004159 ORTHO05D005858 1.0e-135 487.3 392 65.1
Prupe.8G015200 Prunus persica HOM05D004159 ORTHO05D005858 1.0e-135 487.3 393 64.6
Prupe.8G015700 Prunus persica HOM05D004159 ORTHO05D005858 1.7e-135 486.5 393 64.4
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 2.3e-135 486.1 377 67.4
AL6G25270 Arabidopsis lyrata HOM05D004159 ORTHO05D005858 2.9e-135 485.7 394 65.7
THA.LOC104824006 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 6.6e-135 484.6 394 65.0
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 1.5e-134 483.4 394 65.2
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 1.5e-134 483.4 395 65.1
CARHR198790 Cardamine hirsuta HOM05D004159 ORTHO05D005858 5.6e-134 481.5 394 65.0
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 7.3e-134 481.1 393 64.6
Aa31LG11G15290 Aethionema arabicum HOM05D004159 ORTHO05D005858 1.2e-133 480.3 394 64.5
MD09G1027600 Malus domestica HOM05D004159 ORTHO05D005858 1.2e-133 480.3 391 64.2
ATR1132G032 Amborella trichopoda HOM05D004159 ORTHO05D005858 2.1e-133 479.6 394 62.9
Aqoxy5G03802 Aquilegia oxysepala HOM05D004159 ORTHO05D005858 2.1e-133 479.6 394 64.7
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 2.8e-133 479.2 394 65.5
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 2.8e-133 479.2 393 64.9
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 2.8e-133 479.2 393 64.9
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 2.8e-133 479.2 395 64.6
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 6.1e-133 478.0 394 65.2
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 6.1e-133 478.0 394 65.2
A03p06670 Brassica napus HOM05D004159 ORTHO05D005858 1.0e-132 477.2 394 65.2
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 1.4e-132 476.9 409 62.6
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 1.4e-132 476.9 393 64.6
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 1.4e-132 476.9 393 64.4
AT5G14520 Arabidopsis thaliana HOM05D004159 ORTHO05D005858 1.8e-132 476.5 394 64.7
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 1.8e-132 476.5 393 64.4
Sp6g29490 Schrenkiella parvula HOM05D004159 ORTHO05D005858 2.3e-132 476.1 394 65.0
BraA03t10001Z Brassica rapa HOM05D004159 ORTHO05D005858 6.8e-132 474.6 394 65.0
Prupe.4G071200 Prunus persica HOM05D004159 ORTHO05D005858 2.6e-131 472.6 393 63.4
THA.LOC104822401 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 3.4e-131 472.2 394 64.0
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 1.7e-130 469.9 391 62.9
Os03g0699200 Oryza sativa ssp. japonica HOM05D004159 ORTHO05D005858 2.9e-130 469.2 394 61.7
Zm00001eb053960 Zea mays HOM05D004159 ORTHO05D005858 4.9e-130 468.4 407 61.4
Hma1.2p1_0999F.1_g246250 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.1e-129 467.2 313 78.3
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 1.9e-129 466.5 396 62.9
Oeu048622.3 Olea europaea HOM05D004159 ORTHO05D005858 7.0e-129 464.5 375 65.9
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 1.2e-128 463.8 395 63.8
PSO017G2175 Papaver somniferum HOM05D004159 ORTHO05D005858 2.7e-128 462.6 394 63.2
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 7.8e-128 461.1 386 64.0
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 7.8e-128 461.1 393 62.6
Phvul.007G070900 Phaseolus vulgaris HOM05D004159 ORTHO05D005858 8.6e-127 457.6 396 61.1
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 1.9e-126 456.4 391 63.2
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 3.3e-126 455.7 395 62.3
VMungo0720G1997 Vigna mungo HOM05D004159 ORTHO05D005858 3.3e-126 455.7 396 61.4
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea HOM05D004159 ORTHO05D005858 7.3e-126 454.5 396 60.6
ECA248G2726 Erigeron canadensis HOM05D004159 ORTHO05D005858 9.5e-126 454.1 357 66.4
FAN25G3844 Fragaria x ananassa HOM05D004159 ORTHO05D005858 2.1e-125 453.0 391 62.4
unitig_21.g20810 Utricularia gibba HOM05D004159 ORTHO05D005858 4.7e-125 451.8 397 63.2
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 6.2e-125 451.4 395 60.0
FvH4_3g26080 Fragaria vesca HOM05D004159 ORTHO05D005858 6.2e-125 451.4 391 62.1
FAN11G1291 Fragaria x ananassa HOM05D004159 ORTHO05D005858 6.2e-125 451.4 391 62.1
Carub.0006s1270 Capsella rubella HOM05D004159 ORTHO05D005858 1.4e-124 450.3 375 64.5
FAN21G3616 Fragaria x ananassa HOM05D004159 ORTHO05D005858 1.8e-124 449.9 391 62.4
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 4.0e-124 448.7 395 62.0
FAN16G1867 Fragaria x ananassa HOM05D004159 ORTHO05D005858 5.2e-124 448.4 391 61.9
EL10Ac8g19455 Beta vulgaris HOM05D004159 ORTHO05D005858 1.2e-123 447.2 394 62.4
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 2.6e-123 446.0 397 59.9
Glyma.03G234900 Glycine max HOM05D004159 ORTHO05D005858 4.4e-123 445.3 396 59.1
Glyma.19G232500 Glycine max HOM05D004159 ORTHO05D005858 9.8e-123 444.1 395 58.5
Hma1.2p1_2964F.1_g330970 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.7e-122 443.4 307 76.2
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 2.2e-122 443.0 397 59.4
AUR62040779 Chenopodium quinoa HOM05D004159 ORTHO05D005858 6.4e-122 441.4 394 60.7
AUR62040778 Chenopodium quinoa HOM05D004159 ORTHO05D005858 8.3e-122 441.0 394 60.7
Psat0s1782g0040 Pisum sativum HOM05D004159 ORTHO05D005858 8.3e-122 441.0 398 59.8
Medtr7g100040 Medicago truncatula HOM05D004159 ORTHO05D005858 3.2e-121 439.1 396 59.3
Lalb_Chr02g0160481 Lupinus albus HOM05D004159 ORTHO05D005858 7.1e-121 438.0 397 58.9
Lalb_Chr06g0175751 Lupinus albus HOM05D004159 ORTHO05D005858 7.1e-121 438.0 398 59.3
Nitab4.5_0008375g0010 Nicotiana tabacum HOM05D004159 ORTHO05D005858 1.3e-119 433.7 363 65.3
Ah.09g231680 Amaranthus hybridus HOM05D004159 ORTHO05D005858 3.9e-119 432.2 402 60.0
PSO764G0137 Papaver somniferum HOM05D004159 ORTHO05D005858 1.1e-118 430.6 394 56.6
TPR.G1071 Trifolium pratense HOM05D004159 ORTHO05D005858 3.3e-118 429.1 398 58.3
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 2.8e-117 426.0 397 58.7
Ca_26485_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 4.4e-115 418.7 388 58.8
PSO478G0945 Papaver somniferum HOM05D004159 ORTHO05D005858 9.9e-115 417.5 380 60.5
Lsat_1_v5_gn_4_179560 Lactuca sativa HOM05D004159 ORTHO05D005858 1.3e-111 407.1 394 57.6
AUR62029204 Chenopodium quinoa HOM05D004159 ORTHO05D005858 3.3e-110 402.5 380 59.7
Sopen07g024120 Solanum pennellii HOM05D004159 ORTHO05D005858 2.1e-109 399.8 310 69.0
SEGI_02382 Sequoiadendron giganteum HOM05D004159 ORTHO05D005858 8.9e-108 394.4 412 52.9
Medtr8g010330 Medicago truncatula HOM05D004159 ORTHO05D005858 1.5e-107 393.7 396 56.1
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 3.2e-105 386.0 389 55.0
HPP92_005716 Vanilla planifolia HOM05D004159 ORTHO05D005858 1.3e-103 380.6 395 55.7
Ca_22754_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 3.5e-96 355.9 349 57.0
AagrBONN_evm.TU.Sc2ySwM_362.1908 Anthoceros agrestis HOM05D004159 ORTHO05D005858 4.6e-96 355.5 408 48.8
SMO356G0182 Selaginella moellendorffii HOM05D004159 ORTHO05D005858 2.6e-91 339.7 390 49.2
Pp3c3_23250 Physcomitrium patens HOM05D004159 ORTHO05D005858 7.9e-88 328.2 392 46.7
Mapoly0138s0023 Marchantia polymorpha HOM05D004159 ORTHO05D005858 1.8e-87 327.0 392 46.7
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea HOM05D004159 ORTHO05D005858 1.6e-80 303.9 227 69.2
CBR_g38896 Chara braunii HOM05D004159 ORTHO05D005858 1.7e-74 283.9 452 40.3
MCO04G526 Micromonas commoda HOM05D004159 ORTHO05D005858 2.2e-74 283.5 385 42.6
Zm00001eb053940 Zea mays HOM05D004159 ORTHO05D005858 8.2e-69 265.0 239 59.0
Cre16.g683793 Chlamydomonas reinhardtii HOM05D004159 ORTHO05D005858 1.1e-68 264.6 498 36.3
PRCOL_00002170 Prasinoderma coloniale HOM05D004159 ORTHO05D005858 5.1e-63 245.7 390 39.5
Sc03g0007500 Simmondsia chinensis HOM05D004159 ORTHO05D005858 1.1e-62 244.6 202 64.4
TPR.G27000 Trifolium pratense HOM05D004159 ORTHO05D005858 2.0e-59 233.8 300 46.7
Haze_26879 Corylus avellana HOM05D004159 ORTHO05D005858 9.7e-54 214.9 394 36.5
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 8.8e-47 191.8 420 35.0
Sc03g0007510 Simmondsia chinensis HOM05D004159 ORTHO05D005858 2.2e-45 187.2 159 61.6
RcHm_v2.0_Chr5g0047861 Rosa chinensis HOM05D004159 ORTHO05D036595 2.4e-44 183.7 182 56.6
Gohir.D06G181800 Gossypium hirsutum HOM05D004159 ORTHO05D021100 4.2e-41 172.9 122 70.5
Gorai.013G041700 Gossypium raimondii HOM05D004159 ORTHO05D005858 3.1e-36 156.8 118 67.8
Gohir.D13G037150 Gossypium hirsutum HOM05D004159 ORTHO05D021100 4.1e-36 156.4 118 67.8
Actinidia33332 Actinidia chinensis HOM05D004159 ORTHO05D002141 1.5e-33 147.9 80 87.5
Ca_31061_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 7.2e-33 145.6 174 52.3
Psat1g081880 Pisum sativum HOM05D004159 ORTHO05D019349 5.2e-31 139.4 83 78.3
HanXRQChr05g0138871 Helianthus annuus HOM05D004159 ORTHO05D005858 2.7e-27 127.1 118 57.6
PSO675G5574 Papaver somniferum HOM05D004159 ORTHO05D302046 7.7e-27 125.6 293 35.2
SEGI_01298 Sequoiadendron giganteum HOM05D004159 ORTHO05D021100 8.9e-23 112.1 83 68.7
Actinidia35769 Actinidia chinensis HOM05D004159 ORTHO05D021100 1.8e-20 104.4 122 54.1
Medtr6g022610 Medicago truncatula HOM05D004159 ORTHO05D005858 4.1e-20 103.2 119 54.6
Aa31sc84G60 Aethionema arabicum HOM05D004159 ORTHO05D007259 7.0e-20 102.4 170 41.8
MD10G1043900 Malus domestica HOM05D004159 ORTHO05D036595 4.6e-19 99.8 138 40.6
MD13G1107200 Malus domestica HOM05D004159 ORTHO05D021100 1.8e-15 87.8 68 64.7
RcHm_v2.0_Chr5g0047691 Rosa chinensis HOM05D004159 ORTHO05D036595 5.8e-14 82.8 61 65.6
Medtr6g022550 Medicago truncatula HOM05D004159 ORTHO05D005858 4.6e-11 73.2 85 52.9
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 5.0e-10 69.7 91 47.3
Lj2g0001382 Lotus japonicus HOM05D004159 ORTHO05D235994 2.5e-09 67.4 56 55.4
Zm00001eb053920 Zea mays HOM05D004159 ORTHO05D021100 4.7e-08 63.2 41 73.2
Gohir.D10G229800 Gossypium hirsutum HOM05D000561 ORTHO05D000514 3.1e-07 60.5 35 80.0


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