Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34262 Davidia involucrata HOM05D001251 ORTHO05D004135 0.0e+00 1088.6 562 100.0
QL08p047700 Quercus lobata HOM05D001251 ORTHO05D004135 1.7e-180 636.7 559 65.7
Duzib138G1188 Durio zibethinus HOM05D001251 ORTHO05D004135 1.1e-179 634.0 556 65.5
Hma1.2p1_0074F.1_g038840 Hydrangea macrophylla HOM05D001251 ORTHO05D004135 6.1e-175 618.2 558 65.1
Haze_15754 Corylus avellana HOM05D001251 ORTHO05D004135 1.5e-173 613.6 557 64.5
Dinv32652 Davidia involucrata HOM05D001251 ORTHO05D004135 2.6e-170 602.8 480 72.3
Cfa003724 Carpinus fangiana HOM05D001251 ORTHO05D004135 1.3e-169 600.5 556 64.2
Actinidia01529 Actinidia chinensis HOM05D001251 ORTHO05D004135 1.9e-168 596.7 540 64.1
Prupe.2G200400 Prunus persica HOM05D001251 ORTHO05D004135 4.7e-167 592.0 557 62.1
Thecc.01G332000 Theobroma cacao HOM05D001251 ORTHO05D004135 4.7e-167 592.0 540 64.3
Cpa.g.sc57.78 Carica papaya HOM05D001251 ORTHO05D004135 2.6e-165 586.3 542 63.3
Gohir.A12G117500 Gossypium hirsutum HOM05D001251 ORTHO05D004135 5.7e-165 585.1 540 63.1
Ciclev10018964m.g Citrus clementina HOM05D001251 ORTHO05D004135 9.8e-165 584.3 554 61.9
Gorai.008G132000 Gossypium raimondii HOM05D001251 ORTHO05D004135 2.8e-164 582.8 548 62.6
Gohir.D12G121100 Gossypium hirsutum HOM05D001251 ORTHO05D004135 3.7e-164 582.4 540 63.1
TAR374G0209 Trochodendron aralioides HOM05D001251 ORTHO05D004135 3.7e-164 582.4 556 62.2
Potri.002G180800 Populus trichocarpa HOM05D001251 ORTHO05D004135 1.3e-161 573.9 557 60.3
Potri.014G106800 Populus trichocarpa HOM05D001251 ORTHO05D004135 3.2e-160 569.3 557 60.3
CiPaw.01G085700 Carya illinoinensis HOM05D001251 ORTHO05D004135 1.6e-159 567.0 563 61.5
Hma1.2p1_2492F.1_g323260 Hydrangea macrophylla HOM05D001251 ORTHO05D004135 8.0e-159 564.7 560 60.5
Duzib133G0065 Durio zibethinus HOM05D001251 ORTHO05D004135 5.2e-158 562.0 539 60.9
Gorai.008G131800 Gossypium raimondii HOM05D001251 ORTHO05D004135 2.0e-157 560.1 549 61.4
vmacro12634 Vaccinium macrocarpon HOM05D001251 ORTHO05D004135 1.3e-156 557.4 558 60.0
Atru.chr5.788 Acer truncatum HOM05D001251 ORTHO05D004135 9.1e-155 551.2 533 61.4
Nitab4.5_0005359g0030 Nicotiana tabacum HOM05D001251 ORTHO05D004135 1.0e-153 547.7 554 57.8
CSS0039199 Camellia sinensis var. sinensis HOM05D001251 ORTHO05D004135 1.3e-153 547.4 559 60.1
TWI14G1269 Tripterygium wilfordii HOM05D001251 ORTHO05D004135 2.5e-152 543.1 568 56.9
Manes.01G239000 Manihot esculenta HOM05D001251 ORTHO05D004135 1.2e-151 540.8 538 58.6
Gohir.A11G101800 Gossypium hirsutum HOM05D001251 ORTHO05D004135 2.1e-151 540.0 536 59.7
MSTRG.4794 Avicennia marina HOM05D001251 ORTHO05D004135 3.6e-151 539.3 563 57.9
Manes.05G015600 Manihot esculenta HOM05D001251 ORTHO05D004135 1.5e-149 533.9 552 57.1
CiPaw.02G045300 Carya illinoinensis HOM05D001251 ORTHO05D004135 2.0e-149 533.5 583 57.8
TAR629G3201 Trochodendron aralioides HOM05D001251 ORTHO05D004135 5.7e-149 531.9 549 57.9
Sabra02G0133600 Salix brachista HOM05D001251 ORTHO05D004135 9.2e-147 524.6 561 56.0
Nn1g00457 Nelumbo nucifera HOM05D001251 ORTHO05D004135 5.0e-145 518.8 558 56.3
Peaxi162Scf00092g01519 Petunia axillaris HOM05D001251 ORTHO05D004135 8.6e-145 518.1 582 55.0
Gohir.D11G106400 Gossypium hirsutum HOM05D001251 ORTHO05D004135 1.9e-144 516.9 539 58.3
Sabra14G0079000 Salix brachista HOM05D001251 ORTHO05D004135 2.5e-144 516.5 556 57.2
Gorai.007G113900 Gossypium raimondii HOM05D001251 ORTHO05D004135 5.6e-144 515.4 539 58.1
Glyma.07G048500 Glycine max HOM05D001251 ORTHO05D004135 3.6e-143 512.7 544 57.4
TWI23G1207 Tripterygium wilfordii HOM05D001251 ORTHO05D004135 4.0e-142 509.2 562 55.0
RcHm_v2.0_Chr1g0361301 Rosa chinensis HOM05D001251 ORTHO05D004135 1.5e-141 507.3 570 57.5
FvH4_7g17850 Fragaria vesca HOM05D001251 ORTHO05D004135 2.6e-141 506.5 571 56.7
FAN06G3608 Fragaria x ananassa HOM05D001251 ORTHO05D004135 5.8e-141 505.4 578 56.2
Glyma.16G017400 Glycine max HOM05D001251 ORTHO05D004135 5.8e-141 505.4 556 57.7
COL.COLO4_23060 Corchorus olitorius HOM05D001251 ORTHO05D004135 6.4e-140 501.9 541 56.6
FAN06G1969 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.9e-139 500.4 568 56.3
Gohir.D12G121000 Gossypium hirsutum HOM05D001251 ORTHO05D004135 1.9e-139 500.4 549 57.2
FAN03G0514 Fragaria x ananassa HOM05D001251 ORTHO05D004135 9.2e-139 498.0 574 55.6
Gohir.A12G117400 Gossypium hirsutum HOM05D001251 ORTHO05D004135 1.2e-138 497.7 549 56.8
FAN01G0834 Fragaria x ananassa HOM05D001251 ORTHO05D004135 3.5e-138 496.1 569 56.1
Medtr7g118330 Medicago truncatula HOM05D001251 ORTHO05D004135 2.3e-137 493.4 547 56.3
Oeu064410.3 Olea europaea HOM05D001251 ORTHO05D004135 3.0e-137 493.0 562 54.8
MD01G1090900 Malus domestica HOM05D001251 ORTHO05D004135 1.9e-136 490.3 575 53.6
Glyma.03G261800 Glycine max HOM05D001251 ORTHO05D004135 9.5e-136 488.0 560 55.7
Lj9C609G5 Lonicera japonica HOM05D001251 ORTHO05D004135 1.2e-135 487.6 573 57.2
Cc02_g39990 Coffea canephora HOM05D001251 ORTHO05D004135 1.6e-135 487.3 555 54.8
FAN10G0258 Fragaria x ananassa HOM05D001251 ORTHO05D004135 2.1e-135 486.9 569 55.7
VMungo0331G1277 Vigna mungo HOM05D001251 ORTHO05D004135 2.8e-135 486.5 534 56.6
Ca_09556_v3 Cicer arietinum L. HOM05D001251 ORTHO05D004135 3.6e-135 486.1 559 55.5
TPR.G4678 Trifolium pratense HOM05D001251 ORTHO05D004135 1.4e-134 484.2 561 54.4
CAN.G1150.2 Capsicum annuum HOM05D001251 ORTHO05D004135 1.8e-134 483.8 556 53.4
FAN01G1785 Fragaria x ananassa HOM05D001251 ORTHO05D004135 3.4e-133 479.6 569 55.0
Sopen10g001100 Solanum pennellii HOM05D001251 ORTHO05D004135 3.4e-133 479.6 553 53.7
FAN10G4260 Fragaria x ananassa HOM05D001251 ORTHO05D004135 5.8e-133 478.8 574 54.9
Glyma.19G260900 Glycine max HOM05D001251 ORTHO05D004135 1.3e-132 477.6 548 56.9
Solyc10g005080.3 Solanum lycopersicum HOM05D001251 ORTHO05D004135 2.2e-132 476.9 553 53.0
Migut.N01518 Erythranthe guttata HOM05D001251 ORTHO05D004135 2.9e-132 476.5 562 54.6
arahy.Tifrunner.gnm1.ann1.0U0SSW Arachis hypogaea HOM05D001251 ORTHO05D004135 1.0e-129 468.0 573 52.7
SalBow5G5002 Salvia bowleyana HOM05D001251 ORTHO05D004135 1.1e-128 464.5 567 52.9
Eucgr.D02651 Eucalyptus grandis HOM05D001251 ORTHO05D004135 2.5e-128 463.4 560 53.4
arahy.Tifrunner.gnm1.ann1.J7VJ5I Arachis hypogaea HOM05D001251 ORTHO05D004135 1.6e-127 460.7 573 51.8
Phvul.010G120401 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 1.6e-127 460.7 549 55.0
AUR62004570 Chenopodium quinoa HOM05D001251 ORTHO05D004135 9.9e-125 451.4 496 54.0
Oeu034954.1 Olea europaea HOM05D001251 ORTHO05D004135 8.4e-124 448.4 541 51.2
Lalb_Chr10g0100921 Lupinus albus HOM05D001251 ORTHO05D004135 5.4e-123 445.7 565 52.2
Actinidia28507 Actinidia chinensis HOM05D001251 ORTHO05D004135 1.6e-122 444.1 361 67.6
Psat3g000720 Pisum sativum HOM05D001251 ORTHO05D004135 1.6e-122 444.1 554 53.4
Lj3g0020484 Lotus japonicus HOM05D001251 ORTHO05D004135 4.6e-122 442.6 550 53.3
AUR62022683 Chenopodium quinoa HOM05D001251 ORTHO05D004135 6.0e-122 442.2 496 53.6
Hund16759 Selenicereus undatus HOM05D001251 ORTHO05D004135 1.3e-121 441.0 492 54.3
arahy.Tifrunner.gnm1.ann1.P5534Y Arachis hypogaea HOM05D001251 ORTHO05D004135 1.5e-120 437.6 566 50.7
arahy.Tifrunner.gnm1.ann1.GF54Z4 Arachis hypogaea HOM05D001251 ORTHO05D004135 1.2e-119 434.5 566 50.4
DCAR_006991 Daucus carota HOM05D001251 ORTHO05D004135 1.4e-115 421.0 555 49.0
EL10Ac1g00171 Beta vulgaris HOM05D001251 ORTHO05D004135 7.1e-115 418.7 493 50.5
MELO3C022302.2 Cucumis melo HOM05D001251 ORTHO05D004135 4.6e-114 416.0 547 49.7
Sc26g0000440 Simmondsia chinensis HOM05D001251 ORTHO05D004135 4.6e-114 416.0 518 51.4
Nitab4.5_0007792g0010 Nicotiana tabacum HOM05D001251 ORTHO05D004135 1.0e-113 414.8 554 47.8
MBI12_g27877_MAGBIO Magnolia biondii HOM05D001251 ORTHO05D004135 1.5e-112 411.0 570 49.1
MBI04_g18999_MAGBIO Magnolia biondii HOM05D001251 ORTHO05D004135 3.6e-111 406.4 573 49.6
ClCG06G002330 Citrullus lanatus HOM05D001251 ORTHO05D004135 4.8e-111 406.0 547 48.4
VMungo1309G2431 Vigna mungo HOM05D001251 ORTHO05D004135 6.2e-111 405.6 564 49.3
Lalb_Chr18g0044761 Lupinus albus HOM05D001251 ORTHO05D004135 4.9e-108 396.0 554 48.7
Phvul.009G259650 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 4.9e-108 396.0 557 49.4
CsaV3_6G008360 Cucumis sativus L. HOM05D001251 ORTHO05D004135 5.1e-105 386.0 538 46.8
PGR031G0915 Punica granatum HOM05D001251 ORTHO05D004135 6.6e-105 385.6 551 48.1
Phvul.009G259400 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 1.5e-104 384.4 556 48.7
Lalb_Chr15g0076591 Lupinus albus HOM05D001251 ORTHO05D004135 1.8e-102 377.5 553 48.6
Ah.05g178860 Amaranthus hybridus HOM05D001251 ORTHO05D004135 6.9e-102 375.6 538 46.7
Sed0027265 Sechium edule HOM05D001251 ORTHO05D004135 2.2e-100 370.5 549 46.1
PSO782G0772 Papaver somniferum HOM05D001251 ORTHO05D004135 1.1e-99 368.2 585 44.6
Sed0026128 Sechium edule HOM05D001251 ORTHO05D004135 1.0e-97 361.7 538 45.5
PSO063G2933 Papaver somniferum HOM05D001251 ORTHO05D004135 1.5e-96 357.8 588 45.1
ECA240G1436 Erigeron canadensis HOM05D001251 ORTHO05D004135 3.4e-93 346.7 558 45.5
unitig_45.g31541 Utricularia gibba HOM05D001251 ORTHO05D004135 7.9e-90 335.5 558 44.1
Aa31LG1G10420 Aethionema arabicum HOM05D001251 ORTHO05D004135 1.6e-87 327.8 553 44.1
THA.LOC104803067 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 4.8e-87 326.2 555 44.7
THA.LOC104825910 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 6.9e-86 322.4 552 44.0
Hund27142 Selenicereus undatus HOM05D001251 ORTHO05D004135 1.1e-83 315.1 410 48.5
TAR375G0588 Trochodendron aralioides HOM05D000031 ORTHO05D009544 1.0e-81 308.5 302 59.3
unitig_8.g3406 Utricularia gibba HOM05D001251 ORTHO05D004135 1.3e-81 308.1 478 47.1
THA.LOC104827645 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 4.3e-80 303.1 553 43.0
Aqoxy7G00001_Aqoxy7G00002 Aquilegia oxysepala HOM05D001251 ORTHO05D004135 1.4e-78 298.1 487 42.5
HanXRQChr15g0489581 Helianthus annuus HOM05D001251 ORTHO05D004135 1.0e-73 282.0 563 41.6
SGA_v2.0_scaffold232G43523 Striga asiatica HOM05D001251 ORTHO05D004135 8.2e-71 272.3 576 40.5
ATR0661G164 Amborella trichopoda HOM05D001251 ORTHO05D004135 1.2e-69 268.5 535 40.4
AT1G01060 Arabidopsis thaliana HOM05D001251 ORTHO05D004135 2.0e-69 267.7 554 39.2
unitig_22.g6823 Utricularia gibba HOM05D001251 ORTHO05D004135 4.5e-69 266.5 470 44.5
THA.LOC104815900 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 6.5e-68 262.7 556 39.0
HanXRQChr09g0264411 Helianthus annuus HOM05D001251 ORTHO05D004135 1.1e-67 261.9 561 39.6
unitig_8.g4997 Utricularia gibba HOM05D001251 ORTHO05D004135 7.2e-67 259.2 497 43.3
Carub.0001s0116 Capsella rubella HOM05D001251 ORTHO05D004135 1.1e-64 251.9 565 39.5
unitig_578.g16510 Utricularia gibba HOM05D001251 ORTHO05D004135 1.5e-64 251.5 458 41.5
Thhalv10007028m.g Eutrema salsugineum HOM05D001251 ORTHO05D004135 6.3e-63 246.1 555 38.0
HanXRQChr09g0264401 Helianthus annuus HOM05D001251 ORTHO05D004135 8.2e-63 245.7 565 40.2
AL1G11460 Arabidopsis lyrata HOM05D001251 ORTHO05D004135 1.8e-62 244.6 510 39.4
BcaB03g13553 Brassica carinata HOM05D001071 ORTHO05D004135 2.4e-62 244.2 533 38.1
Aa31LG1G28200 Aethionema arabicum HOM05D001251 ORTHO05D004135 1.9e-59 234.6 540 36.9
CARHR001420 Cardamine hirsuta HOM05D001251 ORTHO05D004135 1.8e-57 228.0 558 38.5
CDE04G0747 Ceratophyllum demersum HOM05D001251 ORTHO05D004135 4.0e-57 226.9 476 39.5
Sp1g01250 Schrenkiella parvula HOM05D001251 ORTHO05D004135 3.3e-56 223.8 426 40.6
Os08g0157600 Oryza sativa ssp. japonica HOM05D001251 ORTHO05D004135 7.5e-56 222.6 481 40.5
Zm00001eb172450 Zea mays HOM05D001251 ORTHO05D004135 6.3e-55 219.5 467 38.3
BraA10t42363Z Brassica rapa HOM05D001251 ORTHO05D004135 7.0e-54 216.1 486 39.5
BolC5t28872H Brassica oleracea HOM05D001251 ORTHO05D004135 7.7e-53 212.6 482 38.8
A10p00850 Brassica napus HOM05D001251 ORTHO05D004135 2.9e-52 210.7 486 39.1
C05p00880 Brassica napus HOM05D001251 ORTHO05D004135 1.5e-51 208.4 483 38.7
Lsat_1_v5_gn_3_140720 Lactuca sativa HOM05D001251 ORTHO05D004135 4.7e-50 203.4 550 36.9
Carub.0004s2954 Capsella rubella HOM05D001251 ORTHO05D004135 1.4e-46 191.8 555 33.7
Psat0s580g0080 Pisum sativum HOM05D001251 ORTHO05D004135 9.1e-46 189.1 178 62.9
BraA08t35670Z Brassica rapa HOM05D001251 ORTHO05D004135 1.5e-43 181.8 426 37.3
C03p00110 Brassica napus HOM05D001251 ORTHO05D004135 7.2e-43 179.5 478 36.0
Oeu032681.1 Olea europaea HOM05D001251 ORTHO05D004135 1.8e-41 174.9 188 51.6
Sp4g28860 Schrenkiella parvula HOM05D001251 ORTHO05D004135 3.0e-41 174.1 429 39.2
BcaB01g06139 Brassica carinata HOM05D001251 ORTHO05D004135 5.2e-41 173.3 406 37.7
BolC3t12576H Brassica oleracea HOM05D001251 ORTHO05D004135 5.2e-41 173.3 406 37.7
BolC7t40758H Brassica oleracea HOM05D001251 ORTHO05D004135 1.5e-40 171.8 547 33.3
A08p37730 Brassica napus HOM05D001251 ORTHO05D004135 2.8e-39 167.5 398 36.9
HPP92_002735 Vanilla planifolia HOM05D001251 ORTHO05D004135 7.7e-37 159.5 431 35.0
Prupe.2G200300 Prunus persica HOM05D001251 ORTHO05D004135 3.8e-36 157.1 193 52.3
AT2G46830 Arabidopsis thaliana HOM05D001251 ORTHO05D004135 1.2e-34 152.1 404 38.1
AL4G46300 Arabidopsis lyrata HOM05D001251 ORTHO05D004135 1.0e-33 149.1 405 37.8
Aqoxy7G03772 Aquilegia oxysepala HOM05D001251 ORTHO05D004135 6.8e-33 146.4 305 36.1
C04p01110 Brassica napus HOM05D001071 ORTHO05D004135 2.6e-32 144.4 495 33.7
Zm00001eb415760 Zea mays HOM05D001251 ORTHO05D004135 1.3e-31 142.1 209 48.8
BolC4t21764H Brassica oleracea HOM05D001071 ORTHO05D004135 2.9e-31 141.0 489 34.2
CARHR142180 Cardamine hirsuta HOM05D001251 ORTHO05D004135 2.9e-31 141.0 539 31.5
A05p00970 Brassica napus HOM05D001071 ORTHO05D004135 2.0e-29 134.8 458 34.3
BraA05t19097Z Brassica rapa HOM05D001071 ORTHO05D004135 2.0e-29 134.8 480 33.1
CDE12G0822 Ceratophyllum demersum HOM05D001251 ORTHO05D004135 6.6e-28 129.8 314 37.3
HanXRQChr15g0489571 Helianthus annuus HOM05D001251 ORTHO05D004135 3.3e-27 127.5 550 29.8
C07p03620 Brassica napus HOM05D001251 ORTHO05D004135 4.3e-27 127.1 521 30.7
BcaC06g36494 Brassica carinata HOM05D001251 ORTHO05D004135 5.8e-24 116.7 422 30.6
VMungo1383G3693 Vigna mungo HOM05D001251 ORTHO05D004135 1.2e-21 109.0 164 43.3
BcaC06g36496 Brassica carinata HOM05D001251 ORTHO05D004135 1.5e-19 102.1 249 37.8
HPP92_020838 Vanilla planifolia HOM05D001251 ORTHO05D004135 1.5e-19 102.1 375 32.3
HPP92_020743 Vanilla planifolia HOM05D001251 ORTHO05D004135 1.9e-19 101.7 398 32.4
FAN02G3085 Fragaria x ananassa HOM05D001251 ORTHO05D004135 7.3e-19 99.8 116 53.4
FAN03G1652 Fragaria x ananassa HOM05D001251 ORTHO05D004135 7.3e-19 99.8 116 53.4
FAN17G2333 Fragaria x ananassa HOM05D001251 ORTHO05D004135 9.5e-19 99.4 115 53.0
SGA_v2.0_scaffold43G16339 Striga asiatica HOM05D000071 ORTHO05D000029 3.6e-18 97.4 241 34.9
FAN24G2965 Fragaria x ananassa HOM05D001251 ORTHO05D004135 3.1e-17 94.4 115 51.3
BcaC07g37015 Brassica carinata HOM05D001251 ORTHO05D004135 8.9e-17 92.8 225 38.2
Oeu053268.1 Olea europaea HOM05D001251 ORTHO05D004135 7.8e-13 79.7 73 61.6
FAN15G2528 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.0e-12 79.3 102 50.0
BcaC02g12626 Brassica carinata HOM05D001251 ORTHO05D004135 3.0e-12 77.8 284 35.2
C07p03630 Brassica napus HOM05D001251 ORTHO05D004135 3.0e-12 77.8 181 34.3
BcaC06g36495 Brassica carinata HOM05D001251 ORTHO05D004135 6.6e-12 76.6 232 31.0
C08p00060 Brassica napus HOM05D001251 ORTHO05D004135 2.5e-11 74.7 189 36.5
SEGI_18839 Sequoiadendron giganteum HOM05D001251 ORTHO05D004135 2.5e-11 74.7 664 25.8
C08p00050 Brassica napus HOM05D001251 ORTHO05D004135 4.3e-11 73.9 196 34.2
BolC8t46805H Brassica oleracea HOM05D001251 ORTHO05D004135 4.3e-11 73.9 196 34.2
BcaC07g37009 Brassica carinata HOM05D001251 ORTHO05D004135 1.2e-10 72.4 199 33.7
Zm00001eb415770 Zea mays HOM05D001251 ORTHO05D004135 8.9e-09 66.2 95 38.9
BcaC02g12627 Brassica carinata HOM05D001071 ORTHO05D000932 3.4e-08 64.3 135 37.8


User provided reference genes

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