Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33592 Davidia involucrata HOM05D000228 ORTHO05D004880 5.0e-50 200.7 93 100.0
Nitab4.5_0004955g0050 Nicotiana tabacum HOM05D000228 ORTHO05D004880 2.3e-10 68.9 39 84.6
Nitab4.5_0000307g0250 Nicotiana tabacum HOM05D000228 ORTHO05D004880 3.0e-10 68.6 43 72.1
Cc02_g30260 Coffea canephora HOM05D000228 ORTHO05D004880 5.1e-10 67.8 39 79.5
CAN.G1045.38 Capsicum annuum HOM05D000228 ORTHO05D004880 6.6e-10 67.4 38 84.2
Solyc01g096390.4 Solanum lycopersicum HOM05D000228 ORTHO05D004880 6.6e-10 67.4 38 84.2
Sopen01g040120 Solanum pennellii HOM05D000228 ORTHO05D004880 6.6e-10 67.4 38 84.2
Lj7A585G29 Lonicera japonica HOM05D000228 ORTHO05D004880 8.7e-10 67.0 39 79.5
Eucgr.J01182 Eucalyptus grandis HOM05D000228 ORTHO05D004880 1.5e-09 66.2 38 81.6
SalBow5G3376 Salvia bowleyana HOM05D000228 ORTHO05D004880 2.5e-09 65.5 40 77.5
SalBow5G5050 Salvia bowleyana HOM05D000228 ORTHO05D004880 2.5e-09 65.5 40 77.5
TAR626G0107 Trochodendron aralioides HOM05D000228 ORTHO05D004880 2.5e-09 65.5 42 73.8
CiPaw.13G013500 Carya illinoinensis HOM05D000228 ORTHO05D004880 3.3e-09 65.1 39 79.5
Lsat_1_v5_gn_7_31901 Lactuca sativa HOM05D006097 ORTHO05D004880 3.3e-09 65.1 39 74.4
GSVIVG01013491001 Vitis vinifera HOM05D000228 ORTHO05D004880 4.3e-09 64.7 40 82.5
Sc11g0006440 Simmondsia chinensis HOM05D000228 ORTHO05D004880 7.3e-09 63.9 38 76.3
Thecc.10G157200 Theobroma cacao HOM05D000228 ORTHO05D004880 7.3e-09 63.9 37 75.7
COL.COLO4_20753 Corchorus olitorius HOM05D000228 ORTHO05D004880 9.6e-09 63.5 37 73.0
ECA236G0597 Erigeron canadensis HOM05D000228 ORTHO05D004880 9.6e-09 63.5 39 71.8
Atru.chr12.1341 Acer truncatum HOM05D000228 ORTHO05D004880 1.3e-08 63.2 39 71.8
EL10Ac2g02803 Beta vulgaris HOM05D000228 ORTHO05D004880 1.6e-08 62.8 38 73.7
HanXRQChr15g0481481 Helianthus annuus HOM05D000228 ORTHO05D004880 1.6e-08 62.8 39 69.2
Sabra03G0146600 Salix brachista HOM05D000228 ORTHO05D004880 1.6e-08 62.8 39 69.2
TWI15G0020 Tripterygium wilfordii HOM05D000228 ORTHO05D004880 1.6e-08 62.8 39 71.8
Zm00001eb207920 Zea mays HOM05D000228 ORTHO05D004880 1.6e-08 62.8 41 63.4
Ah.10g030570 Amaranthus hybridus HOM05D000228 ORTHO05D004880 2.1e-08 62.4 38 73.7
Lalb_Chr01g0007761 Lupinus albus HOM05D000228 ORTHO05D004880 3.6e-08 61.6 38 73.7
CSS0032728 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D004880 4.8e-08 61.2 42 61.9
Lalb_Chr03g0032731 Lupinus albus HOM05D000228 ORTHO05D004880 4.8e-08 61.2 38 73.7
Peaxi162Scf00767g00417 Petunia axillaris HOM05D000228 ORTHO05D004880 4.8e-08 61.2 43 69.8
VMungo1127G1028 Vigna mungo HOM05D000228 ORTHO05D004880 4.8e-08 61.2 40 70.0
Ciclev10004129m.g Citrus clementina HOM05D000228 ORTHO05D004880 6.2e-08 60.8 39 74.4
Os02g0152800 Oryza sativa ssp. japonica HOM05D000228 ORTHO05D004880 6.2e-08 60.8 43 55.8
Phvul.011G206900 Phaseolus vulgaris HOM05D000228 ORTHO05D004880 6.2e-08 60.8 40 65.0
Ca_23956_v3 Cicer arietinum L. HOM05D000228 ORTHO05D004880 8.1e-08 60.5 40 67.5
Ca_30886_v3 Cicer arietinum L. HOM05D000228 ORTHO05D004880 8.1e-08 60.5 40 67.5
Potri.003G196900 Populus trichocarpa HOM05D000228 ORTHO05D004880 8.1e-08 60.5 39 66.7
Prupe.2G035500 Prunus persica HOM05D000228 ORTHO05D004880 8.1e-08 60.5 38 81.6
Lj3g0006268 Lotus japonicus HOM05D000228 ORTHO05D004880 1.1e-07 60.1 38 71.1
MD02G1287600 Malus domestica HOM05D000228 ORTHO05D004880 1.1e-07 60.1 38 78.9
MD07G1039700 Malus domestica HOM05D000228 ORTHO05D004880 1.1e-07 60.1 38 78.9
Thhalv10016128m.g Eutrema salsugineum HOM05D000228 ORTHO05D004880 1.4e-07 59.7 38 71.1
Lj3g0014961 Lotus japonicus HOM05D000228 ORTHO05D004880 1.4e-07 59.7 38 73.7
RcHm_v2.0_Chr1g0324091 Rosa chinensis HOM05D000228 ORTHO05D004880 1.4e-07 59.7 39 69.2
Aa31LG5G19570 Aethionema arabicum HOM05D000228 ORTHO05D004880 1.8e-07 59.3 38 71.1
Aqoxy7G04198 Aquilegia oxysepala HOM05D000228 ORTHO05D004880 1.8e-07 59.3 38 65.8
HanXRQChr01g0022531 Helianthus annuus HOM05D000228 ORTHO05D004880 2.4e-07 58.9 38 65.8
Psat4g144400 Pisum sativum HOM05D000228 ORTHO05D004880 2.4e-07 58.9 39 66.7
Hund27778 Selenicereus undatus HOM05D000228 ORTHO05D004880 3.1e-07 58.5 38 65.8
Hund27781 Selenicereus undatus HOM05D000228 ORTHO05D004880 3.1e-07 58.5 38 65.8
TPR.G25062 Trifolium pratense HOM05D000228 ORTHO05D004880 3.1e-07 58.5 39 66.7
TPR.G27818 Trifolium pratense HOM05D000228 ORTHO05D004880 3.1e-07 58.5 39 66.7
Dinv22035 Davidia involucrata HOM05D000228 ORTHO05D004880 4.0e-07 58.2 42 71.4
Glyma.13G196900 Glycine max HOM05D000228 ORTHO05D004880 4.0e-07 58.2 38 63.2
SGA_v2.0_scaffold124G33613 Striga asiatica HOM05D000228 ORTHO05D004880 4.0e-07 58.2 35 77.1
arahy.Tifrunner.gnm1.ann1.50BPU8 Arachis hypogaea HOM05D000228 ORTHO05D004880 6.9e-07 57.4 38 68.4
arahy.Tifrunner.gnm1.ann1.K566NY Arachis hypogaea HOM05D000228 ORTHO05D004880 6.9e-07 57.4 38 68.4
Glyma.15G235900 Glycine max HOM05D000228 ORTHO05D004880 6.9e-07 57.4 39 61.5
Medtr8g038990 Medicago truncatula HOM05D000228 ORTHO05D004880 6.9e-07 57.4 39 64.1
Aqoxy6G01013 Aquilegia oxysepala HOM05D000228 ORTHO05D004880 9.0e-07 57.0 38 65.8
PSO782G2240 Papaver somniferum HOM05D000228 ORTHO05D004880 1.2e-06 56.6 35 65.7
vmacro12694 Vaccinium macrocarpon HOM05D000228 ORTHO05D004880 1.5e-06 56.2 38 76.3
MBI13_g09079_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 2.0e-06 55.8 39 66.7
HPP92_010995 Vanilla planifolia HOM05D000228 ORTHO05D004880 2.0e-06 55.8 39 59.0
Migut.B01227 Erythranthe guttata HOM05D000228 ORTHO05D004880 3.4e-06 55.1 42 69.0
PSO063G0693 Papaver somniferum HOM05D000228 ORTHO05D004880 3.4e-06 55.1 39 59.0
TWI38G1715 Tripterygium wilfordii HOM05D000228 ORTHO05D004880 5.8e-06 54.3 39 64.1
Nn6g31494 Nelumbo nucifera HOM05D000228 ORTHO05D004880 9.9e-06 53.5 29 72.4
Os01g0965000 Oryza sativa ssp. japonica HOM05D000228 ORTHO05D004880 9.9e-06 53.5 45 55.6


User provided reference genes

Program Settings