Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 6.1e-149 530.8 269 100.0
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 2.4e-129 465.7 270 87.8
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 1.6e-128 463.0 269 85.5
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 2.7e-128 462.2 269 85.9
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 2.5e-126 455.7 270 84.1
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 4.3e-126 454.9 268 86.2
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 6.8e-124 447.6 270 83.7
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 2.6e-123 445.7 270 83.0
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 5.8e-123 444.5 282 80.9
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 4.9e-122 441.4 268 79.5
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 1.7e-119 433.0 272 81.2
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 1.7e-119 433.0 270 82.2
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 3.0e-119 432.2 270 81.9
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 5.6e-118 427.9 270 80.0
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.6e-117 426.4 270 79.6
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 3.6e-117 425.2 272 79.0
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 1.4e-116 423.3 272 78.3
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 1.8e-116 422.9 271 79.0
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 1.8e-116 422.9 269 78.8
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 1.8e-116 422.9 270 78.1
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 1.8e-116 422.9 270 79.6
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 1.8e-116 422.9 269 80.7
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 2.3e-116 422.5 270 79.6
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 3.1e-116 422.2 256 86.7
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 3.1e-116 422.2 270 79.6
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 4.0e-116 421.8 270 78.9
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 1.2e-115 420.2 272 78.7
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 1.2e-115 420.2 270 80.4
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 1.5e-115 419.9 269 79.2
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 2.6e-115 419.1 271 78.2
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 3.4e-115 418.7 270 78.1
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 4.4e-115 418.3 271 79.3
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 5.8e-115 417.9 271 78.2
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 5.8e-115 417.9 270 78.5
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 5.8e-115 417.9 270 78.5
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 7.6e-115 417.5 269 79.9
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 7.6e-115 417.5 270 78.1
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 7.6e-115 417.5 271 79.0
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 1.7e-114 416.4 273 77.3
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 1.7e-114 416.4 269 77.0
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 2.2e-114 416.0 269 77.7
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 2.2e-114 416.0 269 77.0
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 2.2e-114 416.0 272 77.9
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.9e-114 415.6 270 77.4
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 3.8e-114 415.2 269 78.1
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 3.8e-114 415.2 285 76.1
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 4.9e-114 414.8 270 78.1
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 8.4e-114 414.1 269 76.6
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.1e-113 413.7 270 77.0
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.1e-113 413.7 270 77.0
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 1.4e-113 413.3 269 79.6
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.4e-113 413.3 272 77.6
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 2.4e-113 412.5 271 76.8
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 3.2e-113 412.1 270 77.0
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 3.2e-113 412.1 272 76.1
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 4.1e-113 411.8 269 76.2
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 7.1e-113 411.0 271 76.4
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 2.1e-112 409.5 269 76.2
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 2.1e-112 409.5 271 77.5
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 2.1e-112 409.5 282 75.5
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 2.7e-112 409.1 273 75.1
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 3.5e-112 408.7 281 75.4
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 4.6e-112 408.3 270 75.6
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 6.0e-112 407.9 269 75.8
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 6.0e-112 407.9 269 76.2
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 6.0e-112 407.9 272 76.5
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 6.0e-112 407.9 272 76.5
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 1.0e-111 407.1 295 71.5
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 1.3e-111 406.8 273 75.8
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 1.3e-111 406.8 271 76.0
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 1.3e-111 406.8 270 74.4
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 1.7e-111 406.4 284 73.6
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 1.7e-111 406.4 271 74.2
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 3.0e-111 405.6 269 75.1
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 6.6e-111 404.4 276 76.8
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 8.6e-111 404.1 270 75.2
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 1.5e-110 403.3 270 75.2
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 1.5e-110 403.3 272 73.5
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.9e-110 402.9 270 77.0
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 1.9e-110 402.9 297 72.4
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 2.5e-110 402.5 292 70.2
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 4.3e-110 401.7 269 76.6
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 4.3e-110 401.7 271 76.0
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 7.3e-110 401.0 270 75.9
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.1e-109 399.4 270 75.9
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 2.8e-109 399.1 271 74.2
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 1.1e-108 397.1 270 75.2
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 1.4e-108 396.7 271 74.5
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 3.1e-108 395.6 258 78.3
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 2.6e-107 392.5 271 74.9
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 4.4e-107 391.7 270 74.8
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 5.8e-107 391.3 305 66.9
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 5.8e-107 391.3 305 66.9
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 1.3e-106 390.2 329 63.5
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 2.2e-106 389.4 273 74.7
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 4.9e-106 388.3 253 77.1
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 1.4e-105 386.7 272 74.3
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 2.4e-105 386.0 269 74.0
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 4.6e-104 381.7 342 60.2
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 9.6e-102 374.0 269 70.6
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 9.6e-102 374.0 272 73.5
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 1.3e-101 373.6 269 70.6
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 2.8e-101 372.5 272 70.2
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 2.8e-101 372.5 272 70.2
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 3.6e-101 372.1 236 81.4
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 8.1e-101 370.9 269 68.8
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 8.1e-101 370.9 273 72.2
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 1.1e-100 370.5 273 70.0
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 4.0e-100 368.6 272 72.8
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 4.9e-98 361.7 272 72.8
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 4.9e-98 361.7 233 77.3
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 3.2e-97 359.0 331 61.9
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 9.3e-97 357.5 317 62.1
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 2.7e-96 355.9 230 77.4
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 2.7e-96 355.9 230 77.4
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 6.0e-96 354.8 275 69.8
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 1.0e-95 354.0 230 76.1
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 1.3e-95 353.6 272 66.5
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 1.8e-95 353.2 275 68.4
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 6.7e-95 351.3 272 67.3
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 1.1e-94 350.5 232 76.7
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 1.5e-94 350.1 272 67.3
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 3.3e-94 349.0 231 76.6
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 6.2e-93 344.7 272 66.2
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 2.4e-89 332.8 266 63.9
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 5.1e-87 325.1 269 66.2
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 5.1e-87 325.1 230 72.6
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 1.9e-86 323.2 278 63.7
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 1.9e-86 323.2 260 66.2
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 1.8e-84 316.6 358 52.5
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 2.0e-83 313.2 337 54.0
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 1.4e-81 307.0 266 61.7
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 3.2e-81 305.8 231 69.3
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 3.0e-79 299.3 283 59.4
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 1.5e-78 297.0 276 58.7
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 1.1e-76 290.8 233 67.4
CSS0002803 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 6.9e-76 288.1 175 83.4
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 9.0e-76 287.7 270 60.4
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 7.6e-75 284.6 228 64.0
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 1.3e-74 283.9 231 66.2
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 9.7e-70 267.7 181 76.8
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 1.8e-68 263.5 275 54.5
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 1.8e-68 263.5 258 58.1
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 3.1e-68 262.7 201 68.7
Duzib187G0149 Durio zibethinus HOM05D001715 ORTHO05D004824 1.9e-65 253.4 201 64.7
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 5.1e-63 245.4 260 53.1
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 2.6e-62 243.0 162 77.2
Mapoly0074s0018 Marchantia polymorpha HOM05D001715 ORTHO05D004824 9.7e-62 241.1 263 53.2
Medtr7g033170 Medicago truncatula HOM05D001715 ORTHO05D004824 9.7e-62 241.1 172 70.3
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 2.2e-61 240.0 260 51.5
Gorai.001G266500 Gossypium raimondii HOM05D001715 ORTHO05D004824 6.3e-61 238.4 175 69.1
ECA232G3480 Erigeron canadensis HOM05D001715 ORTHO05D004824 1.4e-57 227.3 130 83.8
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 2.1e-56 223.4 254 54.3
EL10As9g23941 Beta vulgaris HOM05D001715 ORTHO05D004824 1.8e-55 220.3 169 68.6
BolC2t11492H Brassica oleracea HOM05D001715 ORTHO05D004824 6.7e-55 218.4 160 68.8
PSO478G2184 Papaver somniferum HOM05D001715 ORTHO05D004824 6.7e-55 218.4 161 66.5
Cc07_g20220 Coffea canephora HOM05D001715 ORTHO05D004824 1.5e-54 217.2 213 57.7
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 4.4e-54 215.7 201 62.7
C02p54270 Brassica napus HOM05D001715 ORTHO05D004824 4.5e-51 205.7 153 68.0
AagrBONN_evm.TU.Sc2ySwM_344.5345 Anthoceros agrestis HOM05D001715 ORTHO05D004824 1.3e-45 187.6 234 47.0
SGA_v2.0_scaffold135G34914 Striga asiatica HOM05D001715 ORTHO05D004824 4.8e-45 185.7 133 73.7
Gohir.D07G231366 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.1e-44 184.5 125 72.8
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 4.1e-44 182.6 182 57.7
CBR_g1018 Chara braunii HOM05D001161 ORTHO05D000497 5.3e-44 182.2 142 68.3
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 3.8e-42 176.0 163 62.0
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 1.5e-41 174.1 232 45.7
SGA_v2.0_scaffold131G34424 Striga asiatica HOM05D001715 ORTHO05D004824 9.8e-38 161.4 270 41.9
SEGI_27231 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 3.5e-35 152.9 139 56.8
Oeu033726.1 Olea europaea HOM05D001715 ORTHO05D004824 9.8e-30 134.8 87 79.3
CiPaw.15G158300 Carya illinoinensis HOM05D001715 ORTHO05D004824 4.9e-29 132.5 91 75.8
Oeu021199.1 Olea europaea HOM05D001715 ORTHO05D004824 3.5e-27 126.3 74 83.8
Aqoxy3G03035 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 1.9e-25 120.6 149 52.3
CiPaw.15G157800 Carya illinoinensis HOM05D001715 ORTHO05D004824 6.1e-24 115.5 65 83.1
Oeu043035.1 Olea europaea HOM05D001715 ORTHO05D004824 5.7e-22 109.0 74 74.3
Mapoly0009s0091 Marchantia polymorpha HOM05D001715 ORTHO05D004824 8.3e-21 105.1 150 44.7
vmacro18297 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.1e-20 104.8 67 74.6
CSS0027227 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 1.4e-12 77.8 137 41.6
SEGI_06119 Sequoiadendron giganteum HOM05D001715 ORTHO05D000497 4.3e-09 66.2 41 73.2
CSS0016932 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 5.6e-09 65.9 42 76.2
HPP92_019650 Vanilla planifolia HOM05D001715 ORTHO05D004824 9.5e-09 65.1 174 32.2
CSS0014250 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 5.2e-07 59.3 34 85.3


User provided reference genes

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