Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv32652 Davidia involucrata HOM05D001251 ORTHO05D004135 2.5e-232 808.5 434 100.0
Dinv34262 Davidia involucrata HOM05D001251 ORTHO05D004135 1.7e-169 599.7 480 72.3
Duzib138G1188 Durio zibethinus HOM05D001251 ORTHO05D004135 2.6e-117 426.4 479 58.5
QL08p047700 Quercus lobata HOM05D001251 ORTHO05D004135 2.2e-116 423.3 481 57.0
Cpa.g.sc57.78 Carica papaya HOM05D001251 ORTHO05D004135 1.1e-115 421.0 473 56.0
Duzib133G0065 Durio zibethinus HOM05D001251 ORTHO05D004135 1.4e-115 420.6 435 60.5
Haze_15754 Corylus avellana HOM05D001251 ORTHO05D004135 2.7e-114 416.4 475 56.2
Cfa003724 Carpinus fangiana HOM05D001251 ORTHO05D004135 6.7e-113 411.8 471 57.1
Potri.014G106800 Populus trichocarpa HOM05D001251 ORTHO05D004135 4.8e-111 405.6 477 54.1
Gohir.A12G117500 Gossypium hirsutum HOM05D001251 ORTHO05D004135 1.8e-110 403.7 479 55.1
Gohir.D12G121100 Gossypium hirsutum HOM05D001251 ORTHO05D004135 4.1e-110 402.5 479 55.3
Prupe.2G200400 Prunus persica HOM05D001251 ORTHO05D004135 4.1e-110 402.5 474 55.5
Gorai.008G132000 Gossypium raimondii HOM05D001251 ORTHO05D004135 6.9e-110 401.7 479 55.3
Hma1.2p1_0074F.1_g038840 Hydrangea macrophylla HOM05D001251 ORTHO05D004135 6.9e-110 401.7 481 57.2
Gorai.008G131800 Gossypium raimondii HOM05D001251 ORTHO05D004135 6.5e-108 395.2 477 54.5
Potri.002G180800 Populus trichocarpa HOM05D001251 ORTHO05D004135 6.5e-108 395.2 474 55.1
Thecc.01G332000 Theobroma cacao HOM05D001251 ORTHO05D004135 8.5e-108 394.8 482 55.8
Hma1.2p1_2492F.1_g323260 Hydrangea macrophylla HOM05D001251 ORTHO05D004135 1.4e-107 394.0 473 56.2
Ciclev10018964m.g Citrus clementina HOM05D001251 ORTHO05D004135 3.2e-107 392.9 468 54.7
TAR374G0209 Trochodendron aralioides HOM05D001251 ORTHO05D004135 4.6e-106 389.0 479 55.5
Gohir.A11G101800 Gossypium hirsutum HOM05D001251 ORTHO05D004135 4.3e-104 382.5 479 52.6
TWI14G1269 Tripterygium wilfordii HOM05D001251 ORTHO05D004135 1.4e-102 377.5 485 51.5
Atru.chr5.788 Acer truncatum HOM05D001251 ORTHO05D004135 3.1e-102 376.3 467 52.9
Nitab4.5_0005359g0030 Nicotiana tabacum HOM05D001251 ORTHO05D004135 2.0e-101 373.6 473 51.8
Gohir.D11G106400 Gossypium hirsutum HOM05D001251 ORTHO05D004135 2.6e-101 373.2 477 52.8
vmacro12634 Vaccinium macrocarpon HOM05D001251 ORTHO05D004135 7.7e-101 371.7 481 53.0
COL.COLO4_23060 Corchorus olitorius HOM05D001251 ORTHO05D004135 1.0e-100 371.3 437 56.3
Gorai.007G113900 Gossypium raimondii HOM05D001251 ORTHO05D004135 1.7e-100 370.5 477 52.4
CiPaw.01G085700 Carya illinoinensis HOM05D001251 ORTHO05D004135 8.5e-100 368.2 485 53.0
Nn1g00457 Nelumbo nucifera HOM05D001251 ORTHO05D004135 3.2e-99 366.3 475 52.8
Sabra14G0079000 Salix brachista HOM05D001251 ORTHO05D004135 4.7e-98 362.5 476 51.7
Sabra02G0133600 Salix brachista HOM05D001251 ORTHO05D004135 2.2e-95 353.6 478 50.8
MSTRG.4794 Avicennia marina HOM05D001251 ORTHO05D004135 4.8e-95 352.4 488 49.8
Cc02_g39990 Coffea canephora HOM05D001251 ORTHO05D004135 4.8e-95 352.4 478 51.0
Glyma.16G017400 Glycine max HOM05D001251 ORTHO05D004135 2.0e-93 347.1 479 50.9
TAR629G3201 Trochodendron aralioides HOM05D001251 ORTHO05D004135 2.0e-93 347.1 470 49.6
Actinidia01529 Actinidia chinensis HOM05D001251 ORTHO05D004135 2.6e-93 346.7 436 54.8
Peaxi162Scf00092g01519 Petunia axillaris HOM05D001251 ORTHO05D004135 1.0e-92 344.7 504 48.8
Sopen10g001100 Solanum pennellii HOM05D001251 ORTHO05D004135 1.0e-92 344.7 474 49.4
MD01G1090900 Malus domestica HOM05D001251 ORTHO05D004135 2.9e-92 343.2 494 49.0
Solyc10g005080.3 Solanum lycopersicum HOM05D001251 ORTHO05D004135 1.5e-91 340.9 474 48.9
TWI23G1207 Tripterygium wilfordii HOM05D001251 ORTHO05D004135 2.5e-91 340.1 484 49.0
Migut.N01518 Erythranthe guttata HOM05D001251 ORTHO05D004135 1.2e-90 337.8 479 49.7
FAN01G1785 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.6e-90 337.4 469 51.4
CiPaw.02G045300 Carya illinoinensis HOM05D001251 ORTHO05D004135 3.6e-90 336.3 496 50.0
Eucgr.D02651 Eucalyptus grandis HOM05D001251 ORTHO05D004135 3.6e-90 336.3 473 49.7
Oeu034954.1 Olea europaea HOM05D001251 ORTHO05D004135 6.1e-90 335.5 479 47.0
Oeu064410.3 Olea europaea HOM05D001251 ORTHO05D004135 6.1e-90 335.5 484 48.6
Medtr7g118330 Medicago truncatula HOM05D001251 ORTHO05D004135 1.4e-89 334.3 478 49.8
Glyma.07G048500 Glycine max HOM05D001251 ORTHO05D004135 3.9e-89 332.8 480 48.8
CAN.G1150.2 Capsicum annuum HOM05D001251 ORTHO05D004135 1.1e-88 331.3 474 47.7
Manes.01G239000 Manihot esculenta HOM05D001251 ORTHO05D004135 1.1e-88 331.3 460 49.1
RcHm_v2.0_Chr1g0361301 Rosa chinensis HOM05D001251 ORTHO05D004135 4.4e-88 329.3 491 49.9
CSS0039199 Camellia sinensis var. sinensis HOM05D001251 ORTHO05D004135 7.4e-88 328.6 418 55.5
FAN01G0834 Fragaria x ananassa HOM05D001251 ORTHO05D004135 2.8e-87 326.6 483 49.1
FAN06G3608 Fragaria x ananassa HOM05D001251 ORTHO05D004135 2.8e-87 326.6 492 48.8
arahy.Tifrunner.gnm1.ann1.0U0SSW Arachis hypogaea HOM05D001251 ORTHO05D004135 4.8e-87 325.9 490 48.2
Ca_09556_v3 Cicer arietinum L. HOM05D001251 ORTHO05D004135 4.8e-87 325.9 480 49.0
FvH4_7g17850 Fragaria vesca HOM05D001251 ORTHO05D004135 8.2e-87 325.1 485 49.1
Gohir.D12G121000 Gossypium hirsutum HOM05D001251 ORTHO05D004135 1.4e-86 324.3 477 48.6
Manes.05G015600 Manihot esculenta HOM05D001251 ORTHO05D004135 1.8e-86 323.9 469 48.4
FAN03G0514 Fragaria x ananassa HOM05D001251 ORTHO05D004135 2.4e-86 323.6 488 49.0
arahy.Tifrunner.gnm1.ann1.J7VJ5I Arachis hypogaea HOM05D001251 ORTHO05D004135 5.3e-86 322.4 490 47.6
FAN06G1969 Fragaria x ananassa HOM05D001251 ORTHO05D004135 9.1e-86 321.6 482 48.8
SalBow5G5002 Salvia bowleyana HOM05D001251 ORTHO05D004135 7.7e-85 318.5 490 48.0
VMungo0331G1277 Vigna mungo HOM05D001251 ORTHO05D004135 1.3e-84 317.8 478 47.7
Glyma.03G261800 Glycine max HOM05D001251 ORTHO05D004135 1.7e-84 317.4 478 49.0
TPR.G4678 Trifolium pratense HOM05D001251 ORTHO05D004135 6.5e-84 315.5 481 46.6
Gohir.A12G117400 Gossypium hirsutum HOM05D001251 ORTHO05D004135 1.1e-83 314.7 477 48.0
Glyma.19G260900 Glycine max HOM05D001251 ORTHO05D004135 1.9e-83 313.9 478 48.5
FAN10G0258 Fragaria x ananassa HOM05D001251 ORTHO05D004135 7.2e-83 312.0 483 48.9
Hund16759 Selenicereus undatus HOM05D001251 ORTHO05D004135 2.7e-82 310.1 476 46.4
FAN10G4260 Fragaria x ananassa HOM05D001251 ORTHO05D004135 4.0e-81 306.2 488 48.2
Lalb_Chr10g0100921 Lupinus albus HOM05D001251 ORTHO05D004135 3.7e-79 299.7 484 46.9
AUR62004570 Chenopodium quinoa HOM05D001251 ORTHO05D004135 6.3e-79 298.9 480 45.4
AUR62022683 Chenopodium quinoa HOM05D001251 ORTHO05D004135 1.4e-78 297.7 479 45.3
Phvul.010G120401 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 9.1e-78 295.0 462 47.8
DCAR_006991 Daucus carota HOM05D001251 ORTHO05D004135 1.2e-77 294.7 441 47.8
VMungo1309G2431 Vigna mungo HOM05D001251 ORTHO05D004135 4.5e-77 292.7 446 47.1
Lj9C609G5 Lonicera japonica HOM05D001251 ORTHO05D004135 5.9e-77 292.4 482 49.8
Sc26g0000440 Simmondsia chinensis HOM05D001251 ORTHO05D004135 1.0e-76 291.6 468 45.1
Psat3g000720 Pisum sativum HOM05D001251 ORTHO05D004135 2.2e-76 290.4 476 47.3
arahy.Tifrunner.gnm1.ann1.P5534Y Arachis hypogaea HOM05D001251 ORTHO05D004135 6.5e-76 288.9 478 46.0
arahy.Tifrunner.gnm1.ann1.GF54Z4 Arachis hypogaea HOM05D001251 ORTHO05D004135 1.1e-75 288.1 478 46.0
Lj3g0020484 Lotus japonicus HOM05D001251 ORTHO05D004135 1.1e-75 288.1 480 45.2
Phvul.009G259400 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 2.1e-74 283.9 472 45.3
EL10Ac1g00171 Beta vulgaris HOM05D001251 ORTHO05D004135 1.5e-72 277.7 477 42.8
PGR031G0915 Punica granatum HOM05D001251 ORTHO05D004135 2.0e-72 277.3 475 43.4
Phvul.009G259650 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 1.3e-71 274.6 473 44.6
MBI12_g27877_MAGBIO Magnolia biondii HOM05D001251 ORTHO05D004135 1.4e-70 271.2 476 45.0
Nitab4.5_0007792g0010 Nicotiana tabacum HOM05D001251 ORTHO05D004135 2.0e-69 267.3 470 41.5
MELO3C022302.2 Cucumis melo HOM05D001251 ORTHO05D004135 1.7e-68 264.2 484 43.0
MBI04_g18999_MAGBIO Magnolia biondii HOM05D001251 ORTHO05D004135 5.5e-67 259.2 481 43.7
Lalb_Chr18g0044761 Lupinus albus HOM05D001251 ORTHO05D004135 7.2e-67 258.8 481 41.4
Actinidia28507 Actinidia chinensis HOM05D001251 ORTHO05D004135 1.8e-65 254.2 275 57.5
ClCG06G002330 Citrullus lanatus HOM05D001251 ORTHO05D004135 1.5e-64 251.1 486 41.2
Ah.05g178860 Amaranthus hybridus HOM05D001251 ORTHO05D004135 2.9e-63 246.9 479 39.9
Lalb_Chr15g0076591 Lupinus albus HOM05D001251 ORTHO05D004135 1.1e-62 245.0 483 40.8
SGA_v2.0_scaffold232G43523 Striga asiatica HOM05D001251 ORTHO05D004135 1.6e-61 241.1 484 41.7
CsaV3_6G008360 Cucumis sativus L. HOM05D001251 ORTHO05D004135 2.9e-60 236.9 481 39.5
unitig_45.g31541 Utricularia gibba HOM05D001251 ORTHO05D004135 1.5e-59 234.6 484 39.9
Aa31LG1G10420 Aethionema arabicum HOM05D001251 ORTHO05D004135 2.5e-59 233.8 476 41.0
ECA240G1436 Erigeron canadensis HOM05D001251 ORTHO05D004135 2.3e-57 227.3 480 40.6
Sed0026128 Sechium edule HOM05D001251 ORTHO05D004135 2.6e-56 223.8 470 39.4
PSO782G0772 Papaver somniferum HOM05D001251 ORTHO05D004135 2.4e-54 217.2 508 39.6
THA.LOC104825910 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 2.0e-53 214.2 468 39.7
THA.LOC104803067 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 4.6e-53 213.0 462 39.4
PSO063G2933 Papaver somniferum HOM05D001251 ORTHO05D004135 1.3e-52 211.5 506 40.1
Sed0027265 Sechium edule HOM05D001251 ORTHO05D004135 2.5e-51 207.2 484 37.6
Carub.0001s0116 Capsella rubella HOM05D001251 ORTHO05D004135 1.2e-50 204.9 473 39.3
AT1G01060 Arabidopsis thaliana HOM05D001251 ORTHO05D004135 4.7e-50 203.0 471 39.7
HanXRQChr15g0489581 Helianthus annuus HOM05D001251 ORTHO05D004135 4.7e-50 203.0 451 41.9
THA.LOC104815900 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 3.4e-48 196.8 480 37.7
Aqoxy7G00001_Aqoxy7G00002 Aquilegia oxysepala HOM05D001251 ORTHO05D004135 2.2e-47 194.1 436 38.5
unitig_8.g3406 Utricularia gibba HOM05D001251 ORTHO05D004135 3.7e-47 193.4 472 37.7
Thhalv10007028m.g Eutrema salsugineum HOM05D001251 ORTHO05D004135 8.3e-47 192.2 457 39.6
HanXRQChr09g0264401 Helianthus annuus HOM05D001251 ORTHO05D004135 1.1e-46 191.8 474 38.8
CARHR001420 Cardamine hirsuta HOM05D001251 ORTHO05D004135 2.4e-46 190.7 441 40.1
HanXRQChr09g0264411 Helianthus annuus HOM05D001251 ORTHO05D004135 5.4e-46 189.5 465 37.6
THA.LOC104827645 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 9.2e-46 188.7 460 40.0
AL1G11460 Arabidopsis lyrata HOM05D001251 ORTHO05D004135 1.2e-45 188.3 461 39.5
Hund27142 Selenicereus undatus HOM05D001251 ORTHO05D004135 1.6e-45 188.0 333 41.7
Sp1g01250 Schrenkiella parvula HOM05D001251 ORTHO05D004135 1.0e-44 185.3 409 40.1
C03p00110 Brassica napus HOM05D001251 ORTHO05D004135 1.6e-42 177.9 459 37.7
unitig_8.g4997 Utricularia gibba HOM05D001251 ORTHO05D004135 6.2e-42 176.0 481 38.5
BraA08t35670Z Brassica rapa HOM05D001251 ORTHO05D004135 1.1e-41 175.3 408 39.2
Os08g0157600 Oryza sativa ssp. japonica HOM05D001251 ORTHO05D004135 1.5e-40 171.4 476 36.1
ATR0661G164 Amborella trichopoda HOM05D001251 ORTHO05D004135 2.6e-40 170.6 499 33.9
BraA10t42363Z Brassica rapa HOM05D001251 ORTHO05D004135 4.4e-40 169.9 477 37.1
BcaB03g13553 Brassica carinata HOM05D001071 ORTHO05D004135 7.6e-40 169.1 445 37.1
BcaB01g06139 Brassica carinata HOM05D001251 ORTHO05D004135 1.3e-39 168.3 456 36.4
BolC3t12576H Brassica oleracea HOM05D001251 ORTHO05D004135 1.3e-39 168.3 456 36.4
unitig_22.g6823 Utricularia gibba HOM05D001251 ORTHO05D004135 3.7e-39 166.8 477 37.5
BolC5t28872H Brassica oleracea HOM05D001251 ORTHO05D004135 6.4e-39 166.0 471 36.5
A10p00850 Brassica napus HOM05D001251 ORTHO05D004135 8.4e-39 165.6 477 36.7
C05p00880 Brassica napus HOM05D001251 ORTHO05D004135 2.4e-38 164.1 472 36.9
CDE04G0747 Ceratophyllum demersum HOM05D001251 ORTHO05D004135 2.4e-38 164.1 463 34.6
A08p37730 Brassica napus HOM05D001251 ORTHO05D004135 1.2e-37 161.8 380 38.7
Zm00001eb172450 Zea mays HOM05D001251 ORTHO05D004135 3.5e-37 160.2 451 33.9
unitig_578.g16510 Utricularia gibba HOM05D001251 ORTHO05D004135 1.7e-36 157.9 336 39.6
Aa31LG1G28200 Aethionema arabicum HOM05D001251 ORTHO05D004135 1.1e-35 155.2 395 37.2
TAR375G0588 Trochodendron aralioides HOM05D000031 ORTHO05D009544 2.1e-34 151.0 229 45.0
BolC7t40758H Brassica oleracea HOM05D001251 ORTHO05D004135 1.8e-33 147.9 443 36.3
Lsat_1_v5_gn_3_140720 Lactuca sativa HOM05D001251 ORTHO05D004135 2.0e-32 144.4 498 33.9
Prupe.2G200300 Prunus persica HOM05D001251 ORTHO05D004135 1.7e-31 141.4 197 50.3
Oeu032681.1 Olea europaea HOM05D001251 ORTHO05D004135 2.9e-31 140.6 129 56.6
Carub.0004s2954 Capsella rubella HOM05D001251 ORTHO05D004135 2.3e-28 131.0 399 33.8
AT2G46830 Arabidopsis thaliana HOM05D001251 ORTHO05D004135 5.1e-28 129.8 387 35.4
CARHR142180 Cardamine hirsuta HOM05D001251 ORTHO05D004135 6.6e-28 129.4 384 37.8
Zm00001eb415760 Zea mays HOM05D001251 ORTHO05D004135 1.5e-27 128.3 217 46.1
AL4G46300 Arabidopsis lyrata HOM05D001251 ORTHO05D004135 9.6e-27 125.6 379 35.6
BcaC06g36494 Brassica carinata HOM05D001251 ORTHO05D004135 1.3e-26 125.2 394 35.0
A05p00970 Brassica napus HOM05D001071 ORTHO05D004135 1.4e-25 121.7 456 32.2
BraA05t19097Z Brassica rapa HOM05D001071 ORTHO05D004135 5.3e-25 119.8 458 32.1
C04p01110 Brassica napus HOM05D001071 ORTHO05D004135 9.0e-25 119.0 443 33.6
Sp4g28860 Schrenkiella parvula HOM05D001251 ORTHO05D004135 3.4e-24 117.1 418 34.9
BolC4t21764H Brassica oleracea HOM05D001071 ORTHO05D004135 5.8e-24 116.3 447 33.3
HPP92_002735 Vanilla planifolia HOM05D001251 ORTHO05D004135 7.6e-24 115.9 402 34.8
Aqoxy7G03772 Aquilegia oxysepala HOM05D001251 ORTHO05D004135 5.4e-22 109.8 217 38.7
CDE12G0822 Ceratophyllum demersum HOM05D001251 ORTHO05D004135 2.7e-21 107.5 253 38.7
C07p03620 Brassica napus HOM05D001251 ORTHO05D004135 3.3e-19 100.5 414 31.6
VMungo1383G3693 Vigna mungo HOM05D001251 ORTHO05D004135 1.6e-18 98.2 95 57.9
Psat0s580g0080 Pisum sativum HOM05D001251 ORTHO05D004135 9.0e-17 92.4 178 38.8
FAN02G3085 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.2e-16 92.0 124 50.0
FAN03G1652 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.2e-16 92.0 124 50.0
FAN17G2333 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.5e-16 91.7 123 49.6
BcaC06g36496 Brassica carinata HOM05D001251 ORTHO05D004135 1.7e-15 88.2 264 38.3
FAN24G2965 Fragaria x ananassa HOM05D001251 ORTHO05D004135 4.9e-15 86.7 123 48.0
BcaC07g37015 Brassica carinata HOM05D001251 ORTHO05D004135 9.3e-14 82.4 227 38.8
C07p03630 Brassica napus HOM05D001251 ORTHO05D004135 1.6e-13 81.6 105 51.4
C08p00050 Brassica napus HOM05D001251 ORTHO05D004135 3.5e-13 80.5 105 50.5
BolC8t46805H Brassica oleracea HOM05D001251 ORTHO05D004135 3.5e-13 80.5 105 50.5
BcaC06g36495 Brassica carinata HOM05D001251 ORTHO05D004135 1.0e-12 79.0 105 50.5
C08p00060 Brassica napus HOM05D001251 ORTHO05D004135 6.7e-12 76.3 192 38.0
BcaC07g37009 Brassica carinata HOM05D001251 ORTHO05D004135 7.4e-11 72.8 108 47.2
SGA_v2.0_scaffold43G16339 Striga asiatica HOM05D000071 ORTHO05D000029 9.6e-11 72.4 65 63.1
Oeu053268.1 Olea europaea HOM05D001251 ORTHO05D004135 2.1e-10 71.2 79 58.2
FAN15G2528 Fragaria x ananassa HOM05D001251 ORTHO05D004135 6.2e-10 69.7 110 45.5
HPP92_020838 Vanilla planifolia HOM05D001251 ORTHO05D004135 5.3e-09 66.6 313 28.4
HPP92_020743 Vanilla planifolia HOM05D001251 ORTHO05D004135 3.4e-08 63.9 372 26.3
BcaC02g12627 Brassica carinata HOM05D001071 ORTHO05D000932 5.8e-08 63.2 143 37.8
Zm00001eb415770 Zea mays HOM05D001251 ORTHO05D004135 3.8e-07 60.5 98 38.8
HanXRQChr15g0489571 Helianthus annuus HOM05D001251 ORTHO05D004135 8.4e-07 59.3 370 30.0
SEGI_18839 Sequoiadendron giganteum HOM05D001251 ORTHO05D004135 1.1e-06 58.9 375 26.9
BcaC02g12626 Brassica carinata HOM05D001251 ORTHO05D004135 1.9e-06 58.2 279 30.8


User provided reference genes

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