Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv31933 Davidia involucrata HOM05D005066 ORTHO05D006138 9.6e-269 929.5 438 100.0
Hma1.2p1_0507F.1_g168410 Hydrangea macrophylla HOM05D005066 ORTHO05D006138 3.6e-191 671.8 350 89.4
CSS0029951 Camellia sinensis var. sinensis HOM05D005066 ORTHO05D006138 1.8e-190 669.5 339 92.3
Actinidia37971 Actinidia chinensis HOM05D005066 ORTHO05D006138 4.0e-190 668.3 339 93.2
Rhsim06G0007900 Rhododendron simsii HOM05D005066 ORTHO05D006138 5.2e-182 641.3 378 81.2
GSVIVG01008680001 Vitis vinifera HOM05D005066 ORTHO05D006138 9.9e-181 637.1 339 88.8
Manes.18G005800 Manihot esculenta HOM05D005066 ORTHO05D006138 3.2e-179 632.1 339 86.7
Oeu011330.2 Olea europaea HOM05D005066 ORTHO05D006138 3.2e-179 632.1 339 86.4
Cpa.g.sc26.207 Carica papaya HOM05D005066 ORTHO05D006138 1.6e-178 629.8 339 85.0
Prupe.1G355000 Prunus persica HOM05D005066 ORTHO05D006138 8.7e-177 624.0 339 85.3
vmacro21822 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 1.1e-176 623.6 368 82.1
Duzib093G2109 Durio zibethinus HOM05D005066 ORTHO05D006138 3.3e-176 622.1 339 84.1
Lj4C805G13 Lonicera japonica HOM05D005066 ORTHO05D006138 5.6e-176 621.3 353 83.3
Cc10_g00720 Coffea canephora HOM05D005066 ORTHO05D006138 7.3e-176 620.9 350 83.4
DCAR_013911 Daucus carota HOM05D005066 ORTHO05D006138 1.6e-175 619.8 338 85.8
Potri.005G249800 Populus trichocarpa HOM05D005066 ORTHO05D006138 3.6e-175 618.6 339 84.1
CiPaw.07G139500 Carya illinoinensis HOM05D005066 ORTHO05D006138 8.1e-175 617.5 339 84.1
Thecc.08G057800 Theobroma cacao HOM05D005066 ORTHO05D006138 1.4e-174 616.7 339 84.1
Eucgr.F03549 Eucalyptus grandis HOM05D005066 ORTHO05D006138 3.1e-174 615.5 339 81.7
Cfa014063 Carpinus fangiana HOM05D005066 ORTHO05D006138 1.2e-173 613.6 339 84.4
MD15G1002700 Malus domestica HOM05D005066 ORTHO05D006138 1.2e-173 613.6 339 84.4
AL1G33470 Arabidopsis lyrata HOM05D005066 ORTHO05D006138 1.5e-173 613.2 339 83.8
MSTRG.27774 Avicennia marina HOM05D005066 ORTHO05D006138 1.5e-173 613.2 339 81.1
AT1G20540 Arabidopsis thaliana HOM05D005066 ORTHO05D006138 2.0e-173 612.8 339 83.5
THA.LOC104813757 Tarenaya hassleriana HOM05D005066 ORTHO05D006138 4.4e-173 611.7 339 82.9
Gorai.009G267800 Gossypium raimondii HOM05D005066 ORTHO05D006138 9.9e-173 610.5 354 80.2
Gohir.A05G254700 Gossypium hirsutum HOM05D005066 ORTHO05D006138 1.3e-172 610.1 339 82.9
Nitab4.5_0000588g0150 Nicotiana tabacum HOM05D005066 ORTHO05D006138 1.7e-172 609.8 338 84.6
Peaxi162Scf00893g00433 Petunia axillaris HOM05D005066 ORTHO05D006138 6.4e-172 607.8 339 84.1
Thhalv10008062m.g Eutrema salsugineum HOM05D005066 ORTHO05D006138 8.4e-172 607.4 339 82.9
Ciclev10001617m.g Citrus clementina HOM05D005066 ORTHO05D006138 3.2e-171 605.5 348 81.3
Migut.C00955 Erythranthe guttata HOM05D005066 ORTHO05D006138 7.1e-171 604.4 350 80.3
Potri.002G011200 Populus trichocarpa HOM05D005066 ORTHO05D006138 9.3e-171 604.0 342 81.6
TWI36G1160 Tripterygium wilfordii HOM05D005066 ORTHO05D006138 2.7e-170 602.4 340 81.8
RcHm_v2.0_Chr6g0304181 Rosa chinensis HOM05D005066 ORTHO05D006138 1.3e-169 600.1 339 82.0
Carub.0001s2001 Capsella rubella HOM05D005066 ORTHO05D006138 3.0e-169 599.0 339 81.4
PGR031G0259 Punica granatum HOM05D005066 ORTHO05D006138 9.6e-168 594.0 339 79.4
MD08G1003000 Malus domestica HOM05D005066 ORTHO05D006138 1.3e-167 593.6 339 82.0
Lsat_1_v5_gn_2_6481 Lactuca sativa HOM05D005066 ORTHO05D006138 1.6e-167 593.2 350 79.7
A06p16540 Brassica napus HOM05D005066 ORTHO05D006138 2.8e-167 592.4 339 80.8
BraA06t24760Z Brassica rapa HOM05D005066 ORTHO05D006138 2.8e-167 592.4 339 80.8
FAN20G0881 Fragaria x ananassa HOM05D005066 ORTHO05D006138 3.6e-167 592.0 339 81.1
Sp1g18250 Schrenkiella parvula HOM05D005066 ORTHO05D006138 4.8e-167 591.7 339 80.2
BcaB07g32052 Brassica carinata HOM05D005066 ORTHO05D006138 1.1e-166 590.5 339 80.8
PGSC0003DMG400009976 Solanum tuberosum HOM05D005066 ORTHO05D006138 1.1e-166 590.5 339 81.4
MBI05_g05143_MAGBIO Magnolia biondii HOM05D005066 ORTHO05D006138 3.1e-166 589.0 339 80.8
FvH4_2g37550 Fragaria vesca HOM05D005066 ORTHO05D006138 5.3e-166 588.2 339 80.5
Aa31LG7G4800 Aethionema arabicum HOM05D005066 ORTHO05D006138 6.9e-166 587.8 339 81.7
FAN15G0307 Fragaria x ananassa HOM05D005066 ORTHO05D006138 6.9e-166 587.8 339 80.2
SGA_v2.0_scaffold108G30855 Striga asiatica HOM05D005066 ORTHO05D006138 6.9e-166 587.8 337 80.1
Lalb_Chr23g0265821 Lupinus albus HOM05D005066 ORTHO05D006138 2.6e-165 585.9 339 79.6
COL.COLO4_03999 Corchorus olitorius HOM05D005066 ORTHO05D006138 3.4e-165 585.5 319 84.3
CsaV3_6G031630 Cucumis sativus L. HOM05D005066 ORTHO05D006138 3.4e-165 585.5 340 81.2
Lj1g0027661 Lotus japonicus HOM05D005066 ORTHO05D006138 1.7e-164 583.2 339 79.9
Solyc04g082300.2 Solanum lycopersicum HOM05D005066 ORTHO05D006138 2.2e-164 582.8 339 80.5
Sopen04g035920 Solanum pennellii HOM05D005066 ORTHO05D006138 2.2e-164 582.8 339 80.5
HanXRQChr14g0428271 Helianthus annuus HOM05D005066 ORTHO05D006138 2.9e-164 582.4 339 80.8
PSO170G0128 Papaver somniferum HOM05D005066 ORTHO05D006138 3.8e-164 582.0 339 80.5
Ca_15439_v3 Cicer arietinum L. HOM05D005066 ORTHO05D006138 4.9e-164 581.6 339 79.1
PSO210G7270 Papaver somniferum HOM05D005066 ORTHO05D006138 8.4e-164 580.9 339 80.8
arahy.Tifrunner.gnm1.ann1.B8YF15 Arachis hypogaea HOM05D005066 ORTHO05D006138 4.2e-163 578.6 339 77.9
arahy.Tifrunner.gnm1.ann1.76XKSK Arachis hypogaea HOM05D005066 ORTHO05D006138 5.4e-163 578.2 338 78.1
CANSAT25G3513 Cannabis sativa HOM05D005066 ORTHO05D006138 9.3e-163 577.4 341 79.5
Thhalv10018792m.g Eutrema salsugineum HOM05D005066 ORTHO05D006138 1.2e-162 577.0 339 79.4
Sp5g31400 Schrenkiella parvula HOM05D005066 ORTHO05D006138 1.2e-162 577.0 339 79.1
VMungo1309G2329 Vigna mungo HOM05D005066 ORTHO05D006138 1.2e-162 577.0 339 78.5
ECA238G2025 Erigeron canadensis HOM05D005066 ORTHO05D006138 4.6e-162 575.1 339 79.6
BcaC08g47273 Brassica carinata HOM05D005066 ORTHO05D006138 1.0e-161 573.9 339 79.1
BolC6t40062H Brassica oleracea HOM05D005066 ORTHO05D006138 1.0e-161 573.9 339 79.1
FAN27G0843 Fragaria x ananassa HOM05D005066 ORTHO05D006138 3.0e-161 572.4 358 75.7
Aa31LG4G6350 Aethionema arabicum HOM05D005066 ORTHO05D006138 6.7e-161 571.2 339 78.2
Phvul.009G010100 Phaseolus vulgaris HOM05D005066 ORTHO05D006138 8.7e-161 570.9 339 77.3
Hund05118 Selenicereus undatus HOM05D005066 ORTHO05D006138 1.5e-160 570.1 338 81.1
TPR.G38213 Trifolium pratense HOM05D005066 ORTHO05D006138 1.5e-160 570.1 339 77.9
AL2G36340 Arabidopsis lyrata HOM05D005066 ORTHO05D006138 4.3e-160 568.5 339 78.8
Aqoxy5G01046 Aquilegia oxysepala HOM05D005066 ORTHO05D006138 9.6e-160 567.4 334 78.4
Carub.0002s2315 Capsella rubella HOM05D005066 ORTHO05D006138 1.3e-159 567.0 339 78.2
Glyma.06G018800 Glycine max HOM05D005066 ORTHO05D006138 8.1e-159 564.3 339 77.0
Nn6g31745 Nelumbo nucifera HOM05D005066 ORTHO05D006138 1.8e-158 563.1 326 80.1
SalBow7G4394 Salvia bowleyana HOM05D005066 ORTHO05D006138 1.5e-157 560.1 409 66.0
Medtr3g115200 Medicago truncatula HOM05D005066 ORTHO05D006138 2.0e-157 559.7 339 76.4
Sed0022458 Sechium edule HOM05D005066 ORTHO05D006138 2.9e-156 555.8 340 77.9
C06p50230 Brassica napus HOM05D005066 ORTHO05D006138 1.9e-155 553.1 339 77.0
CANSAT54G1628 Cannabis sativa HOM05D005066 ORTHO05D006138 2.5e-155 552.7 342 76.6
Sabra05G0193300 Salix brachista HOM05D005066 ORTHO05D006138 3.2e-155 552.4 383 70.0
AUR62043922 Chenopodium quinoa HOM05D005066 ORTHO05D006138 9.3e-155 550.8 339 78.5
BraA07t31713Z Brassica rapa HOM05D005066 ORTHO05D006138 2.7e-154 549.3 339 76.4
A07p41830 Brassica napus HOM05D005066 ORTHO05D006138 3.9e-153 545.4 339 76.1
AUR62036885 Chenopodium quinoa HOM05D005066 ORTHO05D006138 3.9e-153 545.4 339 77.3
AT1G76260 Arabidopsis thaliana HOM05D005066 ORTHO05D006138 6.7e-153 544.7 339 76.7
unitig_26.g9893 Utricularia gibba HOM05D005066 ORTHO05D006138 1.3e-151 540.4 339 72.0
Glyma.04G018500 Glycine max HOM05D005066 ORTHO05D006138 6.2e-151 538.1 319 78.1
CARHR069820 Cardamine hirsuta HOM05D005066 ORTHO05D006138 1.4e-150 537.0 339 75.2
Sc15g0004490 Simmondsia chinensis HOM05D005066 ORTHO05D006138 9.0e-150 534.3 319 78.1
Gohir.D05G256300 Gossypium hirsutum HOM05D005066 ORTHO05D006138 1.3e-148 530.4 293 82.6
ATR0661G259 Amborella trichopoda HOM05D005066 ORTHO05D006138 2.5e-147 526.2 338 69.8
BcaC05g25960 Brassica carinata HOM05D005066 ORTHO05D006138 1.1e-144 517.3 294 81.0
C05p19110 Brassica napus HOM05D005066 ORTHO05D006138 2.5e-144 516.2 309 77.3
BolC5t30611H Brassica oleracea HOM05D005066 ORTHO05D006138 2.5e-144 516.2 309 77.3
BcaC08g47124 Brassica carinata HOM05D005066 ORTHO05D006138 8.5e-140 501.1 319 74.9
EL10Ac1g01978 Beta vulgaris HOM05D005066 ORTHO05D006138 3.2e-139 499.2 325 74.8
TAR381G1664 Trochodendron aralioides HOM05D005066 ORTHO05D006138 2.2e-135 486.5 323 72.4
Os08g0554000 Oryza sativa ssp. japonica HOM05D005066 ORTHO05D006138 8.2e-135 484.6 340 65.0
Ah.13g072510 Amaranthus hybridus HOM05D005066 ORTHO05D006138 1.8e-134 483.4 396 61.9
BNapus_Darmor_BZH_scaffold_170p00070 Brassica napus HOM05D005066 ORTHO05D006138 1.2e-133 480.7 303 74.9
Zm00001eb039840 Zea mays HOM05D005066 ORTHO05D006138 6.5e-132 474.9 340 64.7
Psat5g011560 Pisum sativum HOM05D005066 ORTHO05D006138 4.8e-127 458.8 269 77.3
CSS0013002 Camellia sinensis var. sinensis HOM05D005066 ORTHO05D006138 1.2e-125 454.1 340 67.9
MELO3C026544.2 Cucumis melo HOM05D005066 ORTHO05D006138 1.5e-125 453.8 255 82.4
Zm00001eb180420 Zea mays HOM05D005066 ORTHO05D006138 3.5e-125 452.6 340 61.5
QL02p013964 Quercus lobata HOM05D005066 ORTHO05D006138 1.7e-116 423.7 259 77.6
Haze_22764 Corylus avellana HOM05D005066 ORTHO05D006138 2.0e-109 400.2 223 85.2
AUR62043921 Chenopodium quinoa HOM05D005066 ORTHO05D006138 4.0e-105 386.0 201 89.6
Actinidia29788 Actinidia chinensis HOM05D005066 ORTHO05D006138 3.0e-97 359.8 211 81.5
Atru.chr13.151 Acer truncatum HOM05D005066 ORTHO05D006138 2.3e-92 343.6 180 87.2
Mapoly0054s0060 Marchantia polymorpha HOM05D005066 ORTHO05D006138 7.0e-86 322.0 346 44.2
AagrBONN_evm.TU.Sc2ySwM_362.948 Anthoceros agrestis HOM05D005066 ORTHO05D006138 1.6e-85 320.9 344 43.9
CARHR021010 Cardamine hirsuta HOM05D005066 ORTHO05D006138 8.6e-84 315.1 192 75.5
HPP92_008373 Vanilla planifolia HOM05D005066 ORTHO05D006138 8.9e-81 305.1 219 64.8
ClCG08G009490 Citrullus lanatus HOM05D005066 ORTHO05D006138 6.0e-77 292.4 158 83.5
SMO118G0316 Selaginella moellendorffii HOM05D005066 ORTHO05D006138 1.1e-75 288.1 343 41.4
SHI08001 Sapria himalayana HOM05D005066 ORTHO05D006138 3.5e-69 266.5 199 65.8
AUR62043554 Chenopodium quinoa HOM05D005066 ORTHO05D006138 1.9e-62 244.2 144 78.5
Cre02.g109400 Chlamydomonas reinhardtii HOM05D005066 ORTHO05D006138 1.7e-52 211.1 359 32.0
ClCG00G005440 Citrullus lanatus HOM05D005066 ORTHO05D006138 3.9e-52 209.9 126 77.0
CDE02G3878 Ceratophyllum demersum HOM05D005066 ORTHO05D006138 3.2e-46 190.3 108 80.6
ClCG08G009550 Citrullus lanatus HOM05D005066 ORTHO05D006138 4.2e-46 189.9 114 78.9
MBI05_g41554_MAGBIO Magnolia biondii HOM05D005066 ORTHO05D006138 2.1e-45 187.6 129 70.5
QL02p013958 Quercus lobata HOM05D005066 ORTHO05D006138 7.4e-43 179.1 87 95.4
Duzib116G0540 Durio zibethinus HOM05D005066 ORTHO05D006138 4.5e-40 169.9 118 67.8
PRCOL_00000380 Prasinoderma coloniale HOM05D005066 ORTHO05D006138 7.9e-29 132.5 299 28.1
Haze_22758 Corylus avellana HOM05D005066 ORTHO05D006138 2.3e-28 131.0 76 81.6
SEGI_37952 Sequoiadendron giganteum HOM05D005066 ORTHO05D006138 5.7e-27 126.3 82 65.9
vmacro11237 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 6.3e-26 122.9 69 81.2
CDE04G2988 Ceratophyllum demersum HOM05D005066 ORTHO05D006138 1.1e-25 122.1 72 72.2
vmacro11236 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 1.4e-25 121.7 96 63.5
CBR_g17938 Chara braunii HOM05D005066 ORTHO05D006138 6.7e-20 102.8 204 28.9
Actinidia07458 Actinidia chinensis HOM05D005066 ORTHO05D006138 1.4e-14 85.1 44 84.1
Actinidia09068 Actinidia chinensis HOM05D005066 ORTHO05D006138 1.9e-14 84.7 54 75.9
MCO04G183 Micromonas commoda HOM05D005066 ORTHO05D006138 1.9e-14 84.7 363 23.4
arahy.Tifrunner.gnm1.ann1.FBZU85 Arachis hypogaea HOM05D005066 ORTHO05D006138 7.2e-14 82.8 147 36.1
Peaxi162Scf00362g00643 Petunia axillaris HOM05D000347 ORTHO05D001997 1.0e-12 79.0 168 26.2
SEGI_07968 Sequoiadendron giganteum HOM05D005066 ORTHO05D006138 1.0e-12 79.0 46 76.1
arahy.Tifrunner.gnm1.ann1.7RQ6TB Arachis hypogaea HOM05D005066 ORTHO05D006138 1.8e-12 78.2 85 47.1
vmacro21824 Vaccinium macrocarpon HOM05D004614 ORTHO05D005339 3.9e-12 77.0 48 75.0
Glyma.12G033100 Glycine max HOM05D000347 ORTHO05D001997 7.4e-11 72.8 165 24.2
MD10G1124300 Malus domestica HOM05D000347 ORTHO05D001997 9.7e-11 72.4 168 22.0
AUR62038170 Chenopodium quinoa HOM05D000030 ORTHO05D000031 2.2e-10 71.2 42 71.4
Ah.01g008430 Amaranthus hybridus HOM05D000347 ORTHO05D001997 1.8e-09 68.2 169 25.4
AUR62018933 Chenopodium quinoa HOM05D000030 ORTHO05D000031 1.8e-09 68.2 42 69.0
SGA_v2.0_scaffold275G46594 Striga asiatica HOM05D005066 ORTHO05D406259 1.8e-09 68.2 168 34.5
Nitab4.5_0000283g0360 Nicotiana tabacum HOM05D000347 ORTHO05D001997 1.6e-08 65.1 147 24.5
Solyc01g111590.4 Solanum lycopersicum HOM05D000347 ORTHO05D001997 1.6e-08 65.1 143 25.2
Cre02.g109150 Chlamydomonas reinhardtii HOM05D005066 ORTHO05D006138 2.0e-08 64.7 57 43.9
Glyma.11G091500 Glycine max HOM05D000347 ORTHO05D001997 2.0e-08 64.7 143 25.2
Nn4g22810 Nelumbo nucifera HOM05D005066 ORTHO05D006138 2.0e-08 64.7 41 65.9
Nitab4.5_0003914g0030 Nicotiana tabacum HOM05D000347 ORTHO05D001997 2.0e-08 64.7 147 24.5
DCAR_013994 Daucus carota HOM05D000347 ORTHO05D001997 4.5e-08 63.5 301 20.3
Lj9A393T56 Lonicera japonica HOM05D000347 ORTHO05D001997 5.9e-08 63.2 218 19.3
Migut.B00081 Erythranthe guttata HOM05D000347 ORTHO05D001997 7.7e-08 62.8 145 25.5
Sopen01g053630 Solanum pennellii HOM05D000347 ORTHO05D001997 7.7e-08 62.8 142 26.1
PGSC0003DMG400006171 Solanum tuberosum HOM05D000347 ORTHO05D001997 1.3e-07 62.0 143 26.6
vmacro21823 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 3.8e-07 60.5 31 80.6
Rhsim11G0131900 Rhododendron simsii HOM05D000347 ORTHO05D001997 6.5e-07 59.7 300 22.7
CAN.G588.81 Capsicum annuum HOM05D000347 ORTHO05D001997 8.5e-07 59.3 151 23.8
SEGI_12583 Sequoiadendron giganteum HOM05D005066 ORTHO05D006138 1.5e-06 58.5 46 56.5
TWI79G0818 Tripterygium wilfordii HOM05D000347 ORTHO05D001997 1.5e-06 58.5 221 22.6
FvH4_2g01180 Fragaria vesca HOM05D000347 ORTHO05D001997 1.9e-06 58.2 147 23.1
FAN24G3508 Fragaria x ananassa HOM05D000347 ORTHO05D001997 1.9e-06 58.2 147 23.1
FAN15G3271 Fragaria x ananassa HOM05D000347 ORTHO05D001997 3.2e-06 57.4 147 23.1
FAN20G0646 Fragaria x ananassa HOM05D000347 ORTHO05D001997 3.2e-06 57.4 147 23.1
vmacro01787 Vaccinium macrocarpon HOM05D000347 ORTHO05D001997 3.2e-06 57.4 288 22.2
Oeu000196.1 Olea europaea HOM05D000347 ORTHO05D001997 5.5e-06 56.6 248 23.0
RcHm_v2.0_Chr1g0358871 Rosa chinensis HOM05D000684 ORTHO05D000688 9.4e-06 55.8 274 21.5


User provided reference genes

Program Settings