Gene: AT1G20540
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G20540
- Transcript Identifier AT1G20540.1
- Gene Type Coding gene
- Location Chr1 : 7112652-7115191 : positive
Gene Family Information
- ID HOM05D005066
- #Genes/#Species 148/98
- Phylogenetic origin
- ID ORTHO05D006138
- #Genes/#Species 147/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G20540.1
- uniprot Q8RWD8
Descriptions
- Description Transducin/WD40 repeat-like superfamily protein
- Computational description Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: DWD (DDB1-binding WD40 protein) hypersensitive to ABA 2 (TAIR:AT1G76260.1); Has 8926 Blast hits to 7393 proteins in 418 species: Archae - 0; Bacteria - 876; Metazoa - 3687; Fungi - 2097; Plants - 1353; Viruses - 0; Other Eukaryotes - 913 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016567 | IBA | Gene Ontology | protein ubiquitination | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0080008 | ISS | Gene Ontology | Cul4-RING E3 ubiquitin ligase complex | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |