Gene: Sopen01g053630

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g053630
  • Transcript Identifier Sopen01g053630.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 108647716-108650368 : negative

Gene Family Information

  • ID HOM05D000347
  • #Genes/#Species 1366/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g053630.1

Descriptions

  • Description Encodes a WD-40 repeat protein similar to yeast MSI1. | MULTICOPY SUPPRESSOR OF IRA1 2 (MSI2) | CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 , WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G16780
GO:0080008
ISO
PLAZA Integrative OrthologyCul4-RING E3 ubiquitin ligase complex AT4G35050

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022052 Histone-binding protein RBBP4, N-terminal
IPR001680 WD40 repeat
IPR020472 G-protein beta WD-40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
12.2.1.3 Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex.component CAF1c/MSI
12.4.2.2.2 Chromatin organisation.nucleosome remodeling.ISWI chromatin remodeling complexes.ISWI-CDM complex.component MSI3