Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 2.0e-189 665.6 338 100.0
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 2.4e-142 509.2 336 74.1
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 1.0e-137 493.8 339 73.5
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 1.1e-134 483.8 336 71.7
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 2.4e-134 482.6 351 72.9
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 1.6e-133 479.9 333 72.7
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 2.5e-131 472.6 335 71.3
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 4.2e-131 471.9 359 68.8
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 3.7e-127 458.8 334 67.7
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 1.3e-124 450.3 334 67.1
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 1.6e-122 443.4 333 68.2
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 8.0e-122 441.0 337 66.2
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 1.5e-120 436.8 327 67.0
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 1.5e-120 436.8 339 67.0
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 9.8e-120 434.1 338 66.0
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 3.7e-119 432.2 323 69.7
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 3.7e-119 432.2 338 67.5
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 3.0e-116 422.5 338 64.5
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 5.6e-115 418.3 384 57.6
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 9.5e-115 417.5 339 64.3
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 4.7e-114 415.2 336 64.6
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 3.1e-113 412.5 336 63.4
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 6.8e-113 411.4 336 63.4
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 6.8e-113 411.4 337 63.8
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 1.2e-112 410.6 338 60.4
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 3.4e-112 409.1 337 63.8
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 4.4e-112 408.7 334 64.1
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 5.8e-112 408.3 338 62.7
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 1.3e-111 407.1 332 62.7
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 2.2e-111 406.4 337 62.6
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 3.7e-111 405.6 338 62.4
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 3.7e-111 405.6 338 60.7
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 1.9e-110 403.3 332 64.5
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 2.4e-110 402.9 336 62.8
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 3.2e-110 402.5 338 60.9
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 4.1e-110 402.1 339 63.7
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 5.4e-110 401.7 337 61.1
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 5.4e-110 401.7 336 62.8
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 9.2e-110 401.0 338 59.8
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 1.2e-109 400.6 344 61.3
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 1.6e-109 400.2 352 61.4
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 6.0e-109 398.3 336 61.3
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 6.0e-109 398.3 281 73.0
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 7.8e-109 397.9 338 60.9
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 2.5e-107 392.9 329 60.2
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 9.5e-107 391.0 332 60.8
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 2.1e-106 389.8 346 60.7
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 6.2e-106 388.3 334 59.3
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 6.2e-106 388.3 318 63.5
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 1.8e-105 386.7 335 62.1
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 1.5e-104 383.6 362 59.1
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 1.2e-101 374.0 367 57.8
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 6.0e-101 371.7 333 61.0
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 1.0e-100 370.9 353 56.9
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.0e-100 369.4 333 59.8
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 5.1e-100 368.6 333 59.5
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 5.1e-100 368.6 333 59.5
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 5.1e-100 368.6 335 59.1
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 2.5e-99 366.3 341 57.5
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 4.3e-99 365.5 349 55.9
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.2e-98 364.0 334 59.6
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 1.4e-97 360.5 328 57.3
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 3.8e-95 352.4 328 56.4
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 4.9e-95 352.1 320 57.2
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 8.4e-95 351.3 309 59.5
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 1.7e-92 343.6 335 53.1
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 5.1e-92 342.0 343 56.0
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 5.1e-92 342.0 335 53.1
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 1.5e-91 340.5 332 55.1
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 5.6e-91 338.6 334 56.9
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 7.3e-91 338.2 337 53.4
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 1.6e-90 337.0 323 56.0
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 1.1e-89 334.3 338 53.6
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 7.6e-88 328.2 343 52.2
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 1.1e-86 324.3 355 51.8
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 5.4e-86 322.0 355 51.5
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 1.6e-85 320.5 296 59.5
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 1.0e-84 317.8 205 73.7
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 2.3e-84 316.6 296 58.8
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 1.8e-81 307.0 277 55.6
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 3.1e-81 306.2 339 51.6
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 1.2e-80 304.3 357 50.1
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 3.4e-80 302.8 263 59.7
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 4.5e-80 302.4 344 50.3
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 2.1e-77 293.5 332 51.2
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 2.3e-76 290.0 282 56.0
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 2.1e-74 283.5 334 49.4
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 2.8e-74 283.1 217 64.5
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 8.1e-74 281.6 337 49.6
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 4.0e-73 279.3 334 47.9
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 4.5e-72 275.8 334 48.2
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 4.5e-72 275.8 334 48.2
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 5.8e-72 275.4 330 48.2
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 1.3e-71 274.2 274 52.2
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 2.9e-71 273.1 334 47.3
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 4.9e-71 272.3 333 46.5
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 1.1e-70 271.2 334 47.3
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 7.1e-70 268.5 209 66.5
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 3.5e-69 266.2 237 57.8
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 7.9e-69 265.0 334 47.3
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 1.1e-67 261.2 271 51.3
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 2.8e-66 256.5 359 44.0
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 2.8e-66 256.5 351 45.3
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 4.8e-66 255.8 301 47.5
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 5.3e-65 252.3 241 54.8
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 5.8e-64 248.8 276 51.1
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 2.3e-60 236.9 208 60.1
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 1.3e-55 221.1 199 60.8
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 8.7e-52 208.4 201 51.7
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.2e-50 203.8 234 48.7
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 2.8e-50 203.4 209 50.7
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 2.6e-48 196.8 233 47.2
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 2.6e-48 196.8 204 50.5
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 9.4e-46 188.3 150 60.7
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 6.1e-45 185.7 233 46.4
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.3e-44 183.7 233 45.5
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 5.1e-44 182.6 261 39.5
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 4.5e-40 169.5 143 61.5
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 2.9e-39 166.8 136 61.0
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 1.9e-38 164.1 198 38.4
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 2.0e-35 154.1 126 57.1
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 3.7e-26 123.2 87 74.7
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 3.7e-26 123.2 184 40.2
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 8.8e-20 102.1 80 66.2
PRCOL_00002449 Prasinoderma coloniale HOM05D005236 ORTHO05D006557 8.6e-15 85.5 201 30.8
Cre01.g021850 Chlamydomonas reinhardtii HOM05D005236 ORTHO05D006557 9.5e-14 82.0 167 35.3
SEGI_25648 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 2.3e-07 60.8 70 47.1


User provided reference genes

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