Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28583 Davidia involucrata HOM05D002696 ORTHO05D019089 7.0e-145 517.3 267 100.0
Dinv06564 Davidia involucrata HOM05D002696 ORTHO05D003940 7.9e-64 248.1 170 79.4
Atru.chr8.1045 Acer truncatum HOM05D002696 ORTHO05D003940 1.6e-61 240.4 238 60.5
Rhsim03G0166400 Rhododendron simsii HOM05D002696 ORTHO05D003940 2.4e-60 236.5 171 75.4
CSS0021515 Camellia sinensis var. sinensis HOM05D002696 ORTHO05D003940 3.1e-60 236.1 169 76.3
Cfa008155 Carpinus fangiana HOM05D002696 ORTHO05D003940 3.1e-60 236.1 170 77.1
CSS0019414 Camellia sinensis var. sinensis HOM05D002696 ORTHO05D003940 1.5e-59 233.8 169 75.7
CSS0022672 Camellia sinensis var. sinensis HOM05D002696 ORTHO05D003940 2.6e-59 233.0 170 75.9
Haze_13890 Corylus avellana HOM05D002696 ORTHO05D003940 3.8e-58 229.2 256 55.9
MD01G1182300 Malus domestica HOM05D002696 ORTHO05D003940 3.8e-58 229.2 170 74.7
Ciclev10004183m.g Citrus clementina HOM05D002696 ORTHO05D003940 4.9e-58 228.8 170 75.3
Lj1A979T80 Lonicera japonica HOM05D002696 ORTHO05D003940 4.9e-58 228.8 170 73.5
Potri.003G108400 Populus trichocarpa HOM05D002696 ORTHO05D003940 1.9e-57 226.9 170 72.4
CiPaw.04G059400 Carya illinoinensis HOM05D002696 ORTHO05D003940 5.5e-57 225.3 170 73.5
GSVIVG01018715001 Vitis vinifera HOM05D002696 ORTHO05D003940 5.5e-57 225.3 170 72.9
Nitab4.5_0002816g0060 Nicotiana tabacum HOM05D002696 ORTHO05D003940 7.1e-57 224.9 158 76.6
CANSAT56G0989 Cannabis sativa HOM05D002696 ORTHO05D003940 1.2e-56 224.2 170 71.8
MD07G1252800 Malus domestica HOM05D002696 ORTHO05D003940 1.6e-56 223.8 170 71.8
TAR633G1694 Trochodendron aralioides HOM05D002696 ORTHO05D003940 2.7e-56 223.0 170 74.1
QL09p005648 Quercus lobata HOM05D002696 ORTHO05D003940 1.0e-55 221.1 170 72.9
Ca_23897_v3 Cicer arietinum L. HOM05D002696 ORTHO05D003940 1.3e-55 220.7 161 76.4
Prupe.2G276400 Prunus persica HOM05D002696 ORTHO05D003940 1.8e-55 220.3 170 71.2
Nitab4.5_0003490g0070 Nicotiana tabacum HOM05D002696 ORTHO05D003940 3.0e-55 219.5 170 71.8
QL09p005526 Quercus lobata HOM05D002696 ORTHO05D003940 3.9e-55 219.2 170 72.4
Sopen03g024050 Solanum pennellii HOM05D002696 ORTHO05D003940 5.1e-55 218.8 170 70.6
Atru.chr1.739 Acer truncatum HOM05D002696 ORTHO05D003940 8.7e-55 218.0 170 70.0
Lj3g0024722 Lotus japonicus HOM05D002696 ORTHO05D003940 8.7e-55 218.0 171 72.5
FvH4_7g27601 Fragaria vesca HOM05D002696 ORTHO05D019089 1.1e-54 217.6 170 71.8
Oeu022477.1 Olea europaea HOM05D002696 ORTHO05D003940 1.1e-54 217.6 172 70.3
CAN.G48.39 Capsicum annuum HOM05D002696 ORTHO05D003940 1.5e-54 217.2 170 71.2
Solyc03g093260.3 Solanum lycopersicum HOM05D002696 ORTHO05D003940 1.9e-54 216.9 170 70.0
VMungo1127G1101 Vigna mungo HOM05D002696 ORTHO05D003940 3.3e-54 216.1 170 70.6
Thecc.03G154800 Theobroma cacao HOM05D002696 ORTHO05D003940 7.4e-54 214.9 170 70.6
vmacro06809 Vaccinium macrocarpon HOM05D002696 ORTHO05D003940 9.6e-54 214.5 170 70.6
Phvul.011G211100 Phaseolus vulgaris HOM05D002696 ORTHO05D003940 1.3e-53 214.2 170 70.6
Eucgr.A02895 Eucalyptus grandis HOM05D002696 ORTHO05D003940 2.1e-53 213.4 170 69.4
Lalb_Chr03g0034121 Lupinus albus HOM05D002696 ORTHO05D003940 2.1e-53 213.4 165 72.1
Gohir.A03G059100 Gossypium hirsutum HOM05D002696 ORTHO05D003940 4.8e-53 212.2 170 69.4
arahy.Tifrunner.gnm1.ann1.BTDY3I Arachis hypogaea HOM05D002696 ORTHO05D003940 1.1e-52 211.1 170 69.4
Migut.F00482 Erythranthe guttata HOM05D002696 ORTHO05D003940 1.1e-52 211.1 170 68.2
SGA_v2.0_scaffold2G01216 Striga asiatica HOM05D002696 ORTHO05D003940 1.1e-52 211.1 166 70.5
Gohir.D03G107000 Gossypium hirsutum HOM05D002696 ORTHO05D003940 1.4e-52 210.7 170 68.8
Gorai.003G113400 Gossypium raimondii HOM05D002696 ORTHO05D003940 1.4e-52 210.7 170 68.8
HanXRQChr05g0144341 Helianthus annuus HOM05D002696 ORTHO05D003940 2.4e-52 209.9 169 68.6
PGR042G0896 Punica granatum HOM05D002696 ORTHO05D003940 2.4e-52 209.9 170 68.8
Cpa.g.sc3.331 Carica papaya HOM05D002696 ORTHO05D003940 3.1e-52 209.5 167 69.5
MBI15_g05590_MAGBIO Magnolia biondii HOM05D002696 ORTHO05D003940 4.1e-52 209.1 170 69.4
Nn4g25061 Nelumbo nucifera HOM05D002696 ORTHO05D003940 5.3e-52 208.8 170 67.6
FAN06G5126 Fragaria x ananassa HOM05D005186 ORTHO05D006278 4.5e-51 205.7 160 71.9
RcHm_v2.0_Chr1g0374201 Rosa chinensis HOM05D002696 ORTHO05D003940 7.6e-51 204.9 176 67.6
TPR.G1877 Trifolium pratense HOM05D002696 ORTHO05D003940 1.0e-50 204.5 152 75.0
DCAR_020185 Daucus carota HOM05D002696 ORTHO05D003940 5.0e-50 202.2 170 68.2
Medtr8g037325 Medicago truncatula HOM05D002696 ORTHO05D003940 8.4e-50 201.4 153 72.5
Aqoxy2G00559 Aquilegia oxysepala HOM05D002696 ORTHO05D003940 1.4e-49 200.7 170 63.5
arahy.Tifrunner.gnm1.ann1.P8M8R5 Arachis hypogaea HOM05D002696 ORTHO05D003940 1.9e-49 200.3 170 67.1
CARHR276190 Cardamine hirsuta HOM05D002696 ORTHO05D003940 3.2e-49 199.5 170 65.9
Manes.14G036500 Manihot esculenta HOM05D002696 ORTHO05D003940 4.2e-49 199.1 159 67.9
ECA234G3187 Erigeron canadensis HOM05D002696 ORTHO05D003940 5.5e-49 198.7 170 61.8
Carub.0008s2309 Capsella rubella HOM05D002696 ORTHO05D003940 9.3e-49 198.0 170 65.3
FvH4_7g27370 Fragaria vesca HOM05D002696 ORTHO05D003940 1.2e-48 197.6 176 64.8
TAR633G0051 Trochodendron aralioides HOM05D002696 ORTHO05D003940 1.6e-48 197.2 170 67.1
FAN01G1209 Fragaria x ananassa HOM05D002696 ORTHO05D003940 2.7e-48 196.4 176 64.8
FvH4_7g25682 Fragaria vesca HOM05D002696 ORTHO05D003940 4.6e-48 195.7 176 64.8
Glyma.13G202100 Glycine max HOM05D002696 ORTHO05D003940 4.6e-48 195.7 151 72.2
Lsat_1_v5_gn_8_8781 Lactuca sativa HOM05D002696 ORTHO05D003940 4.6e-48 195.7 153 70.6
Potri.001G125000 Populus trichocarpa HOM05D002696 ORTHO05D003940 4.6e-48 195.7 160 68.8
FAN06G1338 Fragaria x ananassa HOM05D002696 ORTHO05D003940 7.9e-48 194.9 177 63.3
CSS0036675 Camellia sinensis var. sinensis HOM05D002696 ORTHO05D003940 1.0e-47 194.5 152 76.3
AL8G39240 Arabidopsis lyrata HOM05D002696 ORTHO05D003940 1.8e-47 193.7 170 64.1
COL.COLO4_14108 Corchorus olitorius HOM05D002696 ORTHO05D003940 1.8e-47 193.7 159 68.6
FAN03G1522 Fragaria x ananassa HOM05D002696 ORTHO05D003940 1.8e-47 193.7 176 63.6
FAN06G3257 Fragaria x ananassa HOM05D002696 ORTHO05D003940 3.0e-47 193.0 176 64.2
BolC3t18703H Brassica oleracea HOM05D002696 ORTHO05D003940 3.9e-47 192.6 170 63.5
Glyma.12G236600 Glycine max HOM05D002696 ORTHO05D003940 8.7e-47 191.4 151 70.2
Sed0008600 Sechium edule HOM05D002696 ORTHO05D003940 8.7e-47 191.4 159 66.7
BcaB02g09643 Brassica carinata HOM05D002696 ORTHO05D003940 1.1e-46 191.0 170 62.9
PSO339G0313 Papaver somniferum HOM05D002696 ORTHO05D003940 4.3e-46 189.1 164 63.4
MELO3C006807.2 Cucumis melo HOM05D002696 ORTHO05D003940 7.4e-46 188.3 167 64.1
Peaxi162Scf00241g00034 Petunia axillaris HOM05D002696 ORTHO05D003940 7.4e-46 188.3 149 69.8
Sc10g0002620 Simmondsia chinensis HOM05D002696 ORTHO05D003940 7.4e-46 188.3 165 63.6
Sp2g25590 Schrenkiella parvula HOM05D002696 ORTHO05D003940 9.7e-46 188.0 170 63.5
PSO384G2493 Papaver somniferum HOM05D002696 ORTHO05D003940 1.3e-45 187.6 164 62.8
Duzib205G1343 Durio zibethinus HOM05D002696 ORTHO05D003940 1.6e-45 187.2 160 66.9
CDE12G0096 Ceratophyllum demersum HOM05D002696 ORTHO05D003940 2.2e-45 186.8 170 60.6
HanXRQChr08g0223041 Helianthus annuus HOM05D002696 ORTHO05D003940 3.7e-45 186.0 158 65.2
Psat4g148760 Pisum sativum HOM05D002696 ORTHO05D003940 6.3e-45 185.3 143 70.6
THA.LOC104818260 Tarenaya hassleriana HOM05D002696 ORTHO05D003940 6.3e-45 185.3 153 66.7
Duzib068G1251 Durio zibethinus HOM05D002696 ORTHO05D003940 8.2e-45 184.9 151 68.9
SalBow8G1580 Salvia bowleyana HOM05D002696 ORTHO05D003940 8.2e-45 184.9 170 60.0
Sabra01G0096100 Salix brachista HOM05D002696 ORTHO05D003940 1.1e-44 184.5 149 69.8
Ah.16g103870 Amaranthus hybridus HOM05D002696 ORTHO05D003940 2.4e-44 183.3 170 60.6
ClCG05G007340 Citrullus lanatus HOM05D002696 ORTHO05D003940 4.1e-44 182.6 200 55.0
FAN06G1128 Fragaria x ananassa HOM05D002696 ORTHO05D003940 4.1e-44 182.6 176 60.8
THA.LOC104821413 Tarenaya hassleriana HOM05D002696 ORTHO05D003940 6.9e-44 181.8 148 66.2
AUR62022940 Chenopodium quinoa HOM05D002696 ORTHO05D003940 2.6e-43 179.9 166 59.6
CsaV3_3G016100 Cucumis sativus L. HOM05D002696 ORTHO05D003940 3.4e-43 179.5 166 62.7
Hund13894 Selenicereus undatus HOM05D002696 ORTHO05D003940 5.9e-43 178.7 156 62.8
ATR0618G100 Amborella trichopoda HOM05D002696 ORTHO05D003940 1.0e-42 177.9 171 59.6
AUR62012301 Chenopodium quinoa HOM05D002696 ORTHO05D003940 1.0e-42 177.9 165 59.4
MSTRG.8828 Avicennia marina HOM05D002696 ORTHO05D003940 1.1e-41 174.5 146 64.4
BcaC01g02465 Brassica carinata HOM05D002696 ORTHO05D003940 1.1e-41 174.5 165 60.6
A06p29110 Brassica napus HOM05D002696 ORTHO05D003940 1.1e-41 174.5 165 60.6
C03p64490 Brassica napus HOM05D002696 ORTHO05D003940 1.1e-41 174.5 165 60.6
BraA06t25859Z Brassica rapa HOM05D002696 ORTHO05D003940 1.1e-41 174.5 165 60.6
FvH4_7g27644 Fragaria vesca HOM05D002696 ORTHO05D003940 1.4e-41 174.1 163 62.6
AT5G62410 Arabidopsis thaliana HOM05D002696 ORTHO05D003940 2.5e-41 173.3 151 63.6
PSO423G0248 Papaver somniferum HOM05D002696 ORTHO05D003940 2.5e-41 173.3 164 60.4
Zm00001eb144310 Zea mays HOM05D002696 ORTHO05D003940 2.7e-40 169.9 169 56.8
EL10Ac2g04892 Beta vulgaris HOM05D002696 ORTHO05D003940 4.6e-40 169.1 157 59.2
Aqoxy7G02846 Aquilegia oxysepala HOM05D002696 ORTHO05D003940 1.0e-39 167.9 159 57.9
Thhalv10003541m.g Eutrema salsugineum HOM05D002696 ORTHO05D003940 1.4e-39 167.5 150 62.7
FvH4_7g27350 Fragaria vesca HOM05D002696 ORTHO05D003940 3.0e-39 166.4 158 62.0
FAN06G0900 Fragaria x ananassa HOM05D002696 ORTHO05D003940 3.0e-39 166.4 156 61.5
BraA06t25103Z Brassica rapa HOM05D002696 ORTHO05D003940 8.8e-39 164.9 145 62.1
SGA_v2.0_scaffold44G16551 Striga asiatica HOM05D002696 ORTHO05D003940 8.8e-39 164.9 130 69.2
C03p71600 Brassica napus HOM05D002696 ORTHO05D003940 1.1e-38 164.5 145 62.8
Cc06_g23360 Coffea canephora HOM05D002696 ORTHO05D003940 1.1e-38 164.5 135 66.7
Os01g0904400 Oryza sativa ssp. japonica HOM05D002696 ORTHO05D003940 1.5e-38 164.1 151 60.3
A06p20190 Brassica napus HOM05D002696 ORTHO05D003940 4.3e-38 162.5 140 63.6
AT3G47460 Arabidopsis thaliana HOM05D002696 ORTHO05D003940 5.7e-38 162.2 170 54.7
CARHR156100 Cardamine hirsuta HOM05D002696 ORTHO05D003940 7.4e-38 161.8 145 60.7
Thhalv10010077m.g Eutrema salsugineum HOM05D002696 ORTHO05D003940 7.4e-38 161.8 140 62.9
Aa31LG4G16260 Aethionema arabicum HOM05D002696 ORTHO05D003940 9.7e-38 161.4 140 63.6
SEGI_01462 Sequoiadendron giganteum HOM05D002696 ORTHO05D003940 9.7e-38 161.4 170 54.7
BcaB01g00921 Brassica carinata HOM05D002696 ORTHO05D003940 1.7e-37 160.6 140 62.9
AL5G26680 Arabidopsis lyrata HOM05D002696 ORTHO05D003940 2.2e-37 160.2 139 61.9
BcaC01g01822 Brassica carinata HOM05D002696 ORTHO05D003940 2.8e-37 159.8 145 61.4
BolC3t19451H Brassica oleracea HOM05D002696 ORTHO05D003940 2.8e-37 159.8 145 61.4
Carub.0005s1355 Capsella rubella HOM05D002696 ORTHO05D003940 2.8e-37 159.8 140 61.4
FvH4_7g27690 Fragaria vesca HOM05D002696 ORTHO05D019089 1.4e-36 157.5 152 61.8
Lalb_Chr01g0008021 Lupinus albus HOM05D002696 ORTHO05D003940 1.8e-36 157.1 116 73.3
Sp5g14420 Schrenkiella parvula HOM05D002696 ORTHO05D003940 2.4e-36 156.8 140 61.4
SEGI_28050 Sequoiadendron giganteum HOM05D002696 ORTHO05D003940 2.4e-36 156.8 155 56.1
FAN06G4118 Fragaria x ananassa HOM05D002696 ORTHO05D003940 6.9e-36 155.2 171 57.3
FAN06G1881 Fragaria x ananassa HOM05D002696 ORTHO05D003940 1.2e-35 154.5 145 64.1
FAN10G0424 Fragaria x ananassa HOM05D002696 ORTHO05D003940 4.5e-35 152.5 171 56.7
Gorai.001G049100 Gossypium raimondii HOM05D002696 ORTHO05D003940 2.9e-34 149.8 158 56.3
FAN03G1343 Fragaria x ananassa HOM05D002696 ORTHO05D003940 3.8e-34 149.4 176 53.4
SMO076G0001 Selaginella moellendorffii HOM05D002696 ORTHO05D003940 5.0e-34 149.1 170 48.2
HPP92_013639 Vanilla planifolia HOM05D002696 ORTHO05D003940 8.5e-34 148.3 156 55.8
FAN06G4793 Fragaria x ananassa HOM05D002696 ORTHO05D019089 3.2e-33 146.4 134 64.2
AagrBONN_evm.TU.Sc2ySwM_344.3408 Anthoceros agrestis HOM05D002696 ORTHO05D003940 1.6e-32 144.1 171 48.0
Actinidia20692 Actinidia chinensis HOM05D002696 ORTHO05D003940 3.6e-32 142.9 98 78.6
FAN06G0680 Fragaria x ananassa HOM05D002696 ORTHO05D019089 3.6e-32 142.9 99 77.8
FvH4_7g28372 Fragaria vesca HOM05D002696 ORTHO05D023279 1.0e-31 141.4 158 56.3
Pp3c13_8840 Physcomitrium patens HOM05D002696 ORTHO05D003940 1.4e-31 141.0 157 49.7
Dinv28586 Davidia involucrata HOM05D002696 ORTHO05D019089 9.1e-28 128.3 74 94.6
Mapoly0005s0174 Marchantia polymorpha HOM05D002696 ORTHO05D003940 6.5e-26 122.1 166 41.6
FAN06G4003 Fragaria x ananassa HOM05D002696 ORTHO05D003940 1.1e-25 121.3 154 53.2
Gohir.A07G041900 Gossypium hirsutum HOM05D002696 ORTHO05D003940 1.0e-23 114.8 122 57.4
Gohir.D07G046000 Gossypium hirsutum HOM05D002696 ORTHO05D003940 8.8e-23 111.7 164 45.7
FAN10G2221 Fragaria x ananassa HOM05D005822 ORTHO05D007267 5.7e-22 109.0 127 55.1
FAN10G3229 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.3e-21 107.8 138 52.2
SEGI_38350 Sequoiadendron giganteum HOM05D002696 ORTHO05D003940 4.1e-20 102.8 141 42.6
FAN06G2222 Fragaria x ananassa HOM05D002696 ORTHO05D003940 1.3e-18 97.8 111 50.5
CBR_g40808 Chara braunii HOM05D002696 ORTHO05D003940 2.9e-18 96.7 162 43.2
FAN06G0913 Fragaria x ananassa HOM05D002696 ORTHO05D019089 5.5e-17 92.4 73 71.2
QL09p005491 Quercus lobata HOM05D002696 ORTHO05D003940 6.8e-15 85.5 58 75.9
SGA_v2.0_scaffold46G17417 Striga asiatica HOM05D002696 ORTHO05D019089 1.7e-13 80.9 131 48.1
MCO13G593 Micromonas commoda HOM05D002696 ORTHO05D003940 1.5e-09 67.8 115 36.5
FAN06G3863 Fragaria x ananassa HOM05D002696 ORTHO05D011600 1.6e-08 64.3 48 70.8
Cfa024848 Carpinus fangiana HOM05D002696 ORTHO05D003940 2.6e-06 57.0 165 24.2
PRCOL_00001774 Prasinoderma coloniale HOM05D002696 ORTHO05D003940 7.5e-06 55.5 111 35.1


User provided reference genes

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