Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26831 Davidia involucrata HOM05D003684 ORTHO05D004428 0.0e+00 1531.5 797 100.0
Duzib213G0690 Durio zibethinus HOM05D003684 ORTHO05D004428 5.5e-312 1074.7 792 73.7
Thecc.07G170900 Theobroma cacao HOM05D003684 ORTHO05D004428 1.5e-304 1049.3 791 73.5
TAR381G1133 Trochodendron aralioides HOM05D003684 ORTHO05D004428 3.7e-303 1044.6 788 71.1
Gorai.002G106900 Gossypium raimondii HOM05D003684 ORTHO05D004428 2.4e-302 1042.0 792 73.6
Cfa020930 Carpinus fangiana HOM05D003684 ORTHO05D004428 8.6e-300 1033.5 787 71.2
Manes.13G154400 Manihot esculenta HOM05D003684 ORTHO05D004428 8.6e-300 1033.5 792 72.3
COL.COLO4_36995 Corchorus olitorius HOM05D003684 ORTHO05D004428 4.3e-299 1031.2 791 71.9
Duzib187G1616 Durio zibethinus HOM05D003684 ORTHO05D004428 1.4e-297 1026.2 791 72.1
RcHm_v2.0_Chr3g0485021 Rosa chinensis HOM05D003684 ORTHO05D004428 2.3e-297 1025.4 786 71.0
Ciclev10024915m.g Citrus clementina HOM05D003684 ORTHO05D004428 1.9e-294 1015.8 785 70.7
Atru.chr3.1442 Acer truncatum HOM05D003684 ORTHO05D004428 7.8e-293 1010.4 780 70.9
Oeu063702.1 Olea europaea HOM05D003684 ORTHO05D004428 1.7e-292 1009.2 791 68.0
CsaV3_2G019660 Cucumis sativus L. HOM05D003684 ORTHO05D004428 2.1e-290 1002.3 788 69.0
Actinidia19941 Actinidia chinensis HOM05D003684 ORTHO05D004428 6.2e-290 1000.7 790 71.0
Solyc05g056340.3 Solanum lycopersicum HOM05D003684 ORTHO05D004428 1.2e-288 996.5 786 68.8
Sed0026164 Sechium edule HOM05D003684 ORTHO05D004428 2.0e-288 995.7 785 69.0
Potri.T044700 Populus trichocarpa HOM05D003684 ORTHO05D004428 4.4e-288 994.6 789 69.3
Potri.018G145560 Populus trichocarpa HOM05D003684 ORTHO05D004428 7.6e-288 993.8 790 69.1
Sopen05g034730 Solanum pennellii HOM05D003684 ORTHO05D004428 2.2e-287 992.3 786 68.7
CiPaw.16G119400 Carya illinoinensis HOM05D003684 ORTHO05D004428 1.9e-286 989.2 787 69.0
Potri.004G135800 Populus trichocarpa HOM05D003684 ORTHO05D004428 9.3e-286 986.9 790 69.5
FvH4_1g25880 Fragaria vesca HOM05D003684 ORTHO05D004428 3.5e-285 984.9 786 68.3
CAN.G1156.25 Capsicum annuum HOM05D003684 ORTHO05D004428 1.5e-283 979.5 833 64.7
Glyma.10G175900 Glycine max HOM05D003684 ORTHO05D004428 2.5e-283 978.8 803 66.6
Gohir.A01G097200 Gossypium hirsutum HOM05D003684 ORTHO05D004428 2.5e-283 978.8 792 70.6
Lj5g0014818 Lotus japonicus HOM05D003684 ORTHO05D004428 4.8e-282 974.5 797 66.2
FAN28G1615 Fragaria x ananassa HOM05D003684 ORTHO05D004428 1.8e-281 972.6 786 67.9
TWI31G1361 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 3.1e-281 971.8 788 68.5
VMungo0720G1706 Vigna mungo HOM05D003684 ORTHO05D004428 6.9e-281 970.7 789 66.4
Prupe.4G280600 Prunus persica HOM05D003684 ORTHO05D004428 2.6e-280 968.8 728 72.8
PGR119G1631 Punica granatum HOM05D003684 ORTHO05D004428 2.6e-280 968.8 792 67.9
FAN19G3168 Fragaria x ananassa HOM05D003684 ORTHO05D004428 4.4e-280 968.0 786 67.7
Gohir.D01G081800 Gossypium hirsutum HOM05D003684 ORTHO05D004428 8.4e-279 963.8 686 76.2
Phvul.007G114500 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 8.4e-279 963.8 804 65.5
Sabra04G0082300 Salix brachista HOM05D003684 ORTHO05D004428 7.1e-278 960.7 807 67.2
Phvul.004G132300 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 1.3e-276 956.4 791 66.4
FAN26G1029 Fragaria x ananassa HOM05D003684 ORTHO05D004428 6.6e-276 954.1 786 67.0
Glyma.20G214600 Glycine max HOM05D003684 ORTHO05D004428 3.3e-275 951.8 803 65.4
Lalb_Chr06g0168741 Lupinus albus HOM05D003684 ORTHO05D004428 8.4e-271 937.2 791 65.7
Glyma.09G157300 Glycine max HOM05D003684 ORTHO05D004428 7.1e-270 934.1 791 65.7
Peaxi162Scf00819g00027 Petunia axillaris HOM05D003684 ORTHO05D004428 1.2e-269 933.3 809 64.5
FAN23G1204 Fragaria x ananassa HOM05D003684 ORTHO05D004428 7.9e-269 930.6 786 65.8
MD15G1140800 Malus domestica HOM05D003684 ORTHO05D004428 1.8e-268 929.5 834 64.3
Rhsim10G0125000 Rhododendron simsii HOM05D003684 ORTHO05D004428 1.6e-266 922.9 948 58.9
Ca_09907_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 3.4e-264 915.2 827 62.6
Psat6g111880 Pisum sativum HOM05D003684 ORTHO05D004428 2.9e-263 912.1 812 63.1
arahy.Tifrunner.gnm1.ann1.88FPG1 Arachis hypogaea HOM05D003684 ORTHO05D004428 6.7e-260 901.0 794 63.4
arahy.Tifrunner.gnm1.ann1.554WMS Arachis hypogaea HOM05D003684 ORTHO05D004428 8.7e-260 900.6 794 63.4
Glyma.16G207900 Glycine max HOM05D003684 ORTHO05D004428 7.4e-259 897.5 793 63.9
Migut.M00001 Erythranthe guttata HOM05D003684 ORTHO05D004428 1.6e-258 896.3 793 63.9
SGA_v2.0_scaffold12G06270 Striga asiatica HOM05D003684 ORTHO05D004428 3.1e-257 892.1 797 63.2
Lalb_Chr02g0149761 Lupinus albus HOM05D003684 ORTHO05D004428 5.8e-256 887.9 792 62.5
MSTRG.23231 Avicennia marina HOM05D003684 ORTHO05D004428 1.2e-253 880.2 784 63.0
Aqoxy5G02639 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 5.1e-252 874.8 781 61.7
Peaxi162Scf00353g00740 Petunia axillaris HOM05D003684 ORTHO05D004428 1.3e-250 870.2 783 63.7
arahy.Tifrunner.gnm1.ann1.XFQ1DZ Arachis hypogaea HOM05D003684 ORTHO05D004428 6.3e-250 867.8 806 62.0
Lalb_Chr21g0311771 Lupinus albus HOM05D003684 ORTHO05D004428 3.8e-247 858.6 791 61.4
TWI79G1581 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 7.9e-245 850.9 793 62.9
Ah.06g188290 Amaranthus hybridus HOM05D003684 ORTHO05D004428 4.3e-243 845.1 784 60.6
EL10Ac4g09714 Beta vulgaris HOM05D003684 ORTHO05D004428 4.3e-243 845.1 789 62.2
Medtr1g077090 Medicago truncatula HOM05D003684 ORTHO05D004428 7.4e-243 844.3 810 59.8
vmacro12735 Vaccinium macrocarpon HOM05D003684 ORTHO05D004428 3.7e-242 842.0 1014 53.7
VMungo0464G0733 Vigna mungo HOM05D003684 ORTHO05D004428 3.7e-242 842.0 802 61.0
Hund21769 Selenicereus undatus HOM05D003684 ORTHO05D004428 1.8e-236 823.2 730 64.1
Ca_25251_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 1.5e-235 820.1 814 59.8
THA.LOC104800528 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 2.0e-232 809.7 828 56.8
ClCG02G000160 Citrullus lanatus HOM05D003684 ORTHO05D004428 1.7e-231 806.6 787 59.8
THA.LOC104818396 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 1.7e-231 806.6 829 57.4
Medtr6g065070 Medicago truncatula HOM05D003684 ORTHO05D004428 3.8e-231 805.4 729 61.9
Nitab4.5_0000496g0270 Nicotiana tabacum HOM05D003684 ORTHO05D004428 8.5e-231 804.3 785 59.9
Lj2g0008338 Lotus japonicus HOM05D003684 ORTHO05D004428 2.1e-229 799.7 789 59.8
Aa31LG3G18080 Aethionema arabicum HOM05D003684 ORTHO05D004428 4.1e-225 785.4 839 57.0
AUR62000586 Chenopodium quinoa HOM05D003684 ORTHO05D004428 3.5e-224 782.3 799 57.6
Nitab4.5_0006957g0020 Nicotiana tabacum HOM05D003684 ORTHO05D004428 4.5e-224 781.9 789 58.7
TPR.G40356 Trifolium pratense HOM05D003684 ORTHO05D004428 4.7e-221 771.9 784 57.8
CANSAT54G1806 Cannabis sativa HOM05D003684 ORTHO05D004428 3.0e-220 769.2 648 67.7
CARHR204550 Cardamine hirsuta HOM05D003684 ORTHO05D004428 9.8e-219 764.2 795 57.4
AL6G18920 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 7.0e-217 758.1 891 53.9
Carub.0006s0737 Capsella rubella HOM05D003684 ORTHO05D004428 7.0e-217 758.1 886 53.6
Thhalv10012626m.g Eutrema salsugineum HOM05D003684 ORTHO05D004428 4.0e-212 742.3 883 53.3
CiPaw.15G185900 Carya illinoinensis HOM05D003684 ORTHO05D004428 5.2e-212 741.9 506 76.9
Potri.T044400 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.7e-210 736.9 638 65.5
ECA248G2431 Erigeron canadensis HOM05D003684 ORTHO05D004428 4.9e-210 735.3 791 56.8
HanXRQChr11g0336971 Helianthus annuus HOM05D003684 ORTHO05D004428 1.4e-209 733.8 724 59.8
GSVIVG01000253001 Vitis vinifera HOM05D003684 ORTHO05D004428 1.7e-207 726.9 429 86.5
AT5G08450 Arabidopsis thaliana HOM05D003684 ORTHO05D004428 2.8e-205 719.5 894 52.2
TPR.G16631 Trifolium pratense HOM05D003684 ORTHO05D004428 3.6e-205 719.2 522 72.4
AUR62006943 Chenopodium quinoa HOM05D003684 ORTHO05D004428 3.0e-204 716.1 787 55.0
Lsat_1_v5_gn_1_130380 Lactuca sativa HOM05D003684 ORTHO05D004428 4.9e-202 708.8 807 55.3
BcaB01g05594 Brassica carinata HOM05D003684 ORTHO05D004428 1.1e-201 707.6 774 56.6
Sp6g34450 Schrenkiella parvula HOM05D003684 ORTHO05D004428 5.4e-201 705.3 890 51.0
unitig_736.g22645 Utricularia gibba HOM05D003684 ORTHO05D004428 5.6e-198 695.3 792 52.7
Os07g0477500 Oryza sativa ssp. japonica HOM05D003684 ORTHO05D004428 3.6e-197 692.6 787 53.4
HPP92_003712 Vanilla planifolia HOM05D003684 ORTHO05D004428 6.2e-197 691.8 790 53.2
BolC3t12968H Brassica oleracea HOM05D003684 ORTHO05D004428 8.0e-197 691.4 872 51.9
A03p03860 Brassica napus HOM05D003684 ORTHO05D004428 1.4e-196 690.6 876 51.5
BraA03t09733Z Brassica rapa HOM05D003684 ORTHO05D004428 4.0e-196 689.1 885 51.1
CDE08G0027 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 5.2e-196 688.7 784 52.3
unitig_899.g14642 Utricularia gibba HOM05D003684 ORTHO05D004428 2.0e-195 686.8 793 52.5
C03p04350 Brassica napus HOM05D003684 ORTHO05D004428 5.8e-195 685.3 877 51.4
Nn1g08436 Nelumbo nucifera HOM05D003684 ORTHO05D004428 1.6e-192 677.2 669 60.2
MSTRG.2470 Avicennia marina HOM05D003684 ORTHO05D004428 3.3e-190 669.5 603 63.5
PSO170G2972 Papaver somniferum HOM05D003684 ORTHO05D004428 6.8e-188 661.8 882 48.0
PSO782G3749 Papaver somniferum HOM05D003684 ORTHO05D004428 2.2e-186 656.8 885 48.4
Zm00001eb178520 Zea mays HOM05D003684 ORTHO05D004428 4.3e-182 642.5 787 51.3
Zm00001eb108610 Zea mays HOM05D003684 ORTHO05D004428 4.0e-180 636.0 789 52.3
Psat0s3859g0040 Pisum sativum HOM05D003684 ORTHO05D004428 5.4e-177 625.5 781 50.4
DCAR_009623 Daucus carota HOM05D003684 ORTHO05D004428 5.4e-169 599.0 379 78.6
SHI11408 Sapria himalayana HOM05D003684 ORTHO05D004428 3.3e-158 563.1 811 46.5
AL6G19100 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 4.5e-155 552.7 1055 40.6
Cpa.g.sc138.52 Carica papaya HOM05D003684 ORTHO05D004428 1.1e-153 548.1 322 83.2
Sc09g0001960 Simmondsia chinensis HOM05D003684 ORTHO05D004428 2.7e-152 543.5 307 87.3
Sabra19G0000700 Salix brachista HOM05D003684 ORTHO05D004428 1.3e-149 534.6 324 81.5
Sabra19G0012100 Salix brachista HOM05D003684 ORTHO05D004428 9.3e-145 518.5 324 79.0
HPP92_003711 Vanilla planifolia HOM05D003684 ORTHO05D004428 1.6e-144 517.7 679 48.9
SalBow8G3946 Salvia bowleyana HOM05D003684 ORTHO05D004428 3.5e-144 516.5 369 71.5
Lj2C616T2 Lonicera japonica HOM05D003684 ORTHO05D004428 2.6e-139 500.4 576 59.5
Oeu034403.1 Olea europaea HOM05D003684 ORTHO05D004428 1.0e-138 498.4 470 58.9
CSS0015943 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 8.4e-138 495.4 477 65.8
Cc07_g19760 Coffea canephora HOM05D003684 ORTHO05D004428 1.4e-137 494.6 307 77.5
BcaB08g37259 Brassica carinata HOM05D003684 ORTHO05D004428 1.2e-136 491.5 413 63.4
Actinidia36575 Actinidia chinensis HOM05D003684 ORTHO05D004428 1.8e-135 487.6 376 69.7
Sc06g0005260 Simmondsia chinensis HOM05D003684 ORTHO05D004428 9.7e-134 481.9 483 57.1
PGSC0003DMG400023330 Solanum tuberosum HOM05D003684 ORTHO05D004428 4.8e-133 479.6 462 61.3
BraA10t44878Z Brassica rapa HOM05D003684 ORTHO05D004428 1.2e-131 474.9 323 74.0
C09p68560 Brassica napus HOM05D003684 ORTHO05D004428 2.0e-131 474.2 346 69.9
Haze_19362 Corylus avellana HOM05D003684 ORTHO05D004428 2.5e-129 467.2 467 59.7
ATR1136G078 Amborella trichopoda HOM05D003684 ORTHO05D004428 7.7e-123 445.7 316 69.9
A10p28300 Brassica napus HOM05D003684 ORTHO05D004428 2.2e-122 444.1 344 66.9
MELO3C023205.2 Cucumis melo HOM05D003684 ORTHO05D004428 5.0e-122 443.0 464 56.5
BolC9t59599H Brassica oleracea HOM05D003684 ORTHO05D004428 2.3e-119 434.1 347 65.7
DCAR_019948 Daucus carota HOM05D003684 ORTHO05D004428 2.6e-118 430.6 386 58.0
Oeu034404.1 Olea europaea HOM05D003684 ORTHO05D004428 3.1e-116 423.7 263 81.0
Potri.018G145546 Populus trichocarpa HOM05D003684 ORTHO05D004428 3.5e-115 420.2 240 87.1
Lj2C616G3 Lonicera japonica HOM05D003684 ORTHO05D004428 5.2e-111 406.4 284 74.6
Pp3c3_32800 Physcomitrium patens HOM05D003684 ORTHO05D004428 8.8e-111 405.6 482 49.0
Cpa.g.sc138.51 Carica papaya HOM05D003684 ORTHO05D004428 1.1e-110 405.2 363 63.1
DCAR_009622 Daucus carota HOM05D003684 ORTHO05D004428 4.8e-109 399.8 414 58.0
MBI03_g18673_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 6.5e-106 389.4 242 81.0
Pp3c8_5360 Physcomitrium patens HOM05D003684 ORTHO05D004428 2.1e-104 384.4 503 47.9
Sabra19G0011700 Salix brachista HOM05D003684 ORTHO05D004428 3.6e-104 383.6 471 52.7
SMO356G0426 Selaginella moellendorffii HOM05D003684 ORTHO05D004428 1.0e-103 382.1 458 50.2
Pp3c3_30960 Physcomitrium patens HOM05D003684 ORTHO05D004428 5.2e-103 379.8 402 51.0
HPP92_007640 Vanilla planifolia HOM05D003684 ORTHO05D004428 3.4e-102 377.1 640 40.3
AagrBONN_evm.TU.Sc2ySwM_228.5259 Anthoceros agrestis HOM05D003684 ORTHO05D004428 8.0e-96 355.9 408 50.5
CDE02G3206 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 1.4e-95 355.1 606 40.3
SGA_v2.0_scaffold51G18855 Striga asiatica HOM05D003684 ORTHO05D004428 2.0e-94 351.3 452 46.9
Mapoly0050s0019 Marchantia polymorpha HOM05D003684 ORTHO05D004428 3.1e-92 344.0 711 39.8
Potri.018G145542 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.3e-90 338.6 355 58.6
Sc09g0001970 Simmondsia chinensis HOM05D003684 ORTHO05D004428 1.0e-87 328.9 465 49.9
ATR1136G068 Amborella trichopoda HOM05D003684 ORTHO05D004428 3.6e-72 277.3 468 42.9
CBR_g645 Chara braunii HOM05D003684 ORTHO05D004428 5.1e-66 256.9 379 41.2
CSS0049380 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 3.6e-64 250.8 235 60.9
Cc07_g19750 Coffea canephora HOM05D003684 ORTHO05D004428 5.8e-62 243.4 185 67.6
Ciclev10026566m.g Citrus clementina HOM05D003684 ORTHO05D004428 1.7e-61 241.9 154 81.2
MSTRG.2469 Avicennia marina HOM05D003684 ORTHO05D004428 1.6e-59 235.3 161 73.9
MCO05G109 Micromonas commoda HOM05D003684 ORTHO05D004428 4.3e-57 227.3 378 37.3
HanXRQChr01g0009441 Helianthus annuus HOM05D003684 ORTHO05D004428 2.1e-56 224.9 179 66.5
CDE02G3840 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 1.1e-52 212.6 150 73.3
Aqoxy391s001 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 3.3e-49 201.1 101 96.0
Cre03.g182600 Chlamydomonas reinhardtii HOM05D003684 ORTHO05D004428 3.3e-49 201.1 316 37.7
MBI01_g42406_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 8.7e-42 176.4 119 73.9
Cc00_g24540 Coffea canephora HOM05D003684 ORTHO05D004428 2.0e-38 165.2 85 88.2
PRCOL_00004531 Prasinoderma coloniale HOM05D003684 ORTHO05D028742 8.4e-37 159.8 363 33.9
Cc07_g19740 Coffea canephora HOM05D003684 ORTHO05D004428 2.3e-34 151.8 112 66.1
TPR.G16635 Trifolium pratense HOM05D003684 ORTHO05D004428 7.1e-28 130.2 227 41.0
Mapoly0024s0027 Marchantia polymorpha HOM05D003684 ORTHO05D004428 2.1e-27 128.6 564 28.5
Lsat_1_v5_gn_6_89680 Lactuca sativa HOM05D003684 ORTHO05D004428 3.5e-27 127.9 218 41.7
Ciclev10003222m.g Citrus clementina HOM05D003684 ORTHO05D004428 3.1e-23 114.8 127 54.3
HanXRQChr17g0567611 Helianthus annuus HOM05D003684 ORTHO05D004428 1.5e-22 112.5 62 83.9
Sabra01G0044800 Salix brachista HOM05D003684 ORTHO05D004428 4.5e-22 110.9 65 83.1
CSS0003103 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 6.5e-21 107.1 66 77.3
SEGI_34739 Sequoiadendron giganteum HOM05D003684 ORTHO05D004428 4.2e-20 104.4 96 57.3
CSS0033146 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 3.6e-19 101.3 58 81.0
EL10Ac2g03383 Beta vulgaris HOM05D000039 ORTHO05D001729 1.0e-10 73.2 59 62.7
Potri.018G145552 Populus trichocarpa HOM05D003684 ORTHO05D004428 3.0e-10 71.6 39 89.7
arahy.Tifrunner.gnm1.ann1.32AA53 Arachis hypogaea HOM05D003684 ORTHO05D001254 5.1e-10 70.9 52 67.3
Ciclev10003442m.g Citrus clementina HOM05D003684 ORTHO05D004428 1.5e-09 69.3 47 74.5
EL10Ac9g22716 Beta vulgaris HOM05D003684 ORTHO05D004428 5.7e-09 67.4 32 87.5
Ciclev10003579m.g Citrus clementina HOM05D003684 ORTHO05D004428 7.4e-09 67.0 56 62.5
Ca_09910_v3 Cicer arietinum L. HOM05D003095 ORTHO05D003517 1.1e-07 63.2 56 58.9


User provided reference genes

Program Settings