Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26502 Davidia involucrata HOM05D003955 ORTHO05D004684 0.0e+00 1292.3 717 100.0
Hma1.2p1_0669F.1_g200270 Hydrangea macrophylla HOM05D003955 ORTHO05D004684 6.6e-299 1030.4 618 87.7
TAR622G0688 Trochodendron aralioides HOM05D003955 ORTHO05D004684 2.7e-292 1008.4 605 83.5
TAR374G0009 Trochodendron aralioides HOM05D003955 ORTHO05D004684 3.0e-291 1005.0 605 86.3
vmacro16423 Vaccinium macrocarpon HOM05D003955 ORTHO05D004684 1.1e-290 1003.0 606 86.1
Rhsim12G0139700 Rhododendron simsii HOM05D003955 ORTHO05D004684 2.3e-288 995.3 606 85.8
GSVIVG01008399001 Vitis vinifera HOM05D003955 ORTHO05D004684 5.2e-288 994.2 605 84.1
Thecc.03G050300 Theobroma cacao HOM05D003955 ORTHO05D004684 4.3e-282 974.5 605 81.3
CSS0005322 Camellia sinensis var. sinensis HOM05D003955 ORTHO05D004684 6.2e-281 970.7 605 83.0
Gorai.007G004500 Gossypium raimondii HOM05D003955 ORTHO05D004684 1.4e-280 969.5 605 80.7
Gohir.D11G003500 Gossypium hirsutum HOM05D003955 ORTHO05D004684 3.1e-280 968.4 605 80.5
TWI15G0606 Tripterygium wilfordii HOM05D003955 ORTHO05D004684 3.1e-280 968.4 605 77.7
Cpa.g.sc3.440 Carica papaya HOM05D003955 ORTHO05D004684 4.0e-280 968.0 605 82.1
MSTRG.9290 Avicennia marina HOM05D003955 ORTHO05D004684 6.8e-280 967.2 605 77.4
Gohir.A11G004000 Gossypium hirsutum HOM05D003955 ORTHO05D004684 5.8e-279 964.1 605 81.0
Nitab4.5_0001158g0090 Nicotiana tabacum HOM05D003955 ORTHO05D004684 2.2e-278 962.2 616 79.7
Nitab4.5_0001644g0090 Nicotiana tabacum HOM05D003955 ORTHO05D004684 1.9e-277 959.1 627 78.1
Dinv05158 Davidia involucrata HOM05D003955 ORTHO05D004684 3.2e-277 958.4 606 80.2
Cfa019689 Carpinus fangiana HOM05D003955 ORTHO05D004684 5.4e-277 957.6 605 83.1
Migut.D01456 Erythranthe guttata HOM05D003955 ORTHO05D004684 9.2e-277 956.8 605 79.7
PGSC0003DMG400005655 Solanum tuberosum HOM05D003955 ORTHO05D004684 2.7e-276 955.3 604 80.3
QL10p027883 Quercus lobata HOM05D003955 ORTHO05D004684 3.5e-276 954.9 605 83.6
Peaxi162Scf00683g00157 Petunia axillaris HOM05D003955 ORTHO05D004684 2.3e-275 952.2 604 82.5
Manes.06G008300 Manihot esculenta HOM05D003955 ORTHO05D004684 3.0e-275 951.8 605 82.3
Sopen03g037980 Solanum pennellii HOM05D003955 ORTHO05D004684 1.5e-274 949.5 604 79.3
CANSAT80G2537 Cannabis sativa HOM05D003955 ORTHO05D004684 5.6e-274 947.6 605 79.7
Solyc03g119090.3 Solanum lycopersicum HOM05D003955 ORTHO05D004684 5.6e-274 947.6 604 79.3
Ciclev10007782m.g Citrus clementina HOM05D003955 ORTHO05D004684 7.3e-274 947.2 605 80.2
CiPaw.15G139700 Carya illinoinensis HOM05D003955 ORTHO05D004684 1.2e-273 946.4 605 82.0
SGA_v2.0_scaffold25G10972 Striga asiatica HOM05D003955 ORTHO05D004684 1.2e-273 946.4 604 80.0
Aqoxy3G04013 Aquilegia oxysepala HOM05D003955 ORTHO05D004684 2.4e-272 942.2 605 80.5
CsaV3_1G004220 Cucumis sativus L. HOM05D003955 ORTHO05D004684 9.9e-271 936.8 605 76.5
Glyma.05G243900 Glycine max HOM05D003955 ORTHO05D004684 1.7e-270 936.0 603 78.6
TWI81G0555 Tripterygium wilfordii HOM05D003955 ORTHO05D004684 1.7e-270 936.0 595 76.5
PSO782G1387 Papaver somniferum HOM05D003955 ORTHO05D004684 2.9e-270 935.3 605 78.2
ClCG06G014440 Citrullus lanatus HOM05D003955 ORTHO05D004684 4.9e-270 934.5 600 76.5
MELO3C017347.2 Cucumis melo HOM05D003955 ORTHO05D004684 4.9e-270 934.5 605 76.9
COL.COLO4_22318 Corchorus olitorius HOM05D003955 ORTHO05D004684 1.4e-269 932.9 632 75.6
RcHm_v2.0_Chr7g0178701 Rosa chinensis HOM05D003955 ORTHO05D004684 1.9e-269 932.6 605 80.3
THA.LOC104820357 Tarenaya hassleriana HOM05D003955 ORTHO05D004684 1.9e-269 932.6 604 77.6
VMungo0251G3447 Vigna mungo HOM05D003955 ORTHO05D004684 1.9e-269 932.6 603 78.3
Haze_18797 Corylus avellana HOM05D003955 ORTHO05D004684 2.4e-269 932.2 608 81.6
DCAR_014770 Daucus carota HOM05D003955 ORTHO05D004684 2.4e-269 932.2 605 77.2
Sed0014282 Sechium edule HOM05D003955 ORTHO05D004684 2.4e-269 932.2 605 76.5
Glyma.08G051900 Glycine max HOM05D003955 ORTHO05D004684 1.6e-268 929.5 603 77.9
Potri.015G041200 Populus trichocarpa HOM05D003955 ORTHO05D004684 1.6e-268 929.5 605 80.5
Sabra12G0034600 Salix brachista HOM05D003955 ORTHO05D004684 2.1e-268 929.1 618 77.0
Lj4g0027787 Lotus japonicus HOM05D003955 ORTHO05D004684 4.6e-268 927.9 603 77.6
CDE04G0774 Ceratophyllum demersum HOM05D003955 ORTHO05D004684 2.3e-267 925.6 605 79.0
Potri.012G049200 Populus trichocarpa HOM05D003955 ORTHO05D004684 2.3e-267 925.6 605 80.2
MD14G1234400 Malus domestica HOM05D003955 ORTHO05D004684 8.7e-267 923.7 603 78.6
Sed0001638 Sechium edule HOM05D003955 ORTHO05D004684 1.1e-266 923.3 605 75.7
Prupe.5G230600 Prunus persica HOM05D003955 ORTHO05D004684 1.9e-266 922.5 605 79.8
PSO063G1948 Papaver somniferum HOM05D003955 ORTHO05D004684 4.3e-266 921.4 605 77.4
Lalb_Chr05g0221841 Lupinus albus HOM05D003955 ORTHO05D004684 5.6e-266 921.0 603 77.6
Phvul.002G327600 Phaseolus vulgaris HOM05D003955 ORTHO05D004684 2.8e-265 918.7 603 79.3
Lj2A556T29 Lonicera japonica HOM05D003955 ORTHO05D004684 3.6e-265 918.3 606 79.0
HanXRQChr10g0314661 Helianthus annuus HOM05D003955 ORTHO05D004684 4.7e-265 917.9 605 76.4
FAN18G0775 Fragaria x ananassa HOM05D003955 ORTHO05D004684 8.1e-265 917.1 605 79.2
FvH4_5g17110 Fragaria vesca HOM05D003955 ORTHO05D004684 1.1e-264 916.8 605 79.5
MD06G1229500 Malus domestica HOM05D003955 ORTHO05D004684 6.9e-264 914.1 603 78.4
Oeu061232.2 Olea europaea HOM05D003955 ORTHO05D004684 9.9e-263 910.2 683 69.1
Psat7g000120 Pisum sativum HOM05D003955 ORTHO05D004684 1.7e-262 909.4 603 76.5
Sabra15G0055900 Salix brachista HOM05D003955 ORTHO05D004684 2.2e-262 909.1 658 73.9
FAN04G3226 Fragaria x ananassa HOM05D003955 ORTHO05D004684 2.9e-262 908.7 616 77.9
FAN08G2535 Fragaria x ananassa HOM05D003955 ORTHO05D004684 2.9e-262 908.7 616 78.1
FAN13G1787 Fragaria x ananassa HOM05D003955 ORTHO05D004684 2.9e-262 908.7 616 78.1
Ca_17215_v3 Cicer arietinum L. HOM05D003955 ORTHO05D004684 4.9e-262 907.9 602 76.9
Ca_17217_v3 Cicer arietinum L. HOM05D003955 ORTHO05D004684 4.9e-262 907.9 602 76.9
PGR083G2578 Punica granatum HOM05D003955 ORTHO05D004684 4.9e-262 907.9 604 77.0
Atru.chr11.420 Acer truncatum HOM05D003955 ORTHO05D004684 1.6e-260 902.9 605 74.9
Eucgr.K02263 Eucalyptus grandis HOM05D003955 ORTHO05D004684 2.1e-260 902.5 607 77.4
Sabra15G0063600 Salix brachista HOM05D003955 ORTHO05D004684 1.0e-259 900.2 611 78.1
COL.COLO4_20464 Corchorus olitorius HOM05D003955 ORTHO05D004684 1.3e-259 899.8 605 71.9
Sp3g16180 Schrenkiella parvula HOM05D003955 ORTHO05D004684 3.0e-259 898.7 604 75.3
Aa31LG8G4920 Aethionema arabicum HOM05D003955 ORTHO05D004684 3.9e-259 898.3 604 74.3
Medtr8g106820 Medicago truncatula HOM05D003955 ORTHO05D004684 6.6e-259 897.5 603 76.0
Lsat_1_v5_gn_5_91461 Lactuca sativa HOM05D003955 ORTHO05D004684 8.7e-259 897.1 605 75.2
Thhalv10020321m.g Eutrema salsugineum HOM05D003955 ORTHO05D004684 1.3e-257 893.3 603 75.3
Gorai.002G180400 Gossypium raimondii HOM05D003955 ORTHO05D004684 1.3e-257 893.3 607 70.3
ATR0686G116 Amborella trichopoda HOM05D003955 ORTHO05D004684 1.6e-257 892.9 606 75.1
DCAR_023230 Daucus carota HOM05D003955 ORTHO05D004684 2.1e-257 892.5 604 72.8
ECA234G1883 Erigeron canadensis HOM05D003955 ORTHO05D004684 1.4e-256 889.8 593 76.6
CARHR093380 Cardamine hirsuta HOM05D003955 ORTHO05D004684 1.8e-256 889.4 603 74.6
Manes.15G126700 Manihot esculenta HOM05D003955 ORTHO05D004684 5.3e-256 887.9 605 75.0
Lj6A27G8 Lonicera japonica HOM05D003955 ORTHO05D004684 3.4e-255 885.2 688 70.9
Ciclev10014635m.g Citrus clementina HOM05D003955 ORTHO05D004684 1.3e-254 883.2 603 73.1
Carub.0003s1778 Capsella rubella HOM05D003955 ORTHO05D004684 1.7e-254 882.9 603 74.3
AUR62041238 Chenopodium quinoa HOM05D003955 ORTHO05D004684 7.1e-253 877.5 606 73.6
AL3G31220 Arabidopsis lyrata HOM05D003955 ORTHO05D004684 1.6e-252 876.3 603 74.0
AUR62014196 Chenopodium quinoa HOM05D003955 ORTHO05D004684 1.6e-252 876.3 606 71.0
Sc11g0004100 Simmondsia chinensis HOM05D003955 ORTHO05D004684 2.1e-252 875.9 605 73.9
AT3G18060 Arabidopsis thaliana HOM05D003955 ORTHO05D004684 4.6e-252 874.8 605 73.4
Cpa.g.sc211.2 Carica papaya HOM05D003955 ORTHO05D004684 3.3e-250 868.6 606 74.1
BolC5t33552H Brassica oleracea HOM05D003955 ORTHO05D004684 1.3e-249 866.7 602 73.3
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 4.8e-249 864.8 604 72.7
A05p31710 Brassica napus HOM05D003955 ORTHO05D004684 1.4e-248 863.2 602 72.9
BraA05t22004Z Brassica rapa HOM05D003955 ORTHO05D004684 1.4e-248 863.2 602 72.9
C05p48110 Brassica napus HOM05D003955 ORTHO05D004684 6.9e-248 860.9 602 72.6
Glyma.20G126400 Glycine max HOM05D003955 ORTHO05D004684 1.5e-247 859.8 608 70.7
Medtr1g107560 Medicago truncatula HOM05D003955 ORTHO05D004684 2.6e-247 859.0 604 68.4
Nn4g24112 Nelumbo nucifera HOM05D003955 ORTHO05D004684 5.8e-247 857.8 563 79.4
arahy.Tifrunner.gnm1.ann1.I5E1T8 Arachis hypogaea HOM05D003955 ORTHO05D004684 1.7e-246 856.3 604 70.9
Lj5g0018825 Lotus japonicus HOM05D003955 ORTHO05D004684 3.8e-246 855.1 605 71.6
Os01g0125800 Oryza sativa ssp. japonica HOM05D003955 ORTHO05D004684 2.7e-244 849.0 608 69.1
VMungo0720G1874 Vigna mungo HOM05D003955 ORTHO05D004684 2.7e-244 849.0 608 71.4
TPR.G13862 Trifolium pratense HOM05D003955 ORTHO05D004684 2.3e-243 845.9 607 69.7
arahy.Tifrunner.gnm1.ann1.MW1RK6 Arachis hypogaea HOM05D003955 ORTHO05D004684 5.1e-243 844.7 617 69.2
Psat6g220280 Pisum sativum HOM05D003955 ORTHO05D004684 1.9e-242 842.8 604 70.5
Zm00001eb334960 Zea mays HOM05D003955 ORTHO05D004684 4.3e-242 841.6 608 68.8
Zm00001eb125700 Zea mays HOM05D003955 ORTHO05D004684 1.6e-241 839.7 608 68.9
Phvul.007G038100 Phaseolus vulgaris HOM05D003955 ORTHO05D004684 1.8e-240 836.3 608 70.4
EL10Ac6g14239 Beta vulgaris HOM05D003955 ORTHO05D004684 2.6e-239 832.4 597 70.5
Actinidia18907 Actinidia chinensis HOM05D003955 ORTHO05D004684 7.6e-239 830.9 604 72.5
Hund24990 Selenicereus undatus HOM05D003955 ORTHO05D004684 8.4e-238 827.4 677 62.2
Thhalv10000821m.g Eutrema salsugineum HOM05D003955 ORTHO05D004684 1.1e-234 817.0 607 71.8
AL5G10290 Arabidopsis lyrata HOM05D003955 ORTHO05D004684 1.9e-234 816.2 607 70.0
Carub.0005s0030 Capsella rubella HOM05D003955 ORTHO05D004684 3.3e-234 815.5 607 69.4
Sp2g12780 Schrenkiella parvula HOM05D003955 ORTHO05D004684 7.4e-234 814.3 607 70.7
CARHR143850 Cardamine hirsuta HOM05D003955 ORTHO05D004684 3.7e-233 812.0 607 69.7
THA.LOC104823875 Tarenaya hassleriana HOM05D003955 ORTHO05D004684 4.1e-232 808.5 607 69.0
Ah.03g138590 Amaranthus hybridus HOM05D003955 ORTHO05D004684 5.3e-232 808.1 602 68.6
BcaC04g21593 Brassica carinata HOM05D003955 ORTHO05D004684 4.5e-231 805.1 607 69.0
Aa31LG2G8590 Aethionema arabicum HOM05D003955 ORTHO05D004684 1.3e-230 803.5 639 65.7
C09p30050 Brassica napus HOM05D003955 ORTHO05D004684 3.8e-230 802.0 612 68.3
BolC9t55869H Brassica oleracea HOM05D003955 ORTHO05D004684 3.8e-230 802.0 612 68.3
BcaB07g30749 Brassica carinata HOM05D003955 ORTHO05D004684 8.5e-230 800.8 607 69.7
A09p23310 Brassica napus HOM05D003955 ORTHO05D004684 7.2e-229 797.7 612 68.0
BraA09t37932Z Brassica rapa HOM05D003955 ORTHO05D004684 1.6e-228 796.6 612 67.8
AT2G01330 Arabidopsis thaliana HOM05D003955 ORTHO05D004684 2.1e-228 796.2 607 68.7
Gohir.D01G099700 Gossypium hirsutum HOM05D003955 ORTHO05D004684 1.8e-224 783.1 524 74.4
Gohir.A01G153300 Gossypium hirsutum HOM05D003955 ORTHO05D004684 3.1e-224 782.3 524 74.2
Actinidia35113 Actinidia chinensis HOM05D003955 ORTHO05D004684 1.5e-202 710.3 414 88.2
Pp3c3_9960 Physcomitrium patens HOM05D003955 ORTHO05D004684 1.0e-198 697.6 609 58.8
TPR.G12969 Trifolium pratense HOM05D003955 ORTHO05D004684 2.0e-191 673.3 469 77.0
Hund20686 Selenicereus undatus HOM05D003955 ORTHO05D004684 3.3e-189 666.0 474 72.2
Cc04_g06570 Coffea canephora HOM05D003955 ORTHO05D004684 2.1e-188 663.3 393 85.8
Mapoly0025s0096 Marchantia polymorpha HOM05D003955 ORTHO05D004684 6.1e-188 661.8 610 53.3
AagrBONN_evm.TU.Sc2ySwM_340.157 Anthoceros agrestis HOM05D003955 ORTHO05D004684 1.3e-166 590.9 609 55.2
SMO298G0047 Selaginella moellendorffii HOM05D003955 ORTHO05D004684 1.2e-164 584.3 612 49.8
Thecc.02G279800 Theobroma cacao HOM05D003955 ORTHO05D004684 6.8e-163 578.6 424 71.7
HPP92_000152 Vanilla planifolia HOM05D003955 ORTHO05D004684 1.1e-152 544.7 480 60.0
Lalb_Chr06g0165551 Lupinus albus HOM05D003955 ORTHO05D004684 2.1e-148 530.4 424 67.0
BolC5t33521H Brassica oleracea HOM05D003955 ORTHO05D004684 2.8e-124 450.3 324 67.0
Oeu031790.1 Olea europaea HOM05D003955 ORTHO05D004684 4.6e-119 433.0 349 64.2
CBR_g51409 Chara braunii HOM05D003955 ORTHO05D004684 2.1e-111 407.5 483 51.8
SEGI_26510 Sequoiadendron giganteum HOM05D003955 ORTHO05D004684 2.5e-109 400.6 350 60.0
Atru.chr9.1765 Acer truncatum HOM05D003955 ORTHO05D004684 1.4e-107 394.8 278 70.1
MCO02G121 Micromonas commoda HOM05D003955 ORTHO05D004684 6.5e-97 359.4 640 36.1
Lalb_Chr06g0165541 Lupinus albus HOM05D003955 ORTHO05D004684 3.7e-92 343.6 185 85.9
PRCOL_00004882 Prasinoderma coloniale HOM05D003955 ORTHO05D004684 3.8e-89 333.6 613 39.5
Haze_27019 Corylus avellana HOM05D003955 ORTHO05D004684 1.8e-83 314.7 504 39.1
Cc04_g06580 Coffea canephora HOM05D003955 ORTHO05D004684 3.6e-79 300.4 217 73.3
Zm00001eb337090 Zea mays HOM05D003955 ORTHO05D004684 2.7e-66 257.7 166 81.3
Zm00001eb396840 Zea mays HOM05D003955 ORTHO05D004684 2.7e-66 257.7 166 80.7
Zm00001eb287030 Zea mays HOM05D003955 ORTHO05D004684 2.5e-64 251.1 164 81.1
Zm00001eb076360 Zea mays HOM05D003955 ORTHO05D004684 1.6e-63 248.4 164 80.5
Atru.chr9.1764 Acer truncatum HOM05D003955 ORTHO05D004684 1.0e-62 245.7 171 79.5
Hund20688 Selenicereus undatus HOM05D003955 ORTHO05D004684 3.2e-59 234.2 131 84.0
Ca_27465_v3 Cicer arietinum L. HOM05D003955 ORTHO05D004684 2.7e-58 231.1 131 84.0
TPR.G12747 Trifolium pratense HOM05D003955 ORTHO05D004684 7.3e-56 223.0 130 80.0
BcaC05g28709 Brassica carinata HOM05D003955 ORTHO05D004684 3.6e-55 220.7 128 79.7
Oeu031786.1 Olea europaea HOM05D003955 ORTHO05D004684 4.1e-51 207.2 131 79.4
BcaB03g13114 Brassica carinata HOM05D003955 ORTHO05D030800 1.5e-40 172.2 158 55.1
RcHm_v2.0_Chr5g0062751 Rosa chinensis HOM05D003955 ORTHO05D004684 1.1e-35 156.0 98 75.5
Zm00001eb221950 Zea mays HOM05D003955 ORTHO05D004684 1.9e-27 128.6 95 63.2
Atru.chr5.1031 Acer truncatum HOM05D003955 ORTHO05D030800 1.3e-23 115.9 76 71.1
Actinidia37891 Actinidia chinensis HOM05D003955 ORTHO05D030800 6.2e-23 113.6 196 38.8
Actinidia37893 Actinidia chinensis HOM05D003955 ORTHO05D004684 3.2e-19 101.3 53 88.7
Oeu013618.1 Olea europaea HOM05D003955 ORTHO05D004684 3.9e-17 94.4 105 52.4
Zm00001eb369430 Zea mays HOM05D003955 ORTHO05D004684 6.7e-17 93.6 54 75.9
BcaB07g32970 Brassica carinata HOM05D003955 ORTHO05D004684 2.5e-16 91.7 150 38.7
RcHm_v2.0_Chr6g0266701 Rosa chinensis HOM05D003955 ORTHO05D004684 6.2e-15 87.0 72 59.7
RcHm_v2.0_Chr6g0295791 Rosa chinensis HOM05D003955 ORTHO05D004684 3.1e-14 84.7 72 58.3
Zm00001eb265330 Zea mays HOM05D003955 ORTHO05D004684 1.9e-11 75.5 54 64.8
FvH4_5g16561 Fragaria vesca HOM05D020439 ORTHO05D035355 5.1e-09 67.4 49 57.1
ECA246G5178 Erigeron canadensis HOM05D002303 ORTHO05D007639 1.1e-08 66.2 210 28.6
MD03G1215900 Malus domestica HOM05D002303 ORTHO05D007639 1.1e-08 66.2 195 25.1
Aa31LG3G10470 Aethionema arabicum HOM05D002303 ORTHO05D007639 3.3e-08 64.7 189 23.8
Prupe.4G196900 Prunus persica HOM05D002303 ORTHO05D007639 4.3e-08 64.3 195 26.2
Carub.0008s1480 Capsella rubella HOM05D002303 ORTHO05D007639 1.1e-06 59.7 178 28.1
MSTRG.12188 Avicennia marina HOM05D000645 ORTHO05D000494 1.8e-06 58.9 214 26.2
TWI38G2363 Tripterygium wilfordii HOM05D002303 ORTHO05D007639 4.1e-06 57.8 195 24.6


User provided reference genes

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