Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 7.3e-289 996.5 497 100.0
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 2.3e-173 612.8 417 73.9
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 2.3e-165 586.3 477 65.0
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 2.9e-144 516.2 470 58.7
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 9.3e-143 511.1 470 59.1
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 3.5e-142 509.2 464 60.1
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 1.5e-140 503.8 451 58.5
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 1.9e-140 503.4 424 62.3
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 3.6e-139 499.2 463 57.7
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 1.7e-136 490.3 445 56.9
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 3.8e-136 489.2 457 59.1
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 1.1e-135 487.6 404 62.6
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 1.9e-135 486.9 473 56.4
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 2.5e-132 476.5 424 59.2
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 5.3e-130 468.8 445 58.0
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 4.5e-129 465.7 434 58.5
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 1.7e-128 463.8 485 54.0
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 1.9e-127 460.3 461 55.5
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.9e-127 460.3 474 54.9
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 8.2e-123 444.9 452 53.8
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 1.5e-121 440.7 441 54.6
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 1.5e-121 440.7 449 51.4
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 5.9e-121 438.7 444 54.1
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 1.1e-119 434.5 451 54.8
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 5.5e-119 432.2 464 52.6
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 2.1e-118 430.3 422 53.8
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 2.7e-118 429.9 451 51.4
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 2.3e-117 426.8 455 51.0
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 1.9e-116 423.7 467 52.5
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 7.4e-116 421.8 457 52.1
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 8.2e-115 418.3 457 49.9
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 8.2e-115 418.3 442 51.1
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 3.1e-114 416.4 349 63.3
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 6.9e-114 415.2 318 68.6
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 9.1e-114 414.8 422 52.4
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 3.4e-113 412.9 364 60.4
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 5.9e-113 412.1 450 48.9
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 2.9e-112 409.8 458 49.3
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 3.8e-112 409.5 472 48.1
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 5.0e-112 409.1 469 48.0
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 3.2e-111 406.4 451 50.1
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 4.2e-111 406.0 467 50.5
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 9.4e-111 404.8 463 49.9
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 1.2e-110 404.4 459 48.4
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 2.7e-110 403.3 455 49.0
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 4.6e-110 402.5 457 48.8
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 1.8e-109 400.6 457 48.6
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 3.0e-109 399.8 455 53.4
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 2.6e-108 396.7 448 47.1
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 3.3e-108 396.4 431 49.7
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 9.7e-108 394.8 423 52.5
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 8.2e-107 391.7 445 48.8
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 4.1e-106 389.4 466 47.0
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 5.3e-106 389.0 458 47.8
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 1.7e-104 384.0 329 60.8
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 2.9e-104 383.3 288 64.6
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 5.0e-104 382.5 455 46.4
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 5.0e-104 382.5 426 49.5
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 2.5e-103 380.2 352 58.5
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 4.2e-103 379.4 433 49.0
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 1.2e-102 377.9 419 50.8
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 8.8e-101 371.7 442 46.6
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 5.7e-100 369.0 439 49.9
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 4.8e-99 365.9 322 59.6
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 9.1e-98 361.7 383 53.5
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 1.7e-96 357.5 455 48.1
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 2.5e-95 353.6 458 46.1
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 9.7e-92 341.7 288 60.4
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 2.8e-91 340.1 329 55.3
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 4.1e-90 336.3 457 43.8
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 1.0e-85 321.6 495 41.2
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 4.4e-84 316.2 407 44.5
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 8.3e-83 312.0 451 42.1
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 5.4e-82 309.3 424 43.9
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 4.0e-77 293.1 436 42.0
Migut.E00617 Erythranthe guttata HOM05D006564 ORTHO05D007772 2.8e-75 287.0 241 58.1
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 2.8e-70 270.4 340 47.6
Lj3A1053G47 Lonicera japonica HOM05D006564 ORTHO05D007772 4.0e-69 266.5 188 68.6
Sopen06g024060 Solanum pennellii HOM05D006564 ORTHO05D007772 4.0e-69 266.5 259 56.0
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 3.5e-65 253.4 383 41.3
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 7.5e-60 235.7 194 62.4
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 2.7e-57 227.3 348 41.4
Glyma.02G035501 Glycine max HOM05D006564 ORTHO05D007772 6.2e-54 216.1 208 55.8
Nitab4.5_0003128g0060 Nicotiana tabacum HOM05D006564 ORTHO05D007772 6.2e-54 216.1 343 41.7
PGSC0003DMG401026086 Solanum tuberosum HOM05D006564 ORTHO05D007772 4.0e-53 213.4 316 44.6
Lj3A1053T43 Lonicera japonica HOM05D006564 ORTHO05D007772 3.2e-50 203.8 131 78.6
HanXRQChr12g0383581 Helianthus annuus HOM05D006564 ORTHO05D007772 8.6e-48 195.7 181 55.2
Zm00001eb227420 Zea mays HOM05D006564 ORTHO05D007772 1.6e-46 191.4 249 43.8
TAR374G1125 Trochodendron aralioides HOM05D006564 ORTHO05D007772 6.4e-43 179.5 214 50.9
RcHm_v2.0_Chr4g0443681 Rosa chinensis HOM05D006564 ORTHO05D007772 3.1e-37 160.6 134 62.7
Lalb_Chr05g0216811 Lupinus albus HOM05D006564 ORTHO05D007772 4.4e-36 156.8 125 61.6
ATR1091G047 Amborella trichopoda HOM05D006564 ORTHO05D007772 2.9e-35 154.1 177 48.0
FAN22G1362 Fragaria x ananassa HOM05D006564 ORTHO05D007772 2.9e-35 154.1 134 61.2
Actinidia01700 Actinidia chinensis HOM05D006564 ORTHO05D007772 1.6e-33 148.3 131 63.4
HPP92_021828 Vanilla planifolia HOM05D006564 ORTHO05D007772 6.6e-32 142.9 424 29.2
FAN12G0482 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.1e-31 142.1 108 67.6
Eucgr.H02586 Eucalyptus grandis HOM05D006564 ORTHO05D007772 6.9e-29 132.9 108 62.0
ClCG08G018020 Citrullus lanatus HOM05D006564 ORTHO05D007772 2.7e-25 120.9 127 51.2
CDE07G0681 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 4.6e-25 120.2 291 30.2
Cpa.g.sc69.59 Carica papaya HOM05D006564 ORTHO05D007772 9.6e-23 112.5 131 48.1
SHI17545 Sapria himalayana HOM05D006564 ORTHO05D007772 9.0e-21 105.9 107 49.5
AagrBONN_evm.TU.Sc2ySwM_362.2494 Anthoceros agrestis HOM05D006564 ORTHO05D007772 3.4e-20 104.0 385 26.0
Hund06002 Selenicereus undatus HOM05D006564 ORTHO05D007772 5.1e-16 90.1 99 47.5
Pp3c7_26620 Physcomitrium patens HOM05D006564 ORTHO05D007772 4.3e-15 87.0 429 22.1
SEGI_36736 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 7.4e-15 86.3 102 38.2
CDE06G0043 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 9.6e-15 85.9 89 53.9
SHI17558 Sapria himalayana HOM05D006564 ORTHO05D007772 1.3e-14 85.5 101 47.5
Os06g0708200 Oryza sativa ssp. japonica HOM05D006564 ORTHO05D007772 6.2e-14 83.2 109 45.0
Ca_03152_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 8.2e-14 82.8 71 54.9
Mapoly0088s0064 Marchantia polymorpha HOM05D006564 ORTHO05D007772 1.2e-12 79.0 365 22.5
CBR_g8804 Chara braunii HOM05D006564 ORTHO05D007772 1.3e-11 75.5 525 22.5
FvH4_4g34180 Fragaria vesca HOM05D006564 ORTHO05D007772 5.5e-10 70.1 134 38.8
Gohir.D06G182100 Gossypium hirsutum HOM05D006564 ORTHO05D007772 7.9e-09 66.2 62 54.8
SHI17547 Sapria himalayana HOM05D006564 ORTHO05D007772 2.3e-08 64.7 63 50.8
Ah.03g137970 Amaranthus hybridus HOM05D005085 ORTHO05D006135 1.1e-07 62.4 130 34.6


User provided reference genes

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