Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22813 Davidia involucrata HOM05D005088 ORTHO05D006914 1.2e-106 389.8 199 100.0
TAR371G0548 Trochodendron aralioides HOM05D005088 ORTHO05D006914 1.1e-91 340.1 198 85.9
Actinidia36135 Actinidia chinensis HOM05D005088 ORTHO05D006914 1.9e-91 339.3 197 85.8
GSVIVG01008659001 Vitis vinifera HOM05D005088 ORTHO05D006914 9.0e-89 330.5 198 83.3
CSS0015220 Camellia sinensis var. sinensis HOM05D005088 ORTHO05D006914 2.0e-88 329.3 194 85.6
vmacro05886 Vaccinium macrocarpon HOM05D005088 ORTHO05D006914 4.9e-87 324.7 194 84.0
Nn2g12382 Nelumbo nucifera HOM05D005088 ORTHO05D006914 7.1e-86 320.9 199 80.9
Atru.chr6.2443 Acer truncatum HOM05D005088 ORTHO05D006914 4.6e-85 318.2 204 82.4
RhsimUnG0087300 Rhododendron simsii HOM05D005088 ORTHO05D006914 1.8e-84 316.2 196 81.1
Ciclev10015979m.g Citrus clementina HOM05D005088 ORTHO05D006914 3.0e-84 315.5 202 79.2
ECA236G2300 Erigeron canadensis HOM05D005088 ORTHO05D006914 3.9e-84 315.1 198 77.3
RhsimUnG0006300 Rhododendron simsii HOM05D005088 ORTHO05D006914 5.1e-84 314.7 196 80.6
Manes.15G152700 Manihot esculenta HOM05D005088 ORTHO05D006914 1.5e-83 313.2 197 81.2
Lsat_1_v5_gn_7_9521 Lactuca sativa HOM05D005088 ORTHO05D006914 3.3e-83 312.0 199 77.4
TWI63G0383 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 4.3e-83 311.6 199 78.9
HanXRQChr04g0122711 Helianthus annuus HOM05D005088 ORTHO05D006914 1.3e-82 310.1 198 76.8
Solyc10g008130.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 1.6e-82 309.7 199 76.9
Sopen10g004000 Solanum pennellii HOM05D005088 ORTHO05D006914 1.6e-82 309.7 199 76.9
PGSC0003DMG400021851 Solanum tuberosum HOM05D005088 ORTHO05D006914 1.6e-82 309.7 199 76.9
Sopen01g054060 Solanum pennellii HOM05D005088 ORTHO05D006914 3.7e-82 308.5 199 77.4
CsaV3_5G026950 Cucumis sativus L. HOM05D005088 ORTHO05D006914 4.8e-82 308.1 199 78.4
PGSC0003DMG400010550 Solanum tuberosum HOM05D005088 ORTHO05D006914 1.8e-81 306.2 199 75.9
Sed0009164 Sechium edule HOM05D005088 ORTHO05D006914 2.4e-81 305.8 199 77.4
CiPaw.03G046700 Carya illinoinensis HOM05D005088 ORTHO05D006914 2.6e-80 302.4 199 76.4
Haze_14769 Corylus avellana HOM05D005088 ORTHO05D006914 3.4e-80 302.0 198 77.3
Actinidia05972 Actinidia chinensis HOM05D005088 ORTHO05D006914 1.0e-79 300.4 197 78.2
Nitab4.5_0006478g0030 Nicotiana tabacum HOM05D005088 ORTHO05D006914 1.0e-79 300.4 199 75.9
Peaxi162Scf00420g00135 Petunia axillaris HOM05D005088 ORTHO05D006914 2.2e-79 299.3 199 74.9
TWI73G1260 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 8.4e-79 297.4 199 75.4
ClCG09G019430 Citrullus lanatus HOM05D005088 ORTHO05D006914 1.1e-78 297.0 193 77.2
Migut.H00031 Erythranthe guttata HOM05D005088 ORTHO05D006914 5.5e-78 294.7 199 74.4
Nitab4.5_0001562g0080 Nicotiana tabacum HOM05D005088 ORTHO05D006914 5.5e-78 294.7 194 75.8
Oeu013966.1 Olea europaea HOM05D005088 ORTHO05D006914 9.3e-78 293.9 198 76.8
TAR629G0436 Trochodendron aralioides HOM05D005088 ORTHO05D006914 9.3e-78 293.9 197 77.2
QL02p073814 Quercus lobata HOM05D005088 ORTHO05D006914 1.0e-76 290.4 198 74.7
PGR142G2056 Punica granatum HOM05D005088 ORTHO05D006914 1.3e-76 290.0 199 72.9
Nitab4.5_0001357g0120 Nicotiana tabacum HOM05D005088 ORTHO05D006914 2.3e-76 289.3 193 75.1
Nitab4.5_0006683g0110 Nicotiana tabacum HOM05D005088 ORTHO05D006914 3.0e-76 288.9 193 75.1
Thecc.04G021300 Theobroma cacao HOM05D005088 ORTHO05D006914 3.9e-76 288.5 201 75.1
CDE02G1254 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 1.1e-75 287.0 199 72.9
MELO3C021598.2 Cucumis melo HOM05D005088 ORTHO05D006914 1.1e-75 287.0 192 76.6
Prupe.3G295300 Prunus persica HOM05D005088 ORTHO05D006914 1.9e-75 286.2 228 66.7
ATR1136G111 Amborella trichopoda HOM05D005088 ORTHO05D006914 3.3e-75 285.4 197 72.6
EL10Ac6g15396 Beta vulgaris HOM05D005088 ORTHO05D006914 4.3e-75 285.0 195 72.3
CANSAT64G2170 Cannabis sativa HOM05D005088 ORTHO05D006914 4.3e-75 285.0 200 74.0
Duzib147G1185 Durio zibethinus HOM05D005088 ORTHO05D006914 7.4e-75 284.3 201 75.1
Sc14g0003070 Simmondsia chinensis HOM05D005088 ORTHO05D006914 7.4e-75 284.3 192 75.0
THA.LOC104820717 Tarenaya hassleriana HOM05D005088 ORTHO05D006914 1.3e-74 283.5 199 71.4
PSO063G5784 Papaver somniferum HOM05D005088 ORTHO05D006914 2.8e-74 282.3 202 70.3
Gorai.001G266900 Gossypium raimondii HOM05D005088 ORTHO05D006914 2.4e-73 279.3 196 74.0
Gohir.D07G231700 Gossypium hirsutum HOM05D005088 ORTHO05D006914 3.1e-73 278.9 197 73.6
Gohir.A07G224400 Gossypium hirsutum HOM05D005088 ORTHO05D006914 4.1e-73 278.5 197 74.1
PSO754G0075 Papaver somniferum HOM05D005088 ORTHO05D006914 5.3e-73 278.1 202 69.3
CANSAT64G1390 Cannabis sativa HOM05D005088 ORTHO05D006914 6.9e-73 277.7 200 72.0
BcaC07g39962 Brassica carinata HOM05D005088 ORTHO05D006914 1.2e-72 276.9 199 67.8
BcaNung07365 Brassica carinata HOM05D005088 ORTHO05D006914 1.2e-72 276.9 199 67.8
Aqoxy5G03675 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 1.5e-72 276.6 194 71.1
BcaNung07083 Brassica carinata HOM05D005088 ORTHO05D006914 2.6e-72 275.8 199 67.8
Aqoxy7G00744 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 4.5e-72 275.0 194 70.6
Thhalv10006186m.g Eutrema salsugineum HOM05D005088 ORTHO05D006914 1.3e-71 273.5 199 68.3
CARHR166630 Cardamine hirsuta HOM05D005088 ORTHO05D006914 2.9e-71 272.3 199 67.8
VMungo0464G1582 Vigna mungo HOM05D005088 ORTHO05D006914 3.8e-71 271.9 199 68.3
DCAR_011267 Daucus carota HOM05D005088 ORTHO05D006914 6.5e-71 271.2 193 71.0
Glyma.05G115100 Glycine max HOM05D005088 ORTHO05D006914 6.5e-71 271.2 198 69.2
SEGI_26999 Sequoiadendron giganteum HOM05D005088 ORTHO05D006914 8.5e-71 270.8 199 66.8
Aa31LG2G11590 Aethionema arabicum HOM05D005088 ORTHO05D006914 1.1e-70 270.4 198 66.7
Carub.0005s2328 Capsella rubella HOM05D005088 ORTHO05D006914 1.1e-70 270.4 200 67.5
Glyma.19G052200 Glycine max HOM05D005088 ORTHO05D006914 1.1e-70 270.4 199 68.8
Potri.001G341300 Populus trichocarpa HOM05D005088 ORTHO05D006914 1.1e-70 270.4 206 70.4
arahy.Tifrunner.gnm1.ann1.NBA2EB Arachis hypogaea HOM05D005088 ORTHO05D006914 1.4e-70 270.0 199 69.3
A09p49430 Brassica napus HOM05D005088 ORTHO05D006914 2.5e-70 269.2 194 67.5
BraA09t40396Z Brassica rapa HOM05D005088 ORTHO05D006914 2.5e-70 269.2 194 67.5
MD17G1021200 Malus domestica HOM05D005088 ORTHO05D006914 4.2e-70 268.5 199 66.8
BolC8t50800H Brassica oleracea HOM05D005088 ORTHO05D006914 5.5e-70 268.1 194 67.0
Cpa.g.sc130.68 Carica papaya HOM05D005088 ORTHO05D006914 5.5e-70 268.1 160 82.5
SalBow8G2200 Salvia bowleyana HOM05D005088 ORTHO05D006914 5.5e-70 268.1 196 68.9
AL5G37860 Arabidopsis lyrata HOM05D005088 ORTHO05D006914 9.3e-70 267.3 199 66.3
MD09G1021000 Malus domestica HOM05D005088 ORTHO05D006914 4.6e-69 265.0 201 67.2
SalBow4G2808 Salvia bowleyana HOM05D005088 ORTHO05D006914 4.6e-69 265.0 196 67.9
AT3G56510 Arabidopsis thaliana HOM05D005088 ORTHO05D006914 6.1e-69 264.6 199 65.8
HPP92_010722 Vanilla planifolia HOM05D005088 ORTHO05D006914 6.1e-69 264.6 199 65.3
HPP92_010645 Vanilla planifolia HOM05D005088 ORTHO05D006914 1.3e-68 263.5 199 65.3
Ah.15g098720 Amaranthus hybridus HOM05D005088 ORTHO05D006914 3.0e-68 262.3 195 66.7
Cc00_g04470 Coffea canephora HOM05D005088 ORTHO05D006914 3.9e-68 261.9 142 91.5
Psat1g081640 Pisum sativum HOM05D005088 ORTHO05D006914 6.7e-68 261.2 199 66.8
Sabra16G0221300 Salix brachista HOM05D005088 ORTHO05D006914 6.7e-68 261.2 201 69.2
arahy.Tifrunner.gnm1.ann1.XI631Y Arachis hypogaea HOM05D005088 ORTHO05D006914 1.1e-67 260.4 191 68.6
Lj7A602T41 Lonicera japonica HOM05D005088 ORTHO05D006914 1.9e-67 259.6 146 87.7
Hma1.2p1_0587F.1_g183900 Hydrangea macrophylla HOM05D005088 ORTHO05D006914 2.5e-67 259.2 142 88.0
unitig_748.g6973 Utricularia gibba HOM05D005088 ORTHO05D006914 2.5e-67 259.2 197 67.5
RcHm_v2.0_Chr2g0173471 Rosa chinensis HOM05D005088 ORTHO05D006914 5.7e-67 258.1 200 66.0
Phvul.004G060300 Phaseolus vulgaris HOM05D005088 ORTHO05D006914 7.4e-67 257.7 199 65.8
Lalb_Chr06g0174471 Lupinus albus HOM05D005088 ORTHO05D006914 3.7e-66 255.4 199 64.3
C08p31790 Brassica napus HOM05D005088 ORTHO05D006914 6.3e-66 254.6 218 59.6
PSO210G5838 Papaver somniferum HOM05D005088 ORTHO05D006914 2.4e-65 252.7 202 61.4
Solyc01g112010.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 9.1e-65 250.8 165 76.4
FvH4_6g52000 Fragaria vesca HOM05D005088 ORTHO05D006914 1.2e-64 250.4 200 63.5
arahy.Tifrunner.gnm1.ann1.NQR6QW Arachis hypogaea HOM05D005088 ORTHO05D006914 2.0e-64 249.6 207 63.3
PSO210G1672 Papaver somniferum HOM05D005088 ORTHO05D006914 2.6e-64 249.2 202 61.4
FAN05G1017 Fragaria x ananassa HOM05D005088 ORTHO05D006914 2.2e-63 246.1 195 63.6
PGSC0003DMG400018652 Solanum tuberosum HOM05D005088 ORTHO05D006914 5.0e-63 245.0 171 72.5
FAN14G4588 Fragaria x ananassa HOM05D005088 ORTHO05D006914 1.1e-62 243.8 195 63.1
COL.COLO4_29189 Corchorus olitorius HOM05D005088 ORTHO05D006914 3.2e-62 242.3 170 74.7
FAN09G0922 Fragaria x ananassa HOM05D005088 ORTHO05D006914 3.2e-62 242.3 195 63.1
Lj4g0026117 Lotus japonicus HOM05D005088 ORTHO05D006914 4.2e-62 241.9 199 64.8
FAN02G1545 Fragaria x ananassa HOM05D005088 ORTHO05D006914 9.4e-62 240.7 195 62.6
Medtr6g021760 Medicago truncatula HOM05D005088 ORTHO05D006914 7.9e-61 237.7 195 62.1
Pp3c15_21890 Physcomitrium patens HOM05D005088 ORTHO05D006914 5.1e-60 235.0 209 57.9
CBR_g229 Chara braunii HOM05D005088 ORTHO05D006914 1.3e-58 230.3 209 54.5
SHI10481 Sapria himalayana HOM05D005088 ORTHO05D006914 2.8e-58 229.2 219 55.3
Mapoly0020s0128 Marchantia polymorpha HOM05D005088 ORTHO05D006914 9.1e-57 224.2 204 56.9
Ciclev10017686m.g Citrus clementina HOM05D005088 ORTHO05D006914 2.0e-56 223.0 147 76.9
Os07g0662600 Oryza sativa ssp. japonica HOM05D005088 ORTHO05D006914 5.9e-56 221.5 197 58.9
PSO782G2229 Papaver somniferum HOM05D005088 ORTHO05D006914 3.8e-55 218.8 204 59.3
Ca_04381_v3 Cicer arietinum L. HOM05D005088 ORTHO05D006914 8.5e-55 217.6 142 73.2
Psat5g064920 Pisum sativum HOM05D005088 ORTHO05D006914 8.5e-55 217.6 199 59.3
Zm00001eb110920 Zea mays HOM05D005088 ORTHO05D006914 8.5e-55 217.6 198 58.1
SMO347G0658 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 7.7e-48 194.5 171 57.9
AUR62029179 Chenopodium quinoa HOM05D005088 ORTHO05D006914 9.4e-46 187.6 118 75.4
TAR629G1146 Trochodendron aralioides HOM05D005088 ORTHO05D006914 3.6e-45 185.7 122 77.0
Cre06.g264500 Chlamydomonas reinhardtii HOM05D005088 ORTHO05D006914 3.0e-44 182.6 144 61.8
MCO13G391 Micromonas commoda HOM05D005088 ORTHO05D006914 5.9e-40 168.3 139 56.1
SpUn0233_0020 Schrenkiella parvula HOM05D005088 ORTHO05D006914 1.7e-34 150.2 136 56.6
BcaB02g08365 Brassica carinata HOM05D005088 ORTHO05D006914 1.2e-32 144.1 185 47.0
Sp5g06120 Schrenkiella parvula HOM05D005088 ORTHO05D006914 6.5e-31 138.3 205 42.9
CDE09G0918 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 4.0e-28 129.0 69 85.5
SGA_v2.0_scaffold18G08253 Striga asiatica HOM05D005088 ORTHO05D006914 2.6e-27 126.3 69 84.1
Sed0009105 Sechium edule HOM05D005088 ORTHO05D006914 4.4e-27 125.6 154 51.3
MD09G1021200 Malus domestica HOM05D005088 ORTHO05D006914 9.8e-27 124.4 104 62.5
PRCOL_00000286 Prasinoderma coloniale HOM05D005088 ORTHO05D006914 7.0e-25 118.2 161 41.6
DCAR_001396 Daucus carota HOM05D005088 ORTHO05D006914 8.6e-23 111.3 81 65.4
Oeu060752.1 Olea europaea HOM05D005088 ORTHO05D006914 1.1e-22 110.9 135 48.9
Cc02_g24380 Coffea canephora HOM05D005088 ORTHO05D006914 6.2e-13 78.6 57 66.7
SMO235G0038 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 8.9e-12 74.7 93 47.3
C04p35970 Brassica napus HOM05D005088 ORTHO05D017652 7.5e-11 71.6 170 32.4
BolC4t25202H Brassica oleracea HOM05D005088 ORTHO05D017652 7.5e-11 71.6 170 32.4
BcaC02g09844 Brassica carinata HOM05D005088 ORTHO05D017652 1.7e-10 70.5 171 31.6


User provided reference genes

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