Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 8.0e-269 929.9 476 100.0
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 1.9e-185 652.9 477 71.5
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 1.2e-179 633.6 476 70.2
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 4.7e-168 595.1 474 66.9
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 7.5e-150 534.6 471 61.1
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 1.4e-148 530.4 477 60.2
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 4.6e-147 525.4 478 58.4
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 5.9e-147 525.0 467 59.7
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 1.7e-146 523.5 487 58.9
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 4.3e-145 518.8 468 61.1
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 2.1e-144 516.5 466 60.1
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 2.1e-144 516.5 462 60.4
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 1.4e-143 513.8 467 57.8
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 1.8e-143 513.5 475 56.4
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 2.6e-142 509.6 474 57.6
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 9.8e-142 507.7 474 58.6
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 1.7e-141 506.9 471 57.7
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 3.7e-141 505.8 474 58.2
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 8.3e-141 504.6 468 58.5
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 5.4e-140 501.9 485 58.4
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 9.2e-140 501.1 474 57.6
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 1.0e-138 497.7 475 54.5
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 3.0e-138 496.1 482 57.1
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 3.9e-138 495.7 494 54.5
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 1.6e-136 490.3 473 55.6
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 2.0e-134 483.4 473 56.0
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 2.0e-134 483.4 473 57.3
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 2.6e-134 483.0 469 58.0
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 3.4e-134 482.6 459 57.7
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 2.2e-133 479.9 471 55.8
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 8.3e-133 478.0 481 55.1
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 1.2e-131 474.2 480 57.7
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 3.5e-131 472.6 469 56.9
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 4.6e-131 472.2 466 55.8
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 7.8e-131 471.5 483 54.5
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 1.0e-130 471.1 475 53.9
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 1.9e-129 466.8 415 60.7
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 4.3e-129 465.7 473 53.7
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 4.3e-129 465.7 477 53.5
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 2.1e-128 463.4 463 55.1
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 3.6e-128 462.6 470 53.2
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 4.0e-127 459.1 470 53.0
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 8.9e-127 458.0 473 53.9
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 4.4e-126 455.7 470 54.0
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 5.8e-126 455.3 471 55.4
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.7e-125 453.8 466 54.7
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 3.8e-125 452.6 476 51.7
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 2.1e-123 446.8 458 54.6
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 2.7e-123 446.4 482 51.5
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 1.0e-122 444.5 473 51.0
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 3.0e-122 443.0 443 53.7
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 1.5e-121 440.7 469 52.0
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.5e-121 439.9 459 54.0
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 7.3e-121 438.3 470 51.5
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 1.2e-120 437.6 474 51.3
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 2.1e-120 436.8 472 50.8
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 1.1e-119 434.5 448 53.3
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 1.8e-119 433.7 470 50.0
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 2.4e-119 433.3 477 52.0
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 2.6e-118 429.9 476 49.6
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 2.9e-117 426.4 339 65.8
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 4.9e-117 425.6 457 53.6
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 1.2e-115 421.0 445 52.8
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 1.3e-114 417.5 475 50.1
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 1.7e-114 417.2 416 53.1
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 1.1e-113 414.5 480 50.2
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 3.3e-113 412.9 469 49.9
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 3.3e-113 412.9 460 50.7
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 1.6e-112 410.6 466 50.9
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 9.0e-111 404.8 439 50.8
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 3.4e-110 402.9 469 49.0
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 3.4e-110 402.9 444 50.5
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 4.5e-110 402.5 466 46.8
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.1e-108 397.9 433 50.6
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 1.4e-108 397.5 469 48.0
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 2.4e-108 396.7 467 49.0
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 3.2e-108 396.4 469 48.0
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 4.2e-108 396.0 469 47.8
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 4.2e-108 396.0 473 49.9
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 7.1e-108 395.2 469 48.0
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.2e-107 394.4 469 47.8
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 2.3e-106 390.2 469 47.3
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 3.0e-106 389.8 469 48.0
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 1.5e-105 387.5 470 48.3
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 2.1e-104 383.6 469 46.7
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 4.8e-104 382.5 469 46.9
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 1.8e-103 380.6 494 45.3
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 2.4e-100 370.2 357 54.6
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 2.1e-99 367.1 468 44.9
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 8.2e-96 355.1 463 44.5
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 1.0e-93 348.2 302 62.6
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 1.7e-93 347.4 344 55.5
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 4.5e-86 322.8 461 41.4
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 3.2e-84 316.6 302 55.6
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 7.2e-84 315.5 482 41.3
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 4.6e-83 312.8 331 51.1
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 1.5e-81 307.8 465 41.3
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 4.8e-64 249.6 326 44.8
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 5.5e-60 236.1 182 64.8
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 5.3e-55 219.5 364 40.1
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 7.0e-39 166.0 153 52.3
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 7.3e-36 156.0 160 49.4
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 2.1e-35 154.5 228 42.5
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 6.1e-35 152.9 160 48.8
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 6.1e-35 152.9 160 48.8
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 1.5e-33 148.3 313 36.1
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.2e-27 128.6 115 54.8
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 8.9e-26 122.5 255 34.9
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.2e-25 122.1 127 52.0
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 1.3e-24 118.6 505 26.9
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 2.2e-24 117.9 89 70.8
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 6.4e-24 116.3 141 48.9
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 4.1e-23 113.6 163 35.6
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 4.1e-23 113.6 163 35.6
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 5.4e-23 113.2 430 26.5
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 3.3e-20 104.0 77 64.9
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 7.1e-15 86.3 123 38.2
Actinidia07619 Actinidia chinensis HOM05D006143 ORTHO05D007587 1.2e-14 85.5 181 38.1
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 3.9e-13 80.5 414 24.6
CSS0047646 Camellia sinensis var. sinensis HOM05D000493 ORTHO05D001638 9.5e-12 75.9 65 66.2
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 6.2e-11 73.2 458 22.1
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 1.1e-10 72.4 54 61.1
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 2.6e-09 67.8 134 30.6
arahy.Tifrunner.gnm1.ann1.SUI2IU Arachis hypogaea HOM05D006143 ORTHO05D007587 1.7e-08 65.1 59 50.8
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 3.2e-07 60.8 78 34.6
RcHm_v2.0_Chr3g0477111 Rosa chinensis HOM05D006143 ORTHO05D007587 7.8e-06 56.2 35 71.4


User provided reference genes

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