Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17141 Davidia involucrata HOM05D002725 ORTHO05D000007 8.2e-230 800.0 407 100.0
Dinv10247 Davidia involucrata HOM05D041706 ORTHO05D000006 4.4e-42 176.4 310 37.4
Dinv17507 Davidia involucrata HOM05D041706 ORTHO05D000006 2.5e-29 134.0 61 93.4
Dinv08200 Davidia involucrata HOM05D000003 ORTHO05D000007 2.1e-28 131.0 185 44.3
Dinv10132 Davidia involucrata HOM05D041706 ORTHO05D000006 1.8e-27 127.9 75 85.3
Dinv15043 Davidia involucrata HOM05D000024 ORTHO05D000006 2.7e-23 114.0 61 70.5
Dinv00381 Davidia involucrata HOM05D000003 ORTHO05D000007 6.0e-23 112.8 61 68.9
Dinv11868 Davidia involucrata HOM05D000003 ORTHO05D000007 7.9e-23 112.5 222 39.2
Dinv06321 Davidia involucrata HOM05D000097 ORTHO05D000041 2.5e-21 107.5 110 43.6
Dinv17303 Davidia involucrata HOM05D000003 ORTHO05D000007 4.3e-21 106.7 84 56.0
Dinv01133 Davidia involucrata HOM05D000003 ORTHO05D000007 9.0e-19 99.0 62 58.1
Dinv12308 Davidia involucrata HOM05D000003 ORTHO05D000007 9.0e-19 99.0 62 58.1
Dinv15432 Davidia involucrata HOM05D000003 ORTHO05D000006 1.5e-18 98.2 61 62.3
Dinv24871 Davidia involucrata HOM05D002725 ORTHO05D003279 3.4e-18 97.1 72 73.6
Dinv36312 Davidia involucrata HOM05D000024 ORTHO05D000006 4.5e-18 96.7 77 50.6
Dinv39770 Davidia involucrata HOM05D000003 ORTHO05D000007 4.5e-18 96.7 62 61.3
Dinv02104 Davidia involucrata HOM05D000003 ORTHO05D000006 1.0e-17 95.5 61 57.4
Actinidia01708 Actinidia chinensis HOM05D002725 ORTHO05D003279 6.5e-17 92.8 69 73.9
Dinv23891 Davidia involucrata HOM05D000003 ORTHO05D000006 2.5e-16 90.9 63 54.0
Haze_12164 Corylus avellana HOM05D002725 ORTHO05D003279 5.5e-16 89.7 69 69.6
Prupe.5G061600 Prunus persica HOM05D002725 ORTHO05D003279 5.5e-16 89.7 92 60.9
Dinv26733 Davidia involucrata HOM05D000003 ORTHO05D000006 7.1e-16 89.4 61 59.0
Prupe.6G220500 Prunus persica HOM05D002725 ORTHO05D003279 7.1e-16 89.4 69 69.6
Cc11_g14540 Coffea canephora HOM05D002725 ORTHO05D003279 9.3e-16 89.0 69 72.5
Thecc.02G244300 Theobroma cacao HOM05D002725 ORTHO05D003279 9.3e-16 89.0 69 71.0
Duzib268G0345 Durio zibethinus HOM05D002725 ORTHO05D003279 1.2e-15 88.6 69 69.6
Hma1.2p1_0867F.1_g230300 Hydrangea macrophylla HOM05D002725 ORTHO05D003279 1.2e-15 88.6 79 60.8
Dinv15314 Davidia involucrata HOM05D002725 ORTHO05D026724 2.1e-15 87.8 80 62.5
QL03p061701 Quercus lobata HOM05D002725 ORTHO05D003279 2.1e-15 87.8 69 69.6
Dinv36398 Davidia involucrata HOM05D000003 ORTHO05D000006 2.7e-15 87.4 163 33.7
Duzib106G0624 Durio zibethinus HOM05D002725 ORTHO05D003279 2.7e-15 87.4 69 68.1
SalBow2G2496 Salvia bowleyana HOM05D002725 ORTHO05D003279 2.7e-15 87.4 71 64.8
vmacro16261 Vaccinium macrocarpon HOM05D002725 ORTHO05D003279 2.7e-15 87.4 69 69.6
Manes.12G030200 Manihot esculenta HOM05D002725 ORTHO05D003279 3.5e-15 87.0 69 68.1
TWI75G1526 Tripterygium wilfordii HOM05D002725 ORTHO05D003279 3.5e-15 87.0 69 68.1
CSS0011985 Camellia sinensis var. sinensis HOM05D002725 ORTHO05D003279 4.6e-15 86.7 69 69.6
CSS0030976 Camellia sinensis var. sinensis HOM05D002725 ORTHO05D003279 4.6e-15 86.7 69 69.6
CiPaw.05G149700 Carya illinoinensis HOM05D002725 ORTHO05D003279 4.6e-15 86.7 69 68.1
Rhsim12G0121500 Rhododendron simsii HOM05D002725 ORTHO05D003279 7.9e-15 85.9 71 64.8
Manes.13G031300 Manihot esculenta HOM05D002725 ORTHO05D003279 1.0e-14 85.5 69 68.1
CiPaw.14G100600 Carya illinoinensis HOM05D002725 ORTHO05D003279 1.3e-14 85.1 69 66.7
AUR62005361 Chenopodium quinoa HOM05D002725 ORTHO05D003279 1.3e-14 85.1 69 63.8
MSTRG.7887 Avicennia marina HOM05D002725 ORTHO05D003279 1.8e-14 84.7 69 66.7
AUR62014016 Chenopodium quinoa HOM05D002725 ORTHO05D003279 1.8e-14 84.7 69 63.8
FAN19G1008 Fragaria x ananassa HOM05D002725 ORTHO05D003279 1.8e-14 84.7 76 61.8
MD02G1186000 Malus domestica HOM05D002725 ORTHO05D003279 1.8e-14 84.7 69 66.7
Potri.014G102800 Populus trichocarpa HOM05D002725 ORTHO05D003279 1.8e-14 84.7 69 66.7
FAN26G2216 Fragaria x ananassa HOM05D002725 ORTHO05D003279 2.3e-14 84.3 70 65.7
RcHm_v2.0_Chr2g0108041 Rosa chinensis HOM05D002725 ORTHO05D003279 2.3e-14 84.3 69 66.7
GSVIVG01020223001 Vitis vinifera HOM05D002725 ORTHO05D003279 2.3e-14 84.3 101 50.5
arahy.Tifrunner.gnm1.ann1.4NKX68 Arachis hypogaea HOM05D002725 ORTHO05D003279 3.0e-14 84.0 69 66.7
COL.COLO4_36975 Corchorus olitorius HOM05D002725 ORTHO05D003279 3.0e-14 84.0 69 68.1
Oeu001743.1 Olea europaea HOM05D002725 ORTHO05D003279 3.0e-14 84.0 69 69.6
Sabra02G0137700 Salix brachista HOM05D002725 ORTHO05D003279 3.9e-14 83.6 70 68.6
FvH4_1g17710 Fragaria vesca HOM05D002725 ORTHO05D003279 5.1e-14 83.2 69 66.7
FAN23G0685 Fragaria x ananassa HOM05D002725 ORTHO05D003279 5.1e-14 83.2 69 66.7
Lalb_Chr22g0360531 Lupinus albus HOM05D002725 ORTHO05D003279 5.1e-14 83.2 69 65.2
Ca_06608_v3 Cicer arietinum L. HOM05D002725 ORTHO05D003279 6.7e-14 82.8 69 63.8
Dinv01641 Davidia involucrata HOM05D000003 ORTHO05D000007 6.7e-14 82.8 77 48.1
Dinv15977 Davidia involucrata HOM05D000003 ORTHO05D000006 6.7e-14 82.8 60 51.7
Potri.002G176000 Populus trichocarpa HOM05D002725 ORTHO05D003279 6.7e-14 82.8 70 68.6
arahy.Tifrunner.gnm1.ann1.JTBU3D Arachis hypogaea HOM05D002725 ORTHO05D003279 8.7e-14 82.4 69 65.2
Migut.K01129 Erythranthe guttata HOM05D002725 ORTHO05D003279 8.7e-14 82.4 68 66.2
FAN28G0598 Fragaria x ananassa HOM05D002725 ORTHO05D003279 8.7e-14 82.4 69 66.7
Dinv10133 Davidia involucrata HOM05D000003 ORTHO05D000007 1.1e-13 82.0 46 87.0
MBI10_g36211_MAGBIO Magnolia biondii HOM05D002725 ORTHO05D003279 1.1e-13 82.0 69 65.2
Nn3g16917 Nelumbo nucifera HOM05D002725 ORTHO05D003279 1.1e-13 82.0 69 66.7
TAR371G0609 Trochodendron aralioides HOM05D002725 ORTHO05D003279 1.1e-13 82.0 68 67.6
MBI18_g25085_MAGBIO Magnolia biondii HOM05D002725 ORTHO05D003279 1.9e-13 81.3 71 63.4
CAN.G1178.23 Capsicum annuum HOM05D002725 ORTHO05D003279 3.3e-13 80.5 68 67.6
Dinv12307 Davidia involucrata HOM05D000535 ORTHO05D000006 3.3e-13 80.5 168 31.0
Eucgr.H02616 Eucalyptus grandis HOM05D002725 ORTHO05D003279 3.3e-13 80.5 69 65.2
PGR119G1015 Punica granatum HOM05D002725 ORTHO05D003279 3.3e-13 80.5 69 65.2
Medtr7g037560 Medicago truncatula HOM05D002725 ORTHO05D003279 4.3e-13 80.1 69 59.4
TPR.G9070 Trifolium pratense HOM05D002725 ORTHO05D003279 4.3e-13 80.1 69 62.3
Ca_25613_v3 Cicer arietinum L. HOM05D002725 ORTHO05D003279 5.7e-13 79.7 69 60.9
Lsat_1_v5_gn_1_10560 Lactuca sativa HOM05D002725 ORTHO05D003279 5.7e-13 79.7 69 62.3
PGSC0003DMG400004771 Solanum tuberosum HOM05D002725 ORTHO05D003279 5.7e-13 79.7 69 65.2
CANSAT56G0776 Cannabis sativa HOM05D002725 ORTHO05D003279 7.4e-13 79.3 70 60.0
Nitab4.5_0002289g0110 Nicotiana tabacum HOM05D002725 ORTHO05D003279 7.4e-13 79.3 71 62.0
Sopen08g026920 Solanum pennellii HOM05D002725 ORTHO05D003279 7.4e-13 79.3 69 63.8
Ah.02g129870 Amaranthus hybridus HOM05D002725 ORTHO05D003279 9.6e-13 79.0 69 63.8
Aqoxy3G02968 Aquilegia oxysepala HOM05D002725 ORTHO05D003279 9.6e-13 79.0 69 63.8
Peaxi162Scf00301g00128 Petunia axillaris HOM05D002725 ORTHO05D003279 9.6e-13 79.0 68 66.2
ATR0680G011 Amborella trichopoda HOM05D002725 ORTHO05D003279 1.3e-12 78.6 69 66.7
Psat3g161280 Pisum sativum HOM05D002725 ORTHO05D003279 1.3e-12 78.6 69 59.4
SGA_v2.0_scaffold36G14409 Striga asiatica HOM05D002725 ORTHO05D003279 1.6e-12 78.2 74 59.5
Sed0004453 Sechium edule HOM05D002725 ORTHO05D003279 2.1e-12 77.8 69 63.8
Sc14g0008580 Simmondsia chinensis HOM05D002725 ORTHO05D003279 2.1e-12 77.8 69 60.9
Solyc08g078430.4 Solanum lycopersicum HOM05D002725 ORTHO05D003279 2.1e-12 77.8 69 62.3
Dinv23975 Davidia involucrata HOM05D000024 ORTHO05D000006 3.7e-12 77.0 61 52.5
Hund25340 Selenicereus undatus HOM05D002725 ORTHO05D003279 3.7e-12 77.0 69 59.4
Dinv13157 Davidia involucrata HOM05D000003 ORTHO05D000006 4.8e-12 76.6 61 47.5
ClCG05G025230 Citrullus lanatus HOM05D002725 ORTHO05D003279 8.2e-12 75.9 69 63.8
Ciclev10031363m.g Citrus clementina HOM05D002725 ORTHO05D003279 1.4e-11 75.1 70 61.4
ECA233G4284 Erigeron canadensis HOM05D002725 ORTHO05D003279 1.4e-11 75.1 69 58.0
Dinv02967 Davidia involucrata HOM05D000003 ORTHO05D000006 1.8e-11 74.7 61 49.2
unitig_22.g6933 Utricularia gibba HOM05D002725 ORTHO05D003279 1.8e-11 74.7 68 58.8
EL10Ac6g13658 Beta vulgaris HOM05D002725 ORTHO05D003279 2.4e-11 74.3 80 52.5
HanXRQChr08g0234721 Helianthus annuus HOM05D002725 ORTHO05D003279 4.1e-11 73.6 69 59.4
A01p29130 Brassica napus HOM05D002725 ORTHO05D003279 5.3e-11 73.2 69 56.5
THA.LOC104816751 Tarenaya hassleriana HOM05D002725 ORTHO05D003279 5.3e-11 73.2 69 60.9
BolC1t03648H Brassica oleracea HOM05D002725 ORTHO05D003279 9.0e-11 72.4 69 58.0
CARHR292010 Cardamine hirsuta HOM05D002725 ORTHO05D003279 9.0e-11 72.4 69 60.9
Carub.0002s0508 Capsella rubella HOM05D002725 ORTHO05D003279 1.2e-10 72.0 69 58.0
CsaV3_5G031650 Cucumis sativus L. HOM05D002725 ORTHO05D003279 1.2e-10 72.0 69 62.3
Dinv18035 Davidia involucrata HOM05D000003 ORTHO05D000006 1.2e-10 72.0 146 30.8
Aa31LG2G10130 Aethionema arabicum HOM05D002725 ORTHO05D003279 2.0e-10 71.2 69 59.4
PSO832G2366 Papaver somniferum HOM05D002725 ORTHO05D003279 2.6e-10 70.9 69 58.0
Sp2g04490 Schrenkiella parvula HOM05D002725 ORTHO05D003279 3.4e-10 70.5 69 58.0
CDE11G0115 Ceratophyllum demersum HOM05D002725 ORTHO05D003279 4.5e-10 70.1 92 48.9
HPP92_018031 Vanilla planifolia HOM05D002725 ORTHO05D003279 4.5e-10 70.1 69 50.7
Dinv19394 Davidia involucrata HOM05D000243 ORTHO05D000007 7.6e-10 69.3 60 43.3
Os07g0141600 Oryza sativa ssp. japonica HOM05D002725 ORTHO05D003279 1.0e-09 68.9 69 56.5
DCAR_031095 Daucus carota HOM05D002725 ORTHO05D003279 1.3e-09 68.6 91 52.7
PSO782G3859 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-09 68.6 59 49.2
THA.LOC104812782 Tarenaya hassleriana HOM05D002725 ORTHO05D003279 1.3e-09 68.6 68 55.9
Dinv10916 Davidia involucrata HOM05D000003 ORTHO05D000006 1.7e-09 68.2 60 41.7
PSO541G4973 Papaver somniferum HOM05D000003 ORTHO05D000004 1.7e-09 68.2 59 49.2
Dinv15150 Davidia involucrata HOM05D000024 ORTHO05D000006 2.2e-09 67.8 57 49.1
Nitab4.5_0001381g0050 Nicotiana tabacum HOM05D002725 ORTHO05D003279 2.2e-09 67.8 61 62.3
Dinv17140 Davidia involucrata HOM05D000028 ORTHO05D181979 2.9e-09 67.4 37 89.2
PSO063G5148 Papaver somniferum HOM05D002725 ORTHO05D003279 2.9e-09 67.4 69 55.1
Dinv31288 Davidia involucrata HOM05D000003 ORTHO05D000006 6.5e-09 66.2 55 47.3
Dinv01322 Davidia involucrata HOM05D000003 ORTHO05D000007 1.1e-08 65.5 59 44.1
Dinv12857 Davidia involucrata HOM05D000003 ORTHO05D000006 1.1e-08 65.5 60 41.7
Dinv29992 Davidia involucrata HOM05D000024 ORTHO05D000006 1.4e-08 65.1 78 39.7
Zm00001eb074440 Zea mays HOM05D002725 ORTHO05D003279 1.4e-08 65.1 69 55.1
AL2G16480 Arabidopsis lyrata HOM05D002725 ORTHO05D003279 1.9e-08 64.7 71 54.9
Os04g0555400 Oryza sativa ssp. japonica HOM05D002725 ORTHO05D003279 1.9e-08 64.7 69 56.5
PSO541G2183 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-08 64.7 59 47.5
Aqoxy7G02314 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 3.2e-08 63.9 59 45.8
Dinv21537 Davidia involucrata HOM05D000003 ORTHO05D000006 4.2e-08 63.5 61 42.6
Dinv31250 Davidia involucrata HOM05D000003 ORTHO05D000006 4.2e-08 63.5 219 25.6
PSO170G0227 Papaver somniferum HOM05D000003 ORTHO05D000006 5.5e-08 63.2 57 50.9
arahy.Tifrunner.gnm1.ann1.D69TB6 Arachis hypogaea HOM05D002725 ORTHO05D003279 7.1e-08 62.8 68 55.9
arahy.Tifrunner.gnm1.ann1.LYET28 Arachis hypogaea HOM05D002725 ORTHO05D003279 7.1e-08 62.8 68 55.9
Rhsim01G0069200 Rhododendron simsii HOM05D000003 ORTHO05D000006 9.3e-08 62.4 96 40.6
AT1G60170 Arabidopsis thaliana HOM05D002725 ORTHO05D003279 1.6e-07 61.6 70 52.9
Dinv13282 Davidia involucrata HOM05D000003 ORTHO05D000006 1.6e-07 61.6 61 41.0
Gohir.A03G140600 Gossypium hirsutum HOM05D002725 ORTHO05D003279 1.6e-07 61.6 69 53.6
Gohir.D02G163400 Gossypium hirsutum HOM05D002725 ORTHO05D003279 1.6e-07 61.6 69 53.6
Gorai.005G183400 Gossypium raimondii HOM05D002725 ORTHO05D003279 1.6e-07 61.6 69 53.6
Aqoxy7G02651 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.1e-07 61.2 59 44.1
Dinv20814 Davidia involucrata HOM05D000003 ORTHO05D000006 2.1e-07 61.2 59 35.6
Dinv27597 Davidia involucrata HOM05D000212 ORTHO05D000006 2.1e-07 61.2 59 45.8
Thhalv10023432m.g Eutrema salsugineum HOM05D002725 ORTHO05D003279 2.1e-07 61.2 69 53.6
CSS0034921 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.7e-07 60.8 125 32.0
Aqoxy1G02446 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 3.5e-07 60.5 64 42.2
Lsat_1_v5_gn_8_158161 Lactuca sativa HOM05D002725 ORTHO05D003279 4.6e-07 60.1 69 47.8
Aqoxy6G02045 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.1e-07 59.7 56 42.9
Aqoxy2G01976 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 7.9e-07 59.3 65 43.1
Dinv02316 Davidia involucrata HOM05D000003 ORTHO05D000007 7.9e-07 59.3 204 27.9
Dinv04769 Davidia involucrata HOM05D000003 ORTHO05D000007 7.9e-07 59.3 77 35.1
Dinv10742 Davidia involucrata HOM05D000003 ORTHO05D000006 7.9e-07 59.3 46 47.8
MD15G1297200 Malus domestica HOM05D002725 ORTHO05D003279 7.9e-07 59.3 45 68.9
Dinv10248 Davidia involucrata HOM05D000003 ORTHO05D000007 1.0e-06 58.9 36 80.6
PSO478G1074 Papaver somniferum HOM05D000003 ORTHO05D000004 1.0e-06 58.9 56 46.4
Aqoxy1G03780 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-06 58.5 65 41.5
Aqoxy3G01797 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-06 58.5 149 28.2
AL8G22600 Arabidopsis lyrata HOM05D002725 ORTHO05D003279 1.3e-06 58.5 69 53.6
Dinv34972 Davidia involucrata HOM05D000003 ORTHO05D000007 1.3e-06 58.5 43 51.2
Aqoxy1G03910 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.8e-06 58.2 126 31.0
Dinv13083 Davidia involucrata HOM05D007604 ORTHO05D008966 1.8e-06 58.2 59 40.7
PSO063G2617 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-06 58.2 56 44.6
Aqoxy2G01321 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.3e-06 57.8 59 45.8
CSS0045782 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.3e-06 57.8 59 40.7
PSO675G9337 Papaver somniferum HOM05D000003 ORTHO05D000004 2.3e-06 57.8 59 40.7
Dinv27414 Davidia involucrata HOM05D000003 ORTHO05D000006 3.0e-06 57.4 107 25.2
PSO339G5630 Papaver somniferum HOM05D000003 ORTHO05D000006 3.0e-06 57.4 58 39.7
PSO384G2976 Papaver somniferum HOM05D000003 ORTHO05D000006 3.0e-06 57.4 119 33.6
Rhsim12G0100000 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.0e-06 57.4 61 47.5
Dinv23326 Davidia involucrata HOM05D000024 ORTHO05D000006 3.9e-06 57.0 95 30.5
PSO170G0886 Papaver somniferum HOM05D000003 ORTHO05D000006 3.9e-06 57.0 80 38.8
Aqoxy4G01935 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 5.1e-06 56.6 137 32.1
AL3G44040 Arabidopsis lyrata HOM05D002725 ORTHO05D003279 5.1e-06 56.6 70 50.0
EL10Ac6g13657 Beta vulgaris HOM05D002725 ORTHO05D003279 5.1e-06 56.6 70 47.1
Lj1g0003905 Lotus japonicus HOM05D002725 ORTHO05D003279 6.7e-06 56.2 69 49.3
Rhsim08G0102700 Rhododendron simsii HOM05D000003 ORTHO05D000006 6.7e-06 56.2 57 47.4
Duzib093G0655 Durio zibethinus HOM05D000003 ORTHO05D000006 8.7e-06 55.8 59 39.0
PSO173G0056 Papaver somniferum HOM05D000003 ORTHO05D000006 8.7e-06 55.8 56 42.9
vmacro10906 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 8.7e-06 55.8 56 41.1


User provided reference genes

Program Settings