Gene: AL8G22600
General Information
Structural Information
- Species Arabidopsis lyrata
- Gene Identifier AL8G22600
- Transcript Identifier AL8G22600.t1
- Gene Type Coding gene
- Location scaffold_8 : 12627871-12633585 : positive
Gene Family Information
- ID HOM05D002725
- #Genes/#Species 253/98
- Phylogenetic origin
- ID ORTHO05D003279
- #Genes/#Species 233/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id AL8G22600.v2.1
- pacid 35950874
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000244 | IEA | InterPro | spliceosomal tri-snRNP complex assembly | |
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome | |
| GO:0042026 | IEA | InterPro | protein refolding |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046540 | IEA | InterPro | U4/U6 x U5 tri-snRNP complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002687 | Nop domain |
| IPR042239 | Nop, C-terminal domain |
| IPR027105 | U4/U6 small nuclear ribonucleoprotein Prp31 |
| IPR027413 | GroEL-like equatorial domain superfamily |
| IPR019175 | Prp31 C-terminal |
| IPR036070 | Nop domain superfamily |
| IPR012976 | NOSIC |
| IPR001844 | Chaperonin Cpn60 |
| IPR002423 | Chaperonin Cpn60/TCP-1 family |
| Mapman id | Description |
|---|---|
| 16.2.1.3.3 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).protein factor (PRPF31) |