Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15230 Davidia involucrata HOM05D003157 ORTHO05D004447 0.0e+00 1302.0 707 100.0
TAR371G0612 Trochodendron aralioides HOM05D003157 ORTHO05D004447 8.3e-113 412.1 826 37.2
TAR629G0508 Trochodendron aralioides HOM05D003157 ORTHO05D004447 3.6e-108 396.7 830 35.8
Nn3g16701 Nelumbo nucifera HOM05D003157 ORTHO05D004447 3.1e-91 340.5 783 36.0
Dinv20600 Davidia involucrata HOM05D003157 ORTHO05D004447 3.7e-84 317.0 801 33.3
vmacro16645 Vaccinium macrocarpon HOM05D003157 ORTHO05D004447 1.3e-76 292.0 812 31.2
QL10p006899 Quercus lobata HOM05D003157 ORTHO05D004447 3.7e-76 290.4 819 33.1
Rhsim12G0167900 Rhododendron simsii HOM05D003157 ORTHO05D004447 6.2e-76 289.7 797 30.6
vmacro19300 Vaccinium macrocarpon HOM05D003157 ORTHO05D004447 8.2e-76 289.3 792 30.3
CSS0041144 Camellia sinensis var. sinensis HOM05D003157 ORTHO05D004447 1.1e-75 288.9 834 30.1
Nitab4.5_0001793g0010 Nicotiana tabacum HOM05D003157 ORTHO05D004447 3.8e-73 280.4 816 31.7
Nitab4.5_0010452g0010 Nicotiana tabacum HOM05D003157 ORTHO05D004447 3.8e-73 280.4 811 32.4
Peaxi162Scf00089g01334 Petunia axillaris HOM05D003157 ORTHO05D004447 3.8e-73 280.4 798 29.8
Ciclev10024152m.g Citrus clementina HOM05D003157 ORTHO05D004447 1.4e-72 278.5 837 30.8
Sabra12G0061600 Salix brachista HOM05D003157 ORTHO05D004447 3.5e-71 273.9 804 31.0
Nitab4.5_0000003g0820 Nicotiana tabacum HOM05D003157 ORTHO05D004447 7.9e-71 272.7 798 31.2
Manes.06G110100 Manihot esculenta HOM05D003157 ORTHO05D004447 1.3e-70 271.9 792 30.4
Potri.015G084000 Populus trichocarpa HOM05D003157 ORTHO05D004447 1.8e-70 271.6 788 29.7
PGSC0003DMG400018122 Solanum tuberosum HOM05D003157 ORTHO05D004447 8.7e-70 269.2 800 32.4
Manes.14G060700 Manihot esculenta HOM05D003157 ORTHO05D004447 1.1e-69 268.9 794 31.4
Cfa019214 Carpinus fangiana HOM05D003157 ORTHO05D004447 5.7e-69 266.5 839 29.3
Nitab4.5_0008713g0020 Nicotiana tabacum HOM05D003157 ORTHO05D004447 7.4e-69 266.2 798 29.7
Actinidia08960 Actinidia chinensis HOM05D003157 ORTHO05D004447 2.2e-68 264.6 800 28.8
CAN.G338.32 Capsicum annuum HOM05D003157 ORTHO05D004447 3.7e-68 263.8 818 32.8
TWI14G1342 Tripterygium wilfordii HOM05D003157 ORTHO05D004447 3.7e-68 263.8 816 30.1
Sopen03g031330 Solanum pennellii HOM05D003157 ORTHO05D004447 4.8e-68 263.5 810 32.6
Solyc03g112230.4 Solanum lycopersicum HOM05D003157 ORTHO05D004447 8.2e-68 262.7 809 32.1
Gohir.D11G043500 Gossypium hirsutum HOM05D003157 ORTHO05D004447 1.8e-67 261.5 787 29.9
Potri.012G085700 Populus trichocarpa HOM05D003157 ORTHO05D004447 1.8e-67 261.5 805 30.2
Gohir.A03G056900 Gossypium hirsutum HOM05D003157 ORTHO05D004447 1.2e-66 258.8 832 29.7
Gorai.007G046900 Gossypium raimondii HOM05D003157 ORTHO05D004447 2.6e-66 257.7 799 29.9
CiPaw.11G019800 Carya illinoinensis HOM05D003157 ORTHO05D004447 4.5e-66 256.9 758 30.9
Gohir.A11G040300 Gossypium hirsutum HOM05D003157 ORTHO05D004447 5.9e-66 256.5 804 30.2
Gorai.003G115800 Gossypium raimondii HOM05D003157 ORTHO05D004447 7.7e-66 256.1 824 29.2
Rhsim08G0177500 Rhododendron simsii HOM05D003157 ORTHO05D004447 1.7e-65 255.0 795 28.9
SalBow6G1229 Salvia bowleyana HOM05D003157 ORTHO05D004447 1.7e-65 255.0 847 28.7
Dinv38527 Davidia involucrata HOM05D003157 ORTHO05D004447 3.8e-65 253.8 411 38.4
Prupe.5G165800 Prunus persica HOM05D003157 ORTHO05D004447 8.5e-65 252.7 794 29.3
Sabra15G0107200 Salix brachista HOM05D003157 ORTHO05D004447 8.5e-65 252.7 786 30.4
MSTRG.9691 Avicennia marina HOM05D003157 ORTHO05D004447 2.5e-64 251.1 802 29.3
MSTRG.11494 Avicennia marina HOM05D003157 ORTHO05D004447 5.5e-64 250.0 846 28.8
DCAR_021588 Daucus carota HOM05D003157 ORTHO05D004447 7.2e-64 249.6 758 29.8
Oeu040857.2 Olea europaea HOM05D003157 ORTHO05D004447 7.2e-64 249.6 808 29.3
Sopen06g028060 Solanum pennellii HOM05D003157 ORTHO05D004447 7.2e-64 249.6 780 30.0
Gohir.D03G106700 Gossypium hirsutum HOM05D003157 ORTHO05D004447 1.6e-63 248.4 824 29.2
PGSC0003DMG400027073 Solanum tuberosum HOM05D003157 ORTHO05D004447 2.1e-63 248.1 769 30.0
Cc04_g11550 Coffea canephora HOM05D003157 ORTHO05D004447 3.6e-63 247.3 811 28.9
Haze_07584 Corylus avellana HOM05D003157 ORTHO05D004447 4.6e-63 246.9 838 29.2
Migut.D01995 Erythranthe guttata HOM05D003157 ORTHO05D004447 4.6e-63 246.9 809 28.9
Solyc06g071770.4 Solanum lycopersicum HOM05D003157 ORTHO05D004447 4.6e-63 246.9 781 29.6
Lj5A130T68 Lonicera japonica HOM05D003157 ORTHO05D004447 1.0e-62 245.7 772 28.8
Oeu020884.3 Olea europaea HOM05D003157 ORTHO05D004447 1.0e-62 245.7 817 29.6
CAN.G993.20 Capsicum annuum HOM05D003157 ORTHO05D004447 8.8e-62 242.7 760 28.3
Thecc.03G025700 Theobroma cacao HOM05D003157 ORTHO05D004447 4.3e-61 240.4 918 27.7
Lj9A442T64 Lonicera japonica HOM05D003157 ORTHO05D004447 1.3e-60 238.8 799 28.8
RcHm_v2.0_Chr7g0192591 Rosa chinensis HOM05D003157 ORTHO05D004447 2.2e-60 238.0 812 28.7
Peaxi162Scf00763g00430 Petunia axillaris HOM05D003157 ORTHO05D004447 3.7e-60 237.3 790 27.6
PSO754G0123 Papaver somniferum HOM05D003157 ORTHO05D004447 1.4e-59 235.3 778 30.1
GSVIVG01007647001 Vitis vinifera HOM05D003157 ORTHO05D004447 2.4e-59 234.6 788 30.6
Ca_14277_v3 Cicer arietinum L. HOM05D003157 ORTHO05D004447 6.9e-59 233.0 844 29.0
PSO111G0086 Papaver somniferum HOM05D003157 ORTHO05D004447 9.1e-59 232.6 783 30.8
Os02g0593700 Oryza sativa ssp. japonica HOM05D003157 ORTHO05D004447 1.2e-58 232.3 803 27.3
TWI23G0818 Tripterygium wilfordii HOM05D003157 ORTHO05D004447 2.0e-58 231.5 846 28.0
BolC8t48585H Brassica oleracea HOM05D003157 ORTHO05D004447 3.4e-58 230.7 790 29.0
Sc12g0005010 Simmondsia chinensis HOM05D003157 ORTHO05D004447 4.5e-58 230.3 827 28.2
Aqoxy3G01217 Aquilegia oxysepala HOM05D003157 ORTHO05D004447 5.9e-58 229.9 829 28.3
BcaC07g38161 Brassica carinata HOM05D003157 ORTHO05D004447 5.9e-58 229.9 791 28.7
Medtr4g104880 Medicago truncatula HOM05D003157 ORTHO05D004447 1.3e-57 228.8 881 26.8
MD06G1165900 Malus domestica HOM05D003157 ORTHO05D004447 1.7e-57 228.4 817 27.8
HanXRQChr10g0296081 Helianthus annuus HOM05D003157 ORTHO05D004447 2.2e-57 228.0 826 29.2
VMungo1215G0567 Vigna mungo HOM05D003157 ORTHO05D004447 2.9e-57 227.6 828 26.9
EL10Ac5g10658 Beta vulgaris HOM05D003157 ORTHO05D004447 5.0e-57 226.9 838 27.3
Glyma.17G084700 Glycine max HOM05D003157 ORTHO05D004447 8.5e-57 226.1 817 27.9
Glyma.05G041600 Glycine max HOM05D003157 ORTHO05D004447 1.9e-56 224.9 821 28.7
BraA01t01537Z Brassica rapa HOM05D003157 ORTHO05D004447 2.5e-56 224.6 392 36.5
BcaC09g50840 Brassica carinata HOM05D003157 ORTHO05D004447 3.2e-56 224.2 401 36.2
CARHR232070 Cardamine hirsuta HOM05D003157 ORTHO05D004447 4.2e-56 223.8 398 36.4
Eucgr.K02800 Eucalyptus grandis HOM05D003157 ORTHO05D004447 5.5e-56 223.4 908 27.4
BraA08t34089Z Brassica rapa HOM05D003157 ORTHO05D004447 7.2e-56 223.0 785 28.9
MD14G1171800 Malus domestica HOM05D003157 ORTHO05D004447 1.2e-55 222.2 818 27.5
Sed0005003 Sechium edule HOM05D003157 ORTHO05D004447 1.2e-55 222.2 797 27.5
AL7G28510 Arabidopsis lyrata HOM05D003157 ORTHO05D004447 2.1e-55 221.5 791 28.1
A08p21390 Brassica napus HOM05D003157 ORTHO05D004447 3.6e-55 220.7 788 28.2
TPR.G37494 Trifolium pratense HOM05D003157 ORTHO05D004447 1.0e-54 219.2 910 25.8
C01p20020 Brassica napus HOM05D003157 ORTHO05D004447 1.8e-54 218.4 403 35.5
AT4G24690 Arabidopsis thaliana HOM05D003157 ORTHO05D004447 2.3e-54 218.0 791 27.3
FAN18G2672 Fragaria x ananassa HOM05D003157 ORTHO05D004447 2.3e-54 218.0 815 28.0
Zm00001eb245950 Zea mays HOM05D003157 ORTHO05D004447 3.0e-54 217.6 774 28.6
FvH4_5g06270 Fragaria vesca HOM05D003157 ORTHO05D004447 6.7e-54 216.5 825 27.8
arahy.Tifrunner.gnm1.ann1.UDW2C6 Arachis hypogaea HOM05D003157 ORTHO05D004447 1.1e-53 215.7 916 26.3
A01p16030 Brassica napus HOM05D003157 ORTHO05D004447 1.1e-53 215.7 398 36.4
Psat4g060880 Pisum sativum HOM05D003157 ORTHO05D004447 1.1e-53 215.7 861 29.0
Carub.0007s1637 Capsella rubella HOM05D003157 ORTHO05D004447 1.5e-53 215.3 392 36.5
BolC1t01929H Brassica oleracea HOM05D003157 ORTHO05D004447 3.3e-53 214.2 429 33.6
HanXRQChr16g0504701 Helianthus annuus HOM05D003157 ORTHO05D004447 3.3e-53 214.2 829 31.6
Aa31LG4G9790 Aethionema arabicum HOM05D003157 ORTHO05D004447 4.4e-53 213.8 776 27.7
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 4.4e-53 213.8 393 37.4
AUR62008147 Chenopodium quinoa HOM05D003157 ORTHO05D004447 5.7e-53 213.4 821 27.6
COL.COLO4_24272 Corchorus olitorius HOM05D003157 ORTHO05D004447 9.7e-53 212.6 571 32.0
DCAR_026172 Daucus carota HOM05D003157 ORTHO05D004447 9.7e-53 212.6 778 29.4
Sp7g22680 Schrenkiella parvula HOM05D003157 ORTHO05D004447 9.7e-53 212.6 802 26.3
arahy.Tifrunner.gnm1.ann1.RZMV9E Arachis hypogaea HOM05D003157 ORTHO05D004447 1.3e-52 212.2 918 25.9
FAN04G1965 Fragaria x ananassa HOM05D003157 ORTHO05D004447 1.7e-52 211.8 816 27.9
FAN13G0746 Fragaria x ananassa HOM05D003157 ORTHO05D004447 4.8e-52 210.3 827 28.1
Lsat_1_v5_gn_4_77240 Lactuca sativa HOM05D003157 ORTHO05D004447 8.2e-52 209.5 827 27.6
THA.LOC104825177 Tarenaya hassleriana HOM05D003157 ORTHO05D004447 3.1e-51 207.6 396 35.6
BcaC06g32868 Brassica carinata HOM05D003157 ORTHO05D004447 5.3e-51 206.8 417 34.8
PGR044G1972 Punica granatum HOM05D003157 ORTHO05D004447 7.0e-51 206.5 815 28.0
AUR62028729 Chenopodium quinoa HOM05D003157 ORTHO05D004447 9.1e-51 206.1 824 26.9
C07p53750 Brassica napus HOM05D003157 ORTHO05D004447 1.2e-50 205.7 896 26.5
FAN08G1011 Fragaria x ananassa HOM05D003157 ORTHO05D004447 1.2e-50 205.7 827 27.7
Lj4g0014353 Lotus japonicus HOM05D003157 ORTHO05D004447 2.0e-50 204.9 394 34.8
Phvul.003G205000 Phaseolus vulgaris HOM05D003157 ORTHO05D004447 2.6e-50 204.5 855 28.0
BolC7t45866H Brassica oleracea HOM05D003157 ORTHO05D004447 3.5e-50 204.1 399 35.6
COL.COLO4_36761 Corchorus olitorius HOM05D003157 ORTHO05D004447 1.7e-49 201.8 867 26.4
A03p55470 Brassica napus HOM05D003157 ORTHO05D004447 2.2e-49 201.4 395 35.2
DCAR_016024 Daucus carota HOM05D003157 ORTHO05D004447 2.2e-49 201.4 388 35.1
THA.LOC104809775 Tarenaya hassleriana HOM05D003157 ORTHO05D004447 2.9e-49 201.1 792 27.8
Lalb_Chr13g0297581 Lupinus albus HOM05D003157 ORTHO05D004447 8.5e-49 199.5 848 28.4
BraA03t14620Z Brassica rapa HOM05D003157 ORTHO05D004447 2.5e-48 198.0 403 35.2
Lalb_Chr07g0182971 Lupinus albus HOM05D003157 ORTHO05D004447 4.2e-48 197.2 781 30.0
CDE02G1794 Ceratophyllum demersum HOM05D003157 ORTHO05D004447 2.7e-47 194.5 824 26.7
Actinidia24597 Actinidia chinensis HOM05D003157 ORTHO05D004447 1.0e-46 192.6 571 29.4
Actinidia08033 Actinidia chinensis HOM05D000048 ORTHO05D004447 1.8e-46 191.8 569 29.3
ECA232G3241 Erigeron canadensis HOM05D003157 ORTHO05D004447 6.7e-46 189.9 672 28.3
unitig_37.g12746 Utricularia gibba HOM05D003157 ORTHO05D004447 1.5e-45 188.7 794 25.9
ClCG03G002990 Citrullus lanatus HOM05D003157 ORTHO05D004447 5.7e-45 186.8 812 25.7
SGA_v2.0_scaffold114G31812 Striga asiatica HOM05D003157 ORTHO05D004447 5.7e-45 186.8 818 26.5
Sed0026079 Sechium edule HOM05D003157 ORTHO05D004447 2.2e-44 184.9 795 25.5
Atru.chr9.2575 Acer truncatum HOM05D003157 ORTHO05D004447 1.2e-42 179.1 278 38.8
MELO3C002297.2 Cucumis melo HOM05D003157 ORTHO05D004447 3.5e-42 177.6 832 25.5
CDE04G2303 Ceratophyllum demersum HOM05D003157 ORTHO05D004447 4.5e-42 177.2 840 25.1
ATR0824G119 Amborella trichopoda HOM05D003157 ORTHO05D004447 5.9e-42 176.8 796 26.6
Thhalv10024557m.g Eutrema salsugineum HOM05D003157 ORTHO05D004447 5.9e-42 176.8 204 44.6
CANSAT80G2678 Cannabis sativa HOM05D003157 ORTHO05D004447 1.0e-41 176.0 889 24.1
Hund02785 Selenicereus undatus HOM05D003157 ORTHO05D004447 1.0e-41 176.0 594 29.0
HPP92_024706 Vanilla planifolia HOM05D003157 ORTHO05D004447 3.8e-41 174.1 406 32.0
Ah.11g051160 Amaranthus hybridus HOM05D003157 ORTHO05D004447 1.1e-40 172.6 822 26.0
CsaV3_1G008830 Cucumis sativus L. HOM05D003157 ORTHO05D004447 1.1e-40 172.6 822 25.7
Potri.012G085450 Populus trichocarpa HOM05D003157 ORTHO05D004447 1.9e-40 171.8 250 40.8
ClCG01G013500 Citrullus lanatus HOM05D003157 ORTHO05D004447 4.2e-40 170.6 804 24.9
SHI17273 Sapria himalayana HOM05D003157 ORTHO05D004447 1.2e-39 169.1 597 26.6
SGA_v2.0_scaffold7G04161 Striga asiatica HOM05D003157 ORTHO05D004447 3.0e-38 164.5 785 25.7
Os04g0476800 Oryza sativa ssp. japonica HOM05D003157 ORTHO05D004447 8.8e-38 162.9 841 27.0
HPP92_006279 Vanilla planifolia HOM05D003157 ORTHO05D004447 4.1e-35 154.1 354 32.8
SEGI_11452 Sequoiadendron giganteum HOM05D003157 ORTHO05D004447 2.9e-33 147.9 430 29.3
Lalb_Chr12g0201891 Lupinus albus HOM05D003157 ORTHO05D004447 3.6e-31 141.0 600 27.5
Oeu023452.2 Olea europaea HOM05D003157 ORTHO05D004447 1.5e-29 135.6 354 32.2
Ca_03503_v3 Cicer arietinum L. HOM05D003157 ORTHO05D004447 9.1e-27 126.3 204 41.2
Pp3c7_8990 Physcomitrium patens HOM05D003157 ORTHO05D004447 4.0e-22 110.9 442 24.7
AagrBONN_evm.TU.Sc2ySwM_228.5109 Anthoceros agrestis HOM05D003157 ORTHO05D004447 5.7e-21 107.1 239 31.8
Pp3c11_16970 Physcomitrium patens HOM05D003157 ORTHO05D004447 5.4e-19 100.5 460 23.0
CBR_g19475 Chara braunii HOM05D003157 ORTHO05D004447 7.0e-19 100.1 207 33.8
Mapoly0100s0042 Marchantia polymorpha HOM05D003157 ORTHO05D004447 7.0e-19 100.1 221 28.5
Zm00001eb079700 Zea mays HOM05D003157 ORTHO05D004447 1.1e-16 92.8 331 28.1
Atru.chr9.2574 Acer truncatum HOM05D003157 ORTHO05D004447 1.8e-14 85.5 134 44.0
MBI18_g17021_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.8e-14 85.5 142 42.3
Migut.K00603 Erythranthe guttata HOM05D003157 ORTHO05D004447 3.4e-13 81.3 113 38.1
Psat7g241120 Pisum sativum HOM05D002716 ORTHO05D003324 5.8e-13 80.5 150 35.3
Mapoly0039s0051 Marchantia polymorpha HOM05D003157 ORTHO05D004447 2.2e-12 78.6 454 22.0
MBI19_g29861_MAGBIO Magnolia biondii HOM05D003157 ORTHO05D004447 3.7e-12 77.8 122 45.1
Migut.O00156 Erythranthe guttata HOM05D003157 ORTHO05D004447 1.9e-11 75.5 158 28.5
SGA_v2.0_scaffold25G10800 Striga asiatica HOM05D003157 ORTHO05D004447 1.9e-11 75.5 67 47.8
Migut.O00157 Erythranthe guttata HOM05D003157 ORTHO05D004447 2.0e-10 72.0 67 43.3
Cpa.g.sc159.27 Carica papaya HOM05D003157 ORTHO05D004447 7.8e-10 70.1 103 44.7
CBR_g3746 Chara braunii HOM05D000019 ORTHO05D000002 7.8e-10 70.1 83 36.1
Aqoxy3G02978 Aquilegia oxysepala HOM05D003157 ORTHO05D004447 2.3e-09 68.6 67 44.8
SMO132G0003 Selaginella moellendorffii HOM05D003157 ORTHO05D004447 5.0e-09 67.4 231 27.7
Prupe.5G165900 Prunus persica HOM05D003157 ORTHO05D012168 8.6e-09 66.6 68 55.9
Atru.chr9.2576 Acer truncatum HOM05D003157 ORTHO05D004447 1.9e-08 65.5 42 66.7
THA.LOC104815519 Tarenaya hassleriana HOM05D003157 ORTHO05D004447 3.3e-08 64.7 182 30.8
Lsat_1_v5_gn_8_1421 Lactuca sativa HOM05D003157 ORTHO05D012168 5.6e-08 63.9 183 32.8
CBR_g29958 Chara braunii HOM05D006040 ORTHO05D007134 7.3e-08 63.5 86 38.4
Lsat_1_v5_gn_8_131800 Lactuca sativa HOM05D003157 ORTHO05D004447 9.5e-08 63.2 216 28.7
ECA232G1718 Erigeron canadensis HOM05D003157 ORTHO05D012168 2.8e-07 61.6 61 54.1
MD06G1166000 Malus domestica HOM05D003157 ORTHO05D012168 3.6e-07 61.2 93 41.9
Mapoly0039s0050 Marchantia polymorpha HOM05D003157 ORTHO05D004447 3.6e-07 61.2 61 41.0
Aqoxy3G03011 Aquilegia oxysepala HOM05D003157 ORTHO05D012168 2.3e-06 58.5 281 27.4
FAN08G3352 Fragaria x ananassa HOM05D003157 ORTHO05D012168 3.1e-06 58.2 69 47.8
CiPaw.11G020300 Carya illinoinensis HOM05D003157 ORTHO05D012168 4.0e-06 57.8 64 48.4
Rhsim10G0016700 Rhododendron simsii HOM05D001812 ORTHO05D001874 4.0e-06 57.8 54 53.7
TAR622G1022 Trochodendron aralioides HOM05D003157 ORTHO05D004447 5.2e-06 57.4 117 38.5
Zm00001eb127620 Zea mays HOM05D003157 ORTHO05D037866 5.2e-06 57.4 52 57.7
Lsat_1_v5_gn_1_27780 Lactuca sativa HOM05D003157 ORTHO05D004447 6.8e-06 57.0 67 49.3


User provided reference genes

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