Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 6.2e-191 670.6 339 100.0
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 2.1e-170 602.4 339 90.3
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 1.0e-164 583.6 321 90.7
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 1.7e-164 582.8 339 86.1
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 2.1e-162 575.9 338 87.0
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 1.4e-161 573.2 339 85.0
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 8.8e-161 570.5 339 84.7
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 1.5e-160 569.7 328 87.8
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 4.4e-160 568.2 320 88.8
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 1.7e-159 566.2 329 87.5
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 1.1e-158 563.5 327 86.9
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 1.8e-158 562.8 340 84.1
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 1.8e-158 562.8 340 84.1
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 3.1e-158 562.0 336 84.5
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 5.3e-158 561.2 327 85.6
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 2.6e-157 558.9 311 89.4
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 4.5e-157 558.1 320 88.8
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 1.3e-156 556.6 317 88.3
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 2.2e-156 555.8 318 87.1
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 2.9e-156 555.4 309 90.6
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 2.9e-156 555.4 344 82.0
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 3.8e-156 555.1 342 82.7
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 8.5e-156 553.9 320 87.2
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 2.5e-155 552.4 307 89.3
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 3.2e-155 552.0 339 83.8
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 5.5e-155 551.2 331 82.8
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 1.2e-154 550.1 316 86.7
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 3.6e-154 548.5 317 87.7
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 3.6e-154 548.5 319 86.8
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 4.7e-154 548.1 321 86.9
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 4.7e-154 548.1 320 86.6
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 1.4e-153 546.6 317 86.4
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 1.4e-153 546.6 316 86.7
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 1.4e-153 546.6 339 82.9
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 3.0e-153 545.4 310 88.1
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 5.2e-153 544.7 343 81.6
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 6.7e-153 544.3 361 80.3
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 1.2e-152 543.5 317 86.8
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 2.6e-152 542.3 311 86.8
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 3.3e-152 542.0 317 86.4
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 4.4e-152 541.6 325 84.9
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 5.7e-152 541.2 309 86.4
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 7.5e-152 540.8 309 86.4
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 7.5e-152 540.8 307 87.3
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 9.7e-152 540.4 308 86.7
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 1.3e-151 540.0 307 86.3
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 1.3e-151 540.0 316 86.1
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 2.2e-151 539.3 330 83.3
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 3.7e-151 538.5 314 86.0
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 8.2e-151 537.3 310 86.5
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 8.2e-151 537.3 310 86.5
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 3.1e-150 535.4 310 86.8
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 7.0e-150 534.3 310 86.5
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 7.0e-150 534.3 310 86.5
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 1.6e-149 533.1 317 84.5
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 2.0e-149 532.7 319 84.0
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 7.7e-149 530.8 295 91.5
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 1.3e-148 530.0 310 85.8
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 1.7e-148 529.6 310 86.1
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 5.0e-148 528.1 336 80.4
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 4.2e-147 525.0 329 81.8
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 4.0e-145 518.5 323 80.8
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.5e-144 516.5 373 72.9
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 2.6e-144 515.8 325 81.2
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 5.7e-144 514.6 310 83.2
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 6.3e-143 511.1 331 79.8
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 9.1e-142 507.3 317 81.7
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 9.1e-142 507.3 317 81.7
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 2.9e-140 502.3 304 82.9
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 9.5e-139 497.3 305 80.3
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 4.7e-138 495.0 354 75.1
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 1.0e-137 493.8 307 78.8
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 1.8e-137 493.0 333 76.9
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 1.8e-137 493.0 344 75.6
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 7.5e-136 487.6 362 69.1
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 2.4e-134 482.6 307 80.8
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 7.0e-134 481.1 499 56.5
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 1.2e-133 480.3 311 79.4
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 1.7e-132 476.5 317 76.3
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 1.2e-130 470.3 337 73.6
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.8e-130 469.2 316 77.8
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 1.0e-129 467.2 309 77.0
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 1.8e-129 466.5 317 74.8
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 2.4e-126 456.1 419 60.9
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 3.2e-126 455.7 289 80.6
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 9.2e-126 454.1 259 87.3
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 2.0e-125 453.0 309 78.3
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 6.6e-124 448.0 329 74.8
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 1.2e-120 437.2 308 71.4
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 2.6e-120 436.0 284 80.6
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 2.2e-119 433.0 306 71.6
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 5.4e-118 428.3 252 84.1
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 2.3e-116 422.9 331 65.6
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 3.0e-116 422.5 240 87.9
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 5.0e-116 421.8 259 81.1
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 8.6e-116 421.0 307 71.7
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 1.5e-115 420.2 273 77.7
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 9.5e-115 417.5 306 67.3
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 1.5e-107 393.7 296 65.2
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 4.0e-105 385.6 255 76.5
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 6.4e-103 378.3 219 85.8
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 3.2e-102 375.9 262 69.8
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 2.7e-101 372.9 244 77.9
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.3e-100 370.5 339 59.9
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 2.9e-95 352.8 220 79.1
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 1.9e-94 350.1 228 74.1
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 1.4e-89 334.0 307 60.3
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 9.9e-88 327.8 299 55.9
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 3.8e-79 299.3 177 83.1
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 6.4e-79 298.5 184 81.0
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 2.3e-76 290.0 225 69.8
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 2.4e-73 280.0 304 51.0
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 1.1e-70 271.2 158 84.8
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.1e-67 261.2 488 37.5
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 2.8e-66 256.5 176 71.0
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 3.4e-64 249.6 157 80.9
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 3.0e-60 236.5 144 83.3
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 2.5e-59 233.4 120 92.5
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 2.8e-58 229.9 120 91.7
Hund16202 Selenicereus undatus HOM05D005540 ORTHO05D006932 1.7e-50 204.1 228 52.6
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 2.6e-48 196.8 113 85.0
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 2.2e-42 177.2 270 37.0
Nn3g18202 Nelumbo nucifera HOM05D005540 ORTHO05D006932 2.6e-40 170.2 99 83.8
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 2.7e-32 143.7 287 32.8
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 2.1e-29 134.0 66 95.5
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 3.7e-26 123.2 221 32.1
MELO3C031731.2 Cucumis melo HOM05D005540 ORTHO05D006932 9.1e-25 118.6 63 87.3
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 1.2e-24 118.2 64 90.6
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 1.6e-24 117.9 83 75.9
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.0e-24 117.5 58 98.3
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 1.3e-23 114.8 56 98.2
MELO3C020384.2 Cucumis melo HOM05D005540 ORTHO05D006932 2.9e-23 113.6 70 74.3
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 2.6e-19 100.5 77 71.4
arahy.Tifrunner.gnm1.ann1.XYVL4V Arachis hypogaea HOM05D005540 ORTHO05D023714 5.2e-12 76.3 43 83.7
SEGI_04261 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 2.6e-11 73.9 46 78.3
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 2.2e-10 70.9 33 93.9
SHI09501 Sapria himalayana HOM05D005540 ORTHO05D006932 3.5e-08 63.5 55 60.0
PGR042G3208 Punica granatum HOM05D005536 ORTHO05D006999 1.9e-06 57.8 110 33.6
AL1G36500 Arabidopsis lyrata HOM05D005536 ORTHO05D006999 7.3e-06 55.8 90 36.7
AT1G22940 Arabidopsis thaliana HOM05D005536 ORTHO05D006999 7.3e-06 55.8 90 35.6
unitig_748.g8492 Utricularia gibba HOM05D005540 ORTHO05D425961 7.3e-06 55.8 105 39.0
Duzib132G1177 Durio zibethinus HOM05D005536 ORTHO05D006999 9.5e-06 55.5 102 33.3
SHI09489 Sapria himalayana HOM05D005540 ORTHO05D364180 9.5e-06 55.5 31 83.9


User provided reference genes

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