Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14826 Davidia involucrata HOM05D005856 ORTHO05D007264 1.6e-222 775.8 394 100.0
Manes.13G018400 Manihot esculenta HOM05D005856 ORTHO05D007264 4.2e-154 548.5 379 76.8
QL03p053723 Quercus lobata HOM05D005856 ORTHO05D007264 3.0e-152 542.3 387 74.4
CSS0025471 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 6.6e-152 541.2 391 73.4
Lj3A1066G66 Lonicera japonica HOM05D005856 ORTHO05D007264 5.6e-151 538.1 387 73.1
Duzib248G0543 Durio zibethinus HOM05D005856 ORTHO05D007264 9.6e-151 537.3 375 74.1
CiPaw.05G111700 Carya illinoinensis HOM05D005856 ORTHO05D007264 1.3e-150 537.0 386 75.1
ClCG08G010110 Citrullus lanatus HOM05D005856 ORTHO05D007264 3.6e-150 535.4 371 75.2
arahy.Tifrunner.gnm1.ann1.E9QWSH Arachis hypogaea HOM05D005856 ORTHO05D007264 2.4e-149 532.7 405 70.9
Peaxi162Scf00128g01130 Petunia axillaris HOM05D005856 ORTHO05D007264 2.4e-149 532.7 406 69.7
CsaV3_6G032280 Cucumis sativus L. HOM05D005856 ORTHO05D007264 4.0e-149 531.9 370 75.4
Actinidia20701 Actinidia chinensis HOM05D005856 ORTHO05D007264 9.0e-149 530.8 371 75.2
CSS0003803 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 1.2e-148 530.4 431 67.1
COL.COLO4_20381 Corchorus olitorius HOM05D005856 ORTHO05D007264 2.0e-148 529.6 386 71.8
Glyma.18G007700 Glycine max HOM05D005856 ORTHO05D007264 2.0e-148 529.6 368 75.3
GSVIVG01010446001 Vitis vinifera HOM05D005856 ORTHO05D007264 4.5e-148 528.5 375 75.7
Nitab4.5_0000379g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 5.8e-148 528.1 376 74.5
Nitab4.5_0000367g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 9.9e-148 527.3 376 74.2
Thecc.02G210800 Theobroma cacao HOM05D005856 ORTHO05D007264 9.9e-148 527.3 375 73.9
Atru.chr11.2307 Acer truncatum HOM05D005856 ORTHO05D007264 2.2e-147 526.2 372 75.3
MELO3C011452.2 Cucumis melo HOM05D005856 ORTHO05D007264 8.4e-147 524.2 370 74.3
Rhsim12G0099000 Rhododendron simsii HOM05D005856 ORTHO05D007264 1.1e-146 523.9 371 74.1
Gohir.A04G139000 Gossypium hirsutum HOM05D005856 ORTHO05D007264 1.4e-146 523.5 376 73.1
Sopen05g010580 Solanum pennellii HOM05D005856 ORTHO05D007264 1.9e-146 523.1 403 69.7
Solyc05g015310.3 Solanum lycopersicum HOM05D005856 ORTHO05D007264 9.3e-146 520.8 403 69.5
Prupe.1G228400 Prunus persica HOM05D005856 ORTHO05D007264 1.6e-145 520.0 415 69.4
Sed0007662 Sechium edule HOM05D005856 ORTHO05D007264 2.7e-145 519.2 371 74.4
Potri.006G025300 Populus trichocarpa HOM05D005856 ORTHO05D007264 3.5e-145 518.8 414 66.7
Lj3g0022861 Lotus japonicus HOM05D005856 ORTHO05D007264 4.6e-145 518.5 368 73.4
arahy.Tifrunner.gnm1.ann1.ID6EX5 Arachis hypogaea HOM05D005856 ORTHO05D007264 1.8e-144 516.5 405 68.6
CAN.G43.18 Capsicum annuum HOM05D005856 ORTHO05D007264 3.0e-144 515.8 403 69.0
Ciclev10031347m.g Citrus clementina HOM05D005856 ORTHO05D007264 3.0e-144 515.8 374 73.5
Eucgr.H04651 Eucalyptus grandis HOM05D005856 ORTHO05D007264 3.9e-144 515.4 378 73.0
Oeu036879.1 Olea europaea HOM05D005856 ORTHO05D007264 6.7e-144 514.6 375 72.3
Gorai.012G175300 Gossypium raimondii HOM05D005856 ORTHO05D007264 1.1e-143 513.8 391 70.1
PGR119G1218 Punica granatum HOM05D005856 ORTHO05D007264 1.5e-143 513.5 375 72.0
Cfa009330 Carpinus fangiana HOM05D005856 ORTHO05D007264 3.3e-143 512.3 375 73.6
Glyma.11G249500 Glycine max HOM05D005856 ORTHO05D007264 4.8e-142 508.4 362 74.3
TAR622G1129 Trochodendron aralioides HOM05D005856 ORTHO05D007264 4.8e-142 508.4 357 76.2
DCAR_031194 Daucus carota HOM05D005856 ORTHO05D007264 8.1e-142 507.7 372 72.3
SalBow1G2377 Salvia bowleyana HOM05D005856 ORTHO05D007264 8.1e-142 507.7 370 71.9
Medtr3g085550 Medicago truncatula HOM05D005856 ORTHO05D007264 9.0e-141 504.2 374 70.3
PGSC0003DMG400015053 Solanum tuberosum HOM05D005856 ORTHO05D007264 3.4e-140 502.3 370 71.9
Sp5g22410 Schrenkiella parvula HOM05D005856 ORTHO05D007264 7.6e-140 501.1 416 65.4
AL2G26010 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 9.9e-140 500.7 415 66.3
TPR.G28278 Trifolium pratense HOM05D005856 ORTHO05D007264 2.9e-139 499.2 368 70.9
Lalb_Chr11g0075741 Lupinus albus HOM05D005856 ORTHO05D007264 4.9e-139 498.4 369 71.3
Sabra06G0018600 Salix brachista HOM05D005856 ORTHO05D007264 6.4e-139 498.0 448 61.6
Thhalv10019531m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 1.1e-138 497.3 413 65.6
THA.LOC104807593 Tarenaya hassleriana HOM05D005856 ORTHO05D007264 1.1e-138 497.3 372 71.8
Aqoxy5G03410 Aquilegia oxysepala HOM05D005856 ORTHO05D007264 1.4e-138 496.9 365 71.0
Potri.016G023500 Populus trichocarpa HOM05D005856 ORTHO05D007264 1.4e-138 496.9 428 62.9
BcaB03g15198 Brassica carinata HOM05D005856 ORTHO05D007264 2.4e-138 496.1 414 65.2
MD13G1117100 Malus domestica HOM05D005856 ORTHO05D007264 2.4e-138 496.1 418 67.5
A07p34000 Brassica napus HOM05D005856 ORTHO05D007264 4.2e-138 495.4 368 70.4
BraA07t31027Z Brassica rapa HOM05D005856 ORTHO05D007264 4.2e-138 495.4 368 70.4
CANSAT01G0688 Cannabis sativa HOM05D005856 ORTHO05D007264 7.1e-138 494.6 372 71.0
Aa31sc1092G20 Aethionema arabicum HOM05D005856 ORTHO05D007264 9.3e-138 494.2 371 71.2
ECA233G1277 Erigeron canadensis HOM05D005856 ORTHO05D007264 9.3e-138 494.2 428 64.0
BcaC08g46160 Brassica carinata HOM05D005856 ORTHO05D007264 1.2e-137 493.8 368 70.4
CARHR059980 Cardamine hirsuta HOM05D005856 ORTHO05D007264 1.2e-137 493.8 414 63.8
SGA_v2.0_scaffold135G34936 Striga asiatica HOM05D005856 ORTHO05D007264 1.8e-136 490.0 373 70.2
Psat5g095080 Pisum sativum HOM05D005856 ORTHO05D007264 2.3e-136 489.6 367 70.0
EL10Ac6g13483 Beta vulgaris HOM05D005856 ORTHO05D007264 6.7e-136 488.0 369 70.2
Carub.0002s1377 Capsella rubella HOM05D005856 ORTHO05D007264 1.5e-135 486.9 415 64.1
Haze_12395 Corylus avellana HOM05D005856 ORTHO05D007264 1.9e-135 486.5 365 72.1
AT1G67440 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 3.3e-135 485.7 415 64.6
Sc04g0010050 Simmondsia chinensis HOM05D005856 ORTHO05D007264 4.3e-135 485.3 382 68.3
ATR0561G073 Amborella trichopoda HOM05D005856 ORTHO05D007264 1.3e-134 483.8 365 70.1
Cpa.g.sc351.3 Carica papaya HOM05D005856 ORTHO05D007264 2.8e-134 482.6 357 71.7
FAN07G1943 Fragaria x ananassa HOM05D005856 ORTHO05D007264 4.0e-133 478.8 354 72.6
FvH4_4g23940 Fragaria vesca HOM05D005856 ORTHO05D007264 3.4e-132 475.7 354 72.3
FAN17G0012 Fragaria x ananassa HOM05D005856 ORTHO05D007264 4.5e-132 475.3 354 72.0
TWI36G0309 Tripterygium wilfordii HOM05D005856 ORTHO05D007264 4.5e-132 475.3 401 65.6
Phvul.001G260800 Phaseolus vulgaris HOM05D005856 ORTHO05D007264 7.6e-132 474.6 368 68.5
VMungo1383G1560 Vigna mungo HOM05D005856 ORTHO05D007264 1.0e-131 474.2 367 68.1
FAN22G0691 Fragaria x ananassa HOM05D005856 ORTHO05D007264 2.9e-131 472.6 354 71.8
Gohir.D04G181900 Gossypium hirsutum HOM05D005856 ORTHO05D007264 3.8e-131 472.2 343 72.0
unitig_88.g27631 Utricularia gibba HOM05D005856 ORTHO05D007264 4.6e-129 465.3 395 63.0
Hund06082 Selenicereus undatus HOM05D005856 ORTHO05D007264 7.9e-129 464.5 385 65.7
RcHm_v2.0_Chr4g0430601 Rosa chinensis HOM05D005856 ORTHO05D007264 1.5e-127 460.3 342 72.8
AUR62024126 Chenopodium quinoa HOM05D005856 ORTHO05D007264 4.8e-126 455.3 439 59.2
Lsat_1_v5_gn_8_149340 Lactuca sativa HOM05D005856 ORTHO05D007264 1.1e-125 454.1 380 64.7
Nn4g22353 Nelumbo nucifera HOM05D005856 ORTHO05D007264 5.3e-125 451.8 309 77.0
C06p42840 Brassica napus HOM05D005856 ORTHO05D007264 1.2e-124 450.7 349 68.5
BolC6t39153H Brassica oleracea HOM05D005856 ORTHO05D007264 1.5e-124 450.3 349 68.5
PSO782G2456 Papaver somniferum HOM05D005856 ORTHO05D007264 1.5e-124 450.3 377 65.3
Migut.H00051 Erythranthe guttata HOM05D005856 ORTHO05D007264 1.7e-123 446.8 412 61.2
AUR62005603 Chenopodium quinoa HOM05D005856 ORTHO05D007264 3.2e-122 442.6 436 58.7
CDE05G3252 Ceratophyllum demersum HOM05D005856 ORTHO05D007264 3.0e-120 436.0 345 67.8
HanXRQChr08g0207721 Helianthus annuus HOM05D005856 ORTHO05D007264 3.0e-120 436.0 372 64.0
Os04g0381600 Oryza sativa ssp. japonica HOM05D005856 ORTHO05D007264 6.3e-118 428.3 358 63.4
SEGI_12163 Sequoiadendron giganteum HOM05D005856 ORTHO05D007264 9.1e-117 424.5 354 63.8
Cc11_g00900 Coffea canephora HOM05D005856 ORTHO05D007264 5.7e-111 405.2 306 69.9
HPP92_024239 Vanilla planifolia HOM05D005856 ORTHO05D007264 7.4e-111 404.8 364 59.6
Actinidia26816 Actinidia chinensis HOM05D005856 ORTHO05D007264 5.3e-109 398.7 241 83.8
Sp5g22430 Schrenkiella parvula HOM05D005856 ORTHO05D007264 9.4e-106 387.9 359 58.5
Manes.12G012850 Manihot esculenta HOM05D005856 ORTHO05D007264 6.7e-104 381.7 309 67.3
PSO063G1304 Papaver somniferum HOM05D005856 ORTHO05D007264 4.1e-101 372.5 363 59.8
AL2G26030 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 4.5e-100 369.0 355 56.3
Thhalv10019423m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 1.1e-98 364.4 338 58.9
Zm00001eb420890 Zea mays HOM05D005856 ORTHO05D007264 6.1e-97 358.6 302 62.6
Pp3c14_19540 Physcomitrium patens HOM05D005856 ORTHO05D007264 1.5e-90 337.4 354 52.5
Ca_16469_v3 Cicer arietinum L. HOM05D005856 ORTHO05D007264 9.8e-87 324.7 247 68.0
Mapoly0076s0016 Marchantia polymorpha HOM05D005856 ORTHO05D007264 3.1e-85 319.7 372 51.6
FAN12G0203 Fragaria x ananassa HOM05D005856 ORTHO05D007264 1.6e-84 317.4 230 72.6
CBR_g49528 Chara braunii HOM05D005856 ORTHO05D007264 3.5e-84 316.2 395 46.3
SMO236G0063 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 4.5e-84 315.8 358 51.1
AagrBONN_evm.TU.Sc2ySwM_344.2476 Anthoceros agrestis HOM05D005856 ORTHO05D007264 8.6e-83 311.6 360 49.7
HPP92_013615 Vanilla planifolia HOM05D005856 ORTHO05D007264 9.5e-82 308.1 269 62.5
CARHR068030 Cardamine hirsuta HOM05D005856 ORTHO05D007264 4.3e-74 282.7 349 49.6
Carub.0002s1379 Capsella rubella HOM05D005856 ORTHO05D007264 9.5e-66 255.0 355 43.9
Ah.03g136240 Amaranthus hybridus HOM05D005856 ORTHO05D007264 4.0e-64 249.6 278 54.3
MCO13G068 Micromonas commoda HOM05D005856 ORTHO05D007264 2.4e-61 240.4 320 46.2
AUR62005602 Chenopodium quinoa HOM05D005856 ORTHO05D007264 6.0e-60 235.7 332 46.1
PRCOL_00004669 Prasinoderma coloniale HOM05D005856 ORTHO05D007264 1.2e-52 211.5 410 36.3
AT1G67460 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 5.3e-40 169.5 178 53.9
ECA240G4225 Erigeron canadensis HOM05D005856 ORTHO05D007264 2.6e-39 167.2 213 51.2
Cre10.g436600 Chlamydomonas reinhardtii HOM05D005856 ORTHO05D007264 2.2e-38 164.1 497 29.4
Cfa005743 Carpinus fangiana HOM05D005856 ORTHO05D007264 9.3e-37 158.7 134 66.4
Medtr3g085580 Medicago truncatula HOM05D005856 ORTHO05D007264 3.5e-36 156.8 190 51.1
Haze_12396 Corylus avellana HOM05D005856 ORTHO05D007264 1.6e-33 147.9 128 63.3
MD07G1133300 Malus domestica HOM05D005856 ORTHO05D007264 1.6e-33 147.9 94 77.7
Dinv17562 Davidia involucrata HOM05D005856 ORTHO05D015634 4.3e-26 123.2 122 54.1
Rhsim10G0039300 Rhododendron simsii HOM05D005856 ORTHO05D007264 8.2e-17 92.4 63 79.4
SMO199G0052 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 3.4e-15 87.0 169 37.3
AL2G26330 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 4.5e-15 86.7 67 59.7
SalBow4G2969 Salvia bowleyana HOM05D005856 ORTHO05D015634 4.3e-10 70.1 62 56.5
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 7.4e-10 69.3 234 27.8
SMO199G0090 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 6.3e-09 66.2 66 54.5
SMO199G0068 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 2.4e-08 64.3 91 45.1
Psat5g095160 Pisum sativum HOM05D001167 ORTHO05D036681 3.4e-07 60.5 73 49.3
VMungo0464G1347 Vigna mungo HOM05D005856 ORTHO05D007264 1.0e-06 58.9 40 70.0


User provided reference genes

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