Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13659 Davidia involucrata HOM05D005810 ORTHO05D007279 4.6e-166 587.8 291 100.0
Rhsim05G0160900 Rhododendron simsii HOM05D005810 ORTHO05D007279 1.6e-126 456.4 312 73.4
CSS0013071 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 1.7e-120 436.4 322 70.8
COL.COLO4_15299 Corchorus olitorius HOM05D005810 ORTHO05D007279 6.5e-120 434.5 311 69.1
GSVIVG01021833001 Vitis vinifera HOM05D005810 ORTHO05D007279 2.5e-119 432.6 312 70.8
CSS0027419 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 3.2e-119 432.2 322 70.5
Cc02_g31830 Coffea canephora HOM05D005810 ORTHO05D007279 3.2e-119 432.2 311 70.1
Sc09g0003830 Simmondsia chinensis HOM05D005810 ORTHO05D007279 2.1e-118 429.5 314 69.7
Thecc.05G287300 Theobroma cacao HOM05D005810 ORTHO05D007279 3.5e-118 428.7 311 68.5
Cfa006452 Carpinus fangiana HOM05D005810 ORTHO05D007279 3.9e-117 425.2 312 69.6
Haze_04339 Corylus avellana HOM05D005810 ORTHO05D007279 5.1e-117 424.9 312 69.6
Duzib177G1000 Durio zibethinus HOM05D005810 ORTHO05D007279 1.5e-116 423.3 311 68.2
Atru.chr2.784 Acer truncatum HOM05D005810 ORTHO05D007279 2.5e-116 422.5 316 68.7
Gohir.A11G254200 Gossypium hirsutum HOM05D005810 ORTHO05D007279 4.3e-116 421.8 310 68.1
THA.LOC104821678 Tarenaya hassleriana HOM05D005810 ORTHO05D007279 4.3e-116 421.8 314 68.5
Gohir.D11G264000 Gossypium hirsutum HOM05D005810 ORTHO05D007279 5.7e-116 421.4 310 69.0
Gorai.007G284000 Gossypium raimondii HOM05D005810 ORTHO05D007279 5.7e-116 421.4 310 69.0
CiPaw.07G064800 Carya illinoinensis HOM05D005810 ORTHO05D007279 7.4e-116 421.0 312 68.6
Eucgr.B01694 Eucalyptus grandis HOM05D005810 ORTHO05D007279 1.3e-115 420.2 314 68.2
Manes.09G154600 Manihot esculenta HOM05D005810 ORTHO05D007279 8.2e-115 417.5 313 68.4
PGR031G1118 Punica granatum HOM05D005810 ORTHO05D007279 1.1e-114 417.2 311 68.2
Nitab4.5_0005059g0010 Nicotiana tabacum HOM05D005810 ORTHO05D007279 1.4e-114 416.8 313 68.7
DCAR_006618 Daucus carota HOM05D005810 ORTHO05D007279 1.8e-114 416.4 312 66.3
Ciclev10003382m.g Citrus clementina HOM05D005810 ORTHO05D007279 5.3e-114 414.8 316 67.4
Potri.005G051400 Populus trichocarpa HOM05D005810 ORTHO05D007279 9.0e-114 414.1 319 68.0
QL03p024871 Quercus lobata HOM05D005810 ORTHO05D007279 1.5e-113 413.3 311 67.8
Peaxi162Scf00282g00136 Petunia axillaris HOM05D005810 ORTHO05D007279 3.4e-113 412.1 313 67.7
RcHm_v2.0_Chr3g0451831 Rosa chinensis HOM05D005810 ORTHO05D007279 3.4e-113 412.1 312 66.3
Lj7C488G4 Lonicera japonica HOM05D005810 ORTHO05D007279 8.5e-112 407.5 312 67.3
Solyc01g097600.2 Solanum lycopersicum HOM05D005810 ORTHO05D007279 1.1e-111 407.1 312 68.3
Prupe.6G340900 Prunus persica HOM05D005810 ORTHO05D007279 3.2e-111 405.6 312 66.3
Sopen01g041230 Solanum pennellii HOM05D005810 ORTHO05D007279 7.2e-111 404.4 312 67.6
Migut.B01074 Erythranthe guttata HOM05D005810 ORTHO05D007279 1.6e-110 403.3 314 65.9
CANSAT54G2140 Cannabis sativa HOM05D005810 ORTHO05D007279 2.7e-110 402.5 313 65.5
AL3G14980 Arabidopsis lyrata HOM05D005810 ORTHO05D007279 3.6e-110 402.1 314 64.0
ClCG06G009190 Citrullus lanatus HOM05D005810 ORTHO05D007279 1.0e-109 400.6 311 65.3
Lsat_1_v5_gn_5_37760 Lactuca sativa HOM05D005810 ORTHO05D007279 1.8e-109 399.8 316 64.9
Manes.08G132300 Manihot esculenta HOM05D005810 ORTHO05D007279 2.3e-109 399.4 313 65.2
EL10Ac4g09107 Beta vulgaris HOM05D005810 ORTHO05D007279 3.0e-109 399.1 312 64.4
Sed0015078 Sechium edule HOM05D005810 ORTHO05D007279 3.0e-109 399.1 311 65.9
CsaV3_1G045590 Cucumis sativus L. HOM05D005810 ORTHO05D007279 8.8e-109 397.5 311 65.6
Sp3g03650 Schrenkiella parvula HOM05D005810 ORTHO05D007279 8.8e-109 397.5 312 63.5
AUR62004921 Chenopodium quinoa HOM05D005810 ORTHO05D007279 3.3e-108 395.6 312 63.5
MBI11_g10322_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 3.3e-108 395.6 328 63.7
CARHR079070 Cardamine hirsuta HOM05D005810 ORTHO05D007279 5.7e-108 394.8 314 63.4
AT3G04820 Arabidopsis thaliana HOM05D005810 ORTHO05D007279 7.4e-108 394.4 314 63.4
MELO3C024669.2 Cucumis melo HOM05D005810 ORTHO05D007279 7.4e-108 394.4 311 64.6
FvH4_6g03330 Fragaria vesca HOM05D005810 ORTHO05D007279 7.4e-108 394.4 308 64.3
Thhalv10022286m.g Eutrema salsugineum HOM05D005810 ORTHO05D007279 9.7e-108 394.0 313 62.9
Glyma.03G245900 Glycine max HOM05D005810 ORTHO05D007279 9.7e-108 394.0 315 65.4
Aqoxy5G00419 Aquilegia oxysepala HOM05D005810 ORTHO05D007279 1.3e-107 393.7 311 64.6
Aa31LG5G15210 Aethionema arabicum HOM05D005810 ORTHO05D007279 2.8e-107 392.5 346 59.0
BcaB04g19298 Brassica carinata HOM05D005810 ORTHO05D007279 3.7e-107 392.1 312 63.8
HanXRQChr12g0379621 Helianthus annuus HOM05D005810 ORTHO05D007279 3.7e-107 392.1 306 65.7
SalBow8G0563 Salvia bowleyana HOM05D005810 ORTHO05D007279 4.8e-107 391.7 313 64.2
Lalb_Chr18g0045021 Lupinus albus HOM05D005810 ORTHO05D007279 1.1e-106 390.6 310 64.2
vmacro14215 Vaccinium macrocarpon HOM05D005810 ORTHO05D007279 1.1e-106 390.6 312 65.4
arahy.Tifrunner.gnm1.ann1.BBX725 Arachis hypogaea HOM05D005810 ORTHO05D007279 1.4e-106 390.2 319 66.1
arahy.Tifrunner.gnm1.ann1.E80190 Arachis hypogaea HOM05D005810 ORTHO05D007279 1.4e-106 390.2 319 66.1
AUR62001034 Chenopodium quinoa HOM05D005810 ORTHO05D007279 1.4e-106 390.2 312 64.1
BcaC01g04347 Brassica carinata HOM05D005810 ORTHO05D007279 1.8e-106 389.8 312 62.8
BolC3t16404H Brassica oleracea HOM05D005810 ORTHO05D007279 2.4e-106 389.4 313 63.6
A03p33850 Brassica napus HOM05D005810 ORTHO05D007279 1.5e-105 386.7 313 63.6
BraA03t12559Z Brassica rapa HOM05D005810 ORTHO05D007279 1.5e-105 386.7 313 63.6
C03p41160 Brassica napus HOM05D005810 ORTHO05D007279 3.4e-105 385.6 313 62.6
Ah.06g192190 Amaranthus hybridus HOM05D005810 ORTHO05D007279 7.7e-105 384.4 310 63.2
VMungo0222G0001 Vigna mungo HOM05D005810 ORTHO05D007279 7.7e-105 384.4 315 62.9
Phvul.006G100200 Phaseolus vulgaris HOM05D005810 ORTHO05D007279 1.0e-104 384.0 315 63.5
Lj1g0027742 Lotus japonicus HOM05D005810 ORTHO05D007279 3.8e-104 382.1 318 64.5
MD04G1221700 Malus domestica HOM05D005810 ORTHO05D007279 6.5e-104 381.3 311 64.0
PSO832G3650 Papaver somniferum HOM05D005810 ORTHO05D007279 7.2e-103 377.9 314 63.4
Ca_09411_v3 Cicer arietinum L. HOM05D005810 ORTHO05D007279 9.4e-103 377.5 322 60.9
MD12G1237800 Malus domestica HOM05D005810 ORTHO05D007279 1.2e-102 377.1 311 63.3
PSO210G1835 Papaver somniferum HOM05D005810 ORTHO05D007279 2.7e-102 375.9 316 62.3
ECA232G3974 Erigeron canadensis HOM05D005810 ORTHO05D007279 1.0e-101 374.0 321 59.8
Medtr7g114850 Medicago truncatula HOM05D005810 ORTHO05D007279 6.7e-101 371.3 323 60.1
Cpa.g.sc117.72 Carica papaya HOM05D005810 ORTHO05D007279 8.8e-101 370.9 321 62.3
FAN05G0700 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.7e-99 366.7 308 61.4
FAN14G4259 Fragaria x ananassa HOM05D005810 ORTHO05D007279 3.7e-99 365.5 308 60.1
Psat3g008040 Pisum sativum HOM05D005810 ORTHO05D007279 4.8e-99 365.2 322 60.2
FAN05G1843 Fragaria x ananassa HOM05D005810 ORTHO05D007279 4.1e-98 362.1 308 60.7
FAN02G1150 Fragaria x ananassa HOM05D005810 ORTHO05D007279 2.0e-97 359.8 308 60.4
unitig_37.g12634 Utricularia gibba HOM05D005810 ORTHO05D007279 3.5e-97 359.0 312 59.6
ATR0665G477 Amborella trichopoda HOM05D005810 ORTHO05D007279 3.8e-96 355.5 338 54.4
CDE05G3473 Ceratophyllum demersum HOM05D005810 ORTHO05D007279 1.9e-95 353.2 320 60.6
Glyma.19G243400 Glycine max HOM05D005810 ORTHO05D007279 1.9e-95 353.2 312 60.6
Hund06958 Selenicereus undatus HOM05D005810 ORTHO05D007279 3.6e-94 349.0 314 60.2
HPP92_028013 Vanilla planifolia HOM05D005810 ORTHO05D007279 6.1e-94 348.2 316 57.9
CAN.G134.120 Capsicum annuum HOM05D005810 ORTHO05D007279 8.0e-94 347.8 285 64.9
Zm00001eb352870 Zea mays HOM05D005810 ORTHO05D007279 4.1e-90 335.5 320 55.0
Os05g0509300 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 7.0e-90 334.7 323 54.2
Os01g0773000 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 5.5e-87 325.1 319 55.8
Carub.0003s0400 Capsella rubella HOM05D005810 ORTHO05D007279 1.5e-84 317.0 256 62.5
Zm00001eb328420 Zea mays HOM05D005810 ORTHO05D007279 5.3e-82 308.5 316 53.2
AagrBONN_evm.TU.Sc2ySwM_362.2883 Anthoceros agrestis HOM05D005810 ORTHO05D007279 4.2e-79 298.9 339 48.1
Pp3c18_8560 Physcomitrium patens HOM05D005810 ORTHO05D007279 1.2e-78 297.4 343 46.9
SMO351G0210 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 2.9e-72 276.2 319 45.8
Mapoly0092s0013 Marchantia polymorpha HOM05D005810 ORTHO05D007279 9.5e-71 271.2 340 44.1
TPR.G6991 Trifolium pratense HOM05D005810 ORTHO05D007279 3.7e-59 232.6 148 74.3
Nitab4.5_0005729g0060 Nicotiana tabacum HOM05D005810 ORTHO05D007279 5.2e-53 212.2 193 58.0
SMO364G0521 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 6.8e-53 211.8 316 39.2
TAR365G0727 Trochodendron aralioides HOM05D005810 ORTHO05D007279 7.5e-52 208.4 121 84.3
MCO09G788 Micromonas commoda HOM05D005810 ORTHO05D007279 9.8e-52 208.0 380 37.1
SGA_v2.0_scaffold92G28303 Striga asiatica HOM05D005810 ORTHO05D007279 2.9e-51 206.5 192 57.3
CBR_g36821 Chara braunii HOM05D005810 ORTHO05D007279 5.4e-50 202.2 381 36.2
Oeu060673.3 Olea europaea HOM05D005810 ORTHO05D007279 7.1e-50 201.8 200 52.5
Nitab4.5_0005729g0080 Nicotiana tabacum HOM05D005810 ORTHO05D007279 5.4e-42 175.6 101 88.1
TPR.G21485 Trifolium pratense HOM05D005810 ORTHO05D007279 2.8e-38 163.3 143 60.1
PRCOL_00005025 Prasinoderma coloniale HOM05D005810 ORTHO05D007279 4.9e-35 152.5 306 34.0
Cre01.g007651 Chlamydomonas reinhardtii HOM05D005810 ORTHO05D007279 2.1e-25 120.6 167 44.3
Eucgr.B02108 Eucalyptus grandis HOM05D005810 ORTHO05D007279 1.7e-24 117.5 107 57.9
Zm00001eb054900 Zea mays HOM05D005810 ORTHO05D007279 1.7e-24 117.5 78 71.8
Zm00001eb281050 Zea mays HOM05D005810 ORTHO05D007279 1.2e-20 104.8 67 71.6
SHI07786 Sapria himalayana HOM05D005810 ORTHO05D007279 1.4e-13 81.3 51 74.5
MBI11_g02497_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 1.8e-13 80.9 77 59.7
Mapoly0081s0042 Marchantia polymorpha HOM05D005810 ORTHO05D007279 8.4e-11 72.0 51 62.7
Mapoly0027s0098 Marchantia polymorpha HOM05D005810 ORTHO05D007279 2.5e-10 70.5 76 48.7
Lsat_1_v5_gn_5_94521 Lactuca sativa HOM05D000428 ORTHO05D022850 7.9e-09 65.5 136 33.8
HPP92_018612 Vanilla planifolia HOM05D005810 ORTHO05D007279 6.2e-06 55.8 33 72.7


User provided reference genes

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