Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10959 Davidia involucrata HOM05D003724 ORTHO05D004367 0.0e+00 1278.1 656 100.0
Lj3C1068T3 Lonicera japonica HOM05D003724 ORTHO05D004367 2.3e-282 975.3 600 83.5
Actinidia08073 Actinidia chinensis HOM05D003724 ORTHO05D004367 4.2e-276 954.5 602 83.2
Thecc.02G209200 Theobroma cacao HOM05D003724 ORTHO05D004367 8.5e-261 903.7 602 77.4
TWI75G0323 Tripterygium wilfordii HOM05D003724 ORTHO05D004367 1.0e-258 896.7 602 77.6
CiPaw.05G110100 Carya illinoinensis HOM05D003724 ORTHO05D004367 4.8e-256 887.9 604 77.0
Potri.003G173200 Populus trichocarpa HOM05D003724 ORTHO05D004367 5.0e-253 877.9 602 76.2
Rhsim12G0026000 Rhododendron simsii HOM05D003724 ORTHO05D004367 1.2e-251 873.2 595 78.5
Atru.chr11.2319 Acer truncatum HOM05D003724 ORTHO05D004367 8.0e-251 870.5 603 76.3
Gohir.A03G126400 Gossypium hirsutum HOM05D003724 ORTHO05D004367 8.0e-251 870.5 603 75.1
TAR374G1082 Trochodendron aralioides HOM05D003724 ORTHO05D004367 1.8e-250 869.4 602 75.9
QL03p052803 Quercus lobata HOM05D003724 ORTHO05D004367 5.2e-250 867.8 615 74.0
Nitab4.5_0003981g0060 Nicotiana tabacum HOM05D003724 ORTHO05D004367 4.4e-249 864.8 608 74.8
Gorai.005G167400 Gossypium raimondii HOM05D003724 ORTHO05D004367 3.7e-248 861.7 603 74.6
Actinidia30650 Actinidia chinensis HOM05D003724 ORTHO05D004367 5.3e-247 857.8 604 76.5
Migut.C00176 Erythranthe guttata HOM05D003724 ORTHO05D004367 9.1e-247 857.1 603 75.5
RcHm_v2.0_Chr4g0430291 Rosa chinensis HOM05D003724 ORTHO05D004367 3.5e-246 855.1 612 74.5
RcHm_v2.0_Chr4g0430341 Rosa chinensis HOM05D003724 ORTHO05D004367 9.4e-244 847.0 612 72.7
CANSAT01G0850 Cannabis sativa HOM05D003724 ORTHO05D004367 1.6e-243 846.3 606 74.8
Cpa.g.sc43.54 Carica papaya HOM05D003724 ORTHO05D004367 8.0e-243 844.0 615 73.3
Prupe.1G226200 Prunus persica HOM05D003724 ORTHO05D004367 1.0e-242 843.6 611 74.3
Migut.K00732 Erythranthe guttata HOM05D003724 ORTHO05D004367 1.4e-242 843.2 602 74.4
Oeu036873.1 Olea europaea HOM05D003724 ORTHO05D004367 4.0e-242 841.6 603 75.1
FvH4_4g23800 Fragaria vesca HOM05D003724 ORTHO05D004367 5.2e-242 841.3 612 72.9
Solyc04g007330.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 1.2e-241 840.1 601 74.2
Sopen04g002390 Solanum pennellii HOM05D003724 ORTHO05D004367 1.5e-241 839.7 602 73.8
MD16G1118900 Malus domestica HOM05D003724 ORTHO05D004367 2.2e-240 835.9 622 71.9
PGR102G1478 Punica granatum HOM05D003724 ORTHO05D004367 6.3e-240 834.3 603 73.5
THA.LOC104825509 Tarenaya hassleriana HOM05D003724 ORTHO05D004367 1.1e-239 833.6 603 72.5
FAN22G0779 Fragaria x ananassa HOM05D003724 ORTHO05D004367 2.4e-239 832.4 611 72.0
Oeu060814.1 Olea europaea HOM05D003724 ORTHO05D004367 2.9e-237 825.5 614 73.1
MD13G1118700 Malus domestica HOM05D003724 ORTHO05D004367 3.8e-237 825.1 613 72.8
SalBow2G1610 Salvia bowleyana HOM05D003724 ORTHO05D004367 8.5e-237 823.9 602 72.8
CSS0007637 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 4.0e-234 815.1 603 74.1
FAN17G0970 Fragaria x ananassa HOM05D003724 ORTHO05D004367 5.2e-234 814.7 641 69.1
Sabra03G0126700 Salix brachista HOM05D003724 ORTHO05D004367 9.8e-233 810.4 602 71.6
ECA233G0767 Erigeron canadensis HOM05D003724 ORTHO05D004367 5.9e-230 801.2 603 71.5
Peaxi162Scf00128g01233 Petunia axillaris HOM05D003724 ORTHO05D004367 1.5e-228 796.6 613 70.5
Sed0021729 Sechium edule HOM05D003724 ORTHO05D004367 1.9e-228 796.2 604 71.4
Aqoxy5G02771 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 4.2e-228 795.0 604 70.0
HanXRQChr08g0207781 Helianthus annuus HOM05D003724 ORTHO05D004367 5.5e-228 794.7 603 70.3
Hund06087 Selenicereus undatus HOM05D003724 ORTHO05D004367 5.5e-228 794.7 641 67.7
Potri.001G055201 Populus trichocarpa HOM05D003724 ORTHO05D004367 1.2e-227 793.5 632 69.8
Nitab4.5_0002441g0080 Nicotiana tabacum HOM05D003724 ORTHO05D004367 4.7e-227 791.6 637 67.5
MELO3C010743.2 Cucumis melo HOM05D003724 ORTHO05D004367 6.1e-227 791.2 604 71.4
Aqoxy7G01914 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 1.4e-226 790.0 604 69.9
Gohir.D02G149500 Gossypium hirsutum HOM05D003724 ORTHO05D004367 1.4e-226 790.0 607 70.2
SGA_v2.0_scaffold9G04687 Striga asiatica HOM05D003724 ORTHO05D004367 2.3e-226 789.3 586 71.8
CsaV3_2G025450 Cucumis sativus L. HOM05D003724 ORTHO05D004367 3.0e-226 788.9 604 71.0
arahy.Tifrunner.gnm1.ann1.3XH1N1 Arachis hypogaea HOM05D003724 ORTHO05D004367 9.8e-225 783.9 603 69.3
Sabra01G0039800 Salix brachista HOM05D003724 ORTHO05D004367 1.3e-224 783.5 633 68.1
Medtr3g085380 Medicago truncatula HOM05D003724 ORTHO05D004367 7.8e-222 774.2 607 69.0
Thhalv10018311m.g Eutrema salsugineum HOM05D003724 ORTHO05D004367 2.3e-221 772.7 603 69.3
Haze_12416 Corylus avellana HOM05D003724 ORTHO05D004367 1.2e-219 766.9 559 72.8
Lj1g0003468 Lotus japonicus HOM05D003724 ORTHO05D004367 1.4e-218 763.5 607 69.0
GSVIVG01010479001 Vitis vinifera HOM05D003724 ORTHO05D004367 4.0e-218 761.9 513 76.8
TAR622G1117 Trochodendron aralioides HOM05D003724 ORTHO05D004367 8.9e-218 760.8 629 66.6
Aa31sc377G30 Aethionema arabicum HOM05D003724 ORTHO05D004367 1.5e-217 760.0 626 66.0
Lalb_Chr01g0009271 Lupinus albus HOM05D003724 ORTHO05D004367 4.4e-217 758.4 612 67.6
AL2G25920 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 6.4e-216 754.6 605 67.6
Psat5g096280 Pisum sativum HOM05D003724 ORTHO05D004367 6.4e-216 754.6 606 67.5
AUR62021613 Chenopodium quinoa HOM05D003724 ORTHO05D004367 5.4e-215 751.5 606 66.5
TPR.G28283 Trifolium pratense HOM05D003724 ORTHO05D004367 5.4e-215 751.5 617 66.6
Sp5g22320 Schrenkiella parvula HOM05D003724 ORTHO05D004367 6.0e-214 748.0 603 67.8
EL10Ac6g13492 Beta vulgaris HOM05D003724 ORTHO05D004367 1.9e-212 743.0 628 65.0
Nitab4.5_0003884g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 4.3e-212 741.9 580 68.6
PSO339G4917 Papaver somniferum HOM05D003724 ORTHO05D004367 1.2e-211 740.3 609 65.8
PSO478G4090 Papaver somniferum HOM05D003724 ORTHO05D004367 1.2e-211 740.3 609 65.5
CARHR059910 Cardamine hirsuta HOM05D003724 ORTHO05D004367 1.6e-211 740.0 606 66.0
Sc04g0010100 Simmondsia chinensis HOM05D003724 ORTHO05D004367 1.6e-211 740.0 554 71.8
VMungo1383G3407 Vigna mungo HOM05D003724 ORTHO05D004367 1.8e-210 736.5 640 63.9
Lalb_Chr03g0034531 Lupinus albus HOM05D003724 ORTHO05D004367 2.3e-210 736.1 636 64.8
AT1G67370 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 5.2e-210 734.9 604 66.1
Lsat_1_v5_gn_8_147680 Lactuca sativa HOM05D003724 ORTHO05D004367 8.9e-210 734.2 605 66.3
PSO782G1352 Papaver somniferum HOM05D003724 ORTHO05D004367 1.2e-209 733.8 609 65.4
PGSC0003DMG400029108 Solanum tuberosum HOM05D003724 ORTHO05D004367 1.2e-209 733.8 549 71.0
A07p33960 Brassica napus HOM05D003724 ORTHO05D004367 7.5e-209 731.1 605 65.3
PSO384G3745 Papaver somniferum HOM05D003724 ORTHO05D004367 2.9e-208 729.2 610 65.2
PSO478G5007 Papaver somniferum HOM05D003724 ORTHO05D004367 4.9e-208 728.4 611 64.6
Nitab4.5_0002699g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 6.4e-208 728.0 574 68.1
BraA07t31023Z Brassica rapa HOM05D003724 ORTHO05D004367 1.1e-207 727.2 604 65.2
BolC6t39148H Brassica oleracea HOM05D003724 ORTHO05D004367 1.9e-207 726.5 604 65.4
C06p42900 Brassica napus HOM05D003724 ORTHO05D004367 4.1e-207 725.3 604 65.2
Ca_16461_v3 Cicer arietinum L. HOM05D003724 ORTHO05D004367 7.0e-207 724.5 605 66.3
AUR62008480 Chenopodium quinoa HOM05D003724 ORTHO05D004367 6.0e-206 721.5 622 63.0
ATR0561G244 Amborella trichopoda HOM05D003724 ORTHO05D004367 3.0e-205 719.2 627 64.8
PSO782G3500 Papaver somniferum HOM05D003724 ORTHO05D004367 5.1e-205 718.4 611 64.3
BcaC08g46167 Brassica carinata HOM05D003724 ORTHO05D004367 1.1e-204 717.2 603 64.8
Glyma.18G006800 Glycine max HOM05D003724 ORTHO05D004367 8.1e-203 711.1 501 72.9
ClCG08G017130 Citrullus lanatus HOM05D003724 ORTHO05D004367 1.2e-201 707.2 600 65.7
Cc09_g04930 Coffea canephora HOM05D003724 ORTHO05D004367 3.4e-201 705.7 541 70.8
arahy.Tifrunner.gnm1.ann1.QLFJ9Y Arachis hypogaea HOM05D003724 ORTHO05D004367 6.0e-198 694.9 603 63.2
Nn3g16465 Nelumbo nucifera HOM05D003724 ORTHO05D004367 6.2e-195 684.9 611 62.4
HPP92_003196 Vanilla planifolia HOM05D003724 ORTHO05D004367 3.1e-194 682.6 604 62.4
CDE05G2922 Ceratophyllum demersum HOM05D003724 ORTHO05D004367 2.3e-189 666.4 603 61.0
Ah.01g020690 Amaranthus hybridus HOM05D003724 ORTHO05D004367 3.0e-189 666.0 609 61.1
Carub.0002s1366 Capsella rubella HOM05D003724 ORTHO05D004367 2.5e-188 662.9 550 65.8
Lj1g0008936 Lotus japonicus HOM05D003724 ORTHO05D004367 9.6e-188 661.0 614 61.9
RcHm_v2.0_Chr4g0430321 Rosa chinensis HOM05D003724 ORTHO05D004367 2.9e-184 649.4 512 67.4
Sed0012468 Sechium edule HOM05D003724 ORTHO05D004367 8.1e-179 631.3 551 64.1
vmacro01062 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 4.0e-178 629.0 398 81.2
Zm00001eb102420 Zea mays HOM05D003724 ORTHO05D004367 7.6e-177 624.8 606 58.7
Os09g0506800 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 2.7e-174 616.3 606 58.6
Ciclev10033677m.g Citrus clementina HOM05D003724 ORTHO05D004367 7.9e-174 614.8 600 59.5
Manes.12G011600 Manihot esculenta HOM05D003724 ORTHO05D004367 2.9e-160 569.7 339 83.2
MBI06_g20299_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 3.8e-160 569.3 606 56.1
Glyma.11G250400 Glycine max HOM05D003724 ORTHO05D004367 1.3e-157 560.8 502 61.8
CAN.G804.4 Capsicum annuum HOM05D003724 ORTHO05D004367 1.5e-156 557.4 340 82.6
CSS0039632 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 6.3e-155 552.0 319 85.3
MBI06_g46773_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 8.8e-149 531.6 436 64.4
PSO339G0549 Papaver somniferum HOM05D003724 ORTHO05D004367 3.1e-146 523.1 605 51.6
C06p38720 Brassica napus HOM05D003724 ORTHO05D004367 3.4e-145 519.6 563 53.1
FAN24G3534 Fragaria x ananassa HOM05D003724 ORTHO05D004367 9.4e-143 511.5 489 59.3
BcaB03g15202 Brassica carinata HOM05D003724 ORTHO05D004367 1.8e-141 507.3 337 75.1
unitig_8.g3138 Utricularia gibba HOM05D003724 ORTHO05D004367 3.7e-139 499.6 507 56.6
COL.COLO4_20398 Corchorus olitorius HOM05D003724 ORTHO05D004367 6.7e-133 478.8 389 68.9
AagrBONN_evm.TU.Sc2ySwM_368.2626 Anthoceros agrestis HOM05D003724 ORTHO05D004367 2.8e-110 403.7 495 47.3
PSO170G4962 Papaver somniferum HOM05D003724 ORTHO05D004367 5.2e-109 399.4 388 58.0
FAN12G2603 Fragaria x ananassa HOM05D003724 ORTHO05D004367 1.0e-96 358.6 309 66.3
AL1G56910 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 2.3e-96 357.5 374 56.7
CARHR058050 Cardamine hirsuta HOM05D003724 ORTHO05D004367 2.0e-92 344.4 278 65.8
MBI06_g32743_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 8.3e-91 339.0 326 58.6
DCAR_026466 Daucus carota HOM05D003724 ORTHO05D004367 5.4e-90 336.3 196 88.3
PSO339G0625 Papaver somniferum HOM05D003724 ORTHO05D004367 2.1e-89 334.3 366 52.7
Mapoly0003s0194 Marchantia polymorpha HOM05D003724 ORTHO05D004367 1.5e-87 328.2 552 39.5
SHI17968 Sapria himalayana HOM05D003724 ORTHO05D004367 1.8e-85 321.2 231 71.0
CAN.G804.3 Capsicum annuum HOM05D003724 ORTHO05D004367 5.1e-80 303.1 259 64.1
CBR_g17956 Chara braunii HOM05D003724 ORTHO05D004367 3.4e-76 290.4 676 35.1
FvH4_4g23791 Fragaria vesca HOM05D003724 ORTHO05D004367 1.9e-71 274.6 259 61.8
Solyc05g015370.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 4.3e-71 273.5 242 59.9
SMO116G0148 Selaginella moellendorffii HOM05D003724 ORTHO05D004367 7.6e-68 262.7 226 58.4
AT4G32200 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 2.9e-67 260.8 278 55.8
FAN12G4010 Fragaria x ananassa HOM05D003724 ORTHO05D004367 4.6e-65 253.4 266 57.9
SHI17969 Sapria himalayana HOM05D003724 ORTHO05D004367 3.5e-57 227.3 265 53.6
PSO782G0388 Papaver somniferum HOM05D003724 ORTHO05D004367 5.1e-56 223.4 257 51.4
Pp3c5_4780 Physcomitrium patens HOM05D003724 ORTHO05D004367 8.7e-56 222.6 650 30.3
FvH4_2g22740 Fragaria vesca HOM05D003724 ORTHO05D004367 2.8e-54 217.6 222 56.3
BcaB03g15203 Brassica carinata HOM05D003724 ORTHO05D004367 8.1e-54 216.1 262 53.4
Os12g0606600 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 2.1e-49 201.4 262 47.7
PSO832G0175 Papaver somniferum HOM05D003724 ORTHO05D004367 2.7e-49 201.1 119 83.2
Sopen05g010640 Solanum pennellii HOM05D003724 ORTHO05D004367 2.3e-48 198.0 106 93.4
COL.COLO4_20397 Corchorus olitorius HOM05D003724 ORTHO05D004367 6.7e-48 196.4 149 70.5
Phvul.001G261701 Phaseolus vulgaris HOM05D003724 ORTHO05D004367 1.1e-45 189.1 260 48.1
Nitab4.5_0000767g0030 Nicotiana tabacum HOM05D003724 ORTHO05D004367 3.8e-43 180.6 210 50.0
Hma1.2p1_0200F.1_g085970 Hydrangea macrophylla HOM05D003724 ORTHO05D004367 4.2e-42 177.2 321 37.7
CSS0010492 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 5.5e-42 176.8 135 72.6
Hma1.2p1_0053F.1_g030850 Hydrangea macrophylla HOM05D003724 ORTHO05D004367 1.8e-40 171.8 385 34.0
Solyc05g015360.2 Solanum lycopersicum HOM05D003724 ORTHO05D004367 1.8e-40 171.8 110 80.0
Cre10.g452550 Chlamydomonas reinhardtii HOM05D003724 ORTHO05D004367 3.9e-40 170.6 272 40.4
FAN07G2055 Fragaria x ananassa HOM05D003724 ORTHO05D004367 2.8e-38 164.5 195 54.9
vmacro01061 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 1.4e-37 162.2 135 71.9
Nitab4.5_0002119g0030 Nicotiana tabacum HOM05D003724 ORTHO05D004367 5.5e-34 150.2 237 40.1
FAN12G4031 Fragaria x ananassa HOM05D003724 ORTHO05D004367 1.0e-32 146.0 168 53.0
GSVIVG01010478001 Vitis vinifera HOM05D003724 ORTHO05D004367 1.8e-32 145.2 75 97.3
RcHm_v2.0_Chr4g0430331 Rosa chinensis HOM05D003724 ORTHO05D004367 3.0e-32 144.4 75 97.3
Glyma.11G250351 Glycine max HOM05D003724 ORTHO05D004367 2.5e-31 141.4 81 88.9
Solyc05g015380.2 Solanum lycopersicum HOM05D003724 ORTHO05D004367 5.7e-31 140.2 162 53.1
PSO170G3909 Papaver somniferum HOM05D003724 ORTHO05D004367 2.4e-29 134.8 174 46.6
SHI17966 Sapria himalayana HOM05D003724 ORTHO05D004367 9.1e-29 132.9 126 60.3
vmacro18929 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 3.4e-28 131.0 175 46.3
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 4.5e-28 130.6 316 35.4
Lsat_1_v5_gn_3_110541 Lactuca sativa HOM05D003724 ORTHO05D004367 2.5e-26 124.8 113 57.5
TPR.G40282 Trifolium pratense HOM05D003724 ORTHO05D004367 6.7e-24 116.7 122 53.3
Sopen05g010670 Solanum pennellii HOM05D003724 ORTHO05D004367 8.2e-22 109.8 124 54.0
Os01g0165800 Oryza sativa ssp. japonica HOM05D020709 ORTHO05D004367 1.8e-21 108.6 133 42.1
PSO063G4593 Papaver somniferum HOM05D003724 ORTHO05D004367 2.2e-19 101.7 78 64.1
CSS0008698 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 2.9e-19 101.3 88 69.3
PRCOL_00002813 Prasinoderma coloniale HOM05D003724 ORTHO05D004367 3.8e-19 100.9 250 30.8
Lj3g0010411 Lotus japonicus HOM05D003724 ORTHO05D004367 1.6e-12 79.0 119 46.2
Ca_24313_v3 Cicer arietinum L. HOM05D000703 ORTHO05D004367 8.5e-11 73.2 104 45.2
PSO561G0043 Papaver somniferum HOM05D003724 ORTHO05D004367 4.2e-10 70.9 83 54.2
DCAR_028604 Daucus carota HOM05D000366 ORTHO05D000437 1.2e-09 69.3 50 70.0
SHI18623 Sapria himalayana HOM05D003724 ORTHO05D004367 2.3e-08 65.1 47 66.0
MBI07_g38547_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 6.8e-08 63.5 74 45.9
MBI01_g03586_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 1.2e-07 62.8 72 47.2
MBI13_g41189_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 1.2e-07 62.8 72 47.2
MBI13_g14579_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 1.5e-07 62.4 61 54.1
MBI16_g19191_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 4.4e-07 60.8 72 45.8
QL06p013707 Quercus lobata HOM05D003724 ORTHO05D000062 1.7e-06 58.9 38 84.2
Sopen05g010660 Solanum pennellii HOM05D003724 ORTHO05D004367 2.2e-06 58.5 55 63.6
QL10p034497 Quercus lobata HOM05D003724 ORTHO05D004367 4.8e-06 57.4 38 81.6
Rhsim02G0239300 Rhododendron simsii HOM05D003724 ORTHO05D004367 6.3e-06 57.0 39 69.2
Ah.02g111740 Amaranthus hybridus HOM05D003315 ORTHO05D003407 8.3e-06 56.6 43 67.4
Ah.16g100850 Amaranthus hybridus HOM05D003315 ORTHO05D003407 8.3e-06 56.6 43 67.4
vmacro05008 Vaccinium macrocarpon HOM05D000208 ORTHO05D426771 8.3e-06 56.6 73 45.2


User provided reference genes

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