Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09441 Davidia involucrata HOM05D000104 ORTHO05D004363 2.3e-193 678.7 344 100.0
Dinv37465 Davidia involucrata HOM05D000104 ORTHO05D004363 2.5e-179 632.1 343 93.3
CSS0023365 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D004363 2.6e-160 568.9 342 84.5
Actinidia03314 Actinidia chinensis HOM05D000104 ORTHO05D004363 2.3e-156 555.8 340 81.2
Atru.chr2.1616 Acer truncatum HOM05D000104 ORTHO05D004363 3.5e-149 531.9 343 80.2
GSVIVG01019359001 Vitis vinifera HOM05D000104 ORTHO05D004363 9.0e-145 517.3 352 76.4
Thecc.05G236400 Theobroma cacao HOM05D000104 ORTHO05D004363 2.9e-143 512.3 342 76.6
TWI32G0549 Tripterygium wilfordii HOM05D000104 ORTHO05D004363 3.8e-143 511.9 341 77.1
Ciclev10030472m.g Citrus clementina HOM05D000104 ORTHO05D004363 1.9e-142 509.6 343 75.8
Nn3g17003 Nelumbo nucifera HOM05D000104 ORTHO05D004363 6.0e-141 504.6 343 73.5
Manes.08G155800 Manihot esculenta HOM05D000104 ORTHO05D004363 3.0e-140 502.3 341 76.0
COL.COLO4_33474 Corchorus olitorius HOM05D000104 ORTHO05D004363 6.6e-140 501.1 342 74.6
Prupe.6G000100 Prunus persica HOM05D000104 ORTHO05D004363 6.6e-140 501.1 343 77.3
Sopen08g023150 Solanum pennellii HOM05D000104 ORTHO05D004363 1.9e-139 499.6 341 76.2
Solyc08g074520.2 Solanum lycopersicum HOM05D000104 ORTHO05D004363 4.3e-139 498.4 341 76.2
Duzib177G0255 Durio zibethinus HOM05D000104 ORTHO05D004363 7.3e-139 497.7 343 74.9
DCAR_002184 Daucus carota HOM05D007440 ORTHO05D004363 3.6e-138 495.4 343 74.1
PSO832G0838 Papaver somniferum HOM05D000104 ORTHO05D004363 3.6e-138 495.4 345 73.9
Duzib128G0660 Durio zibethinus HOM05D000104 ORTHO05D004363 1.4e-137 493.4 342 74.9
RcHm_v2.0_Chr5g0084181 Rosa chinensis HOM05D000104 ORTHO05D004363 6.9e-137 491.1 341 75.7
Oeu007492.1 Olea europaea HOM05D000104 ORTHO05D004363 1.5e-136 490.0 341 74.8
SalBow4G3014 Salvia bowleyana HOM05D000104 ORTHO05D004363 4.5e-136 488.4 343 72.9
Gohir.A13G159800 Gossypium hirsutum HOM05D000104 ORTHO05D004363 1.3e-135 486.9 342 73.1
vmacro00211 Vaccinium macrocarpon HOM05D000104 ORTHO05D004363 1.3e-135 486.9 409 64.1
Gorai.013G197700 Gossypium raimondii HOM05D000104 ORTHO05D004363 2.2e-135 486.1 342 73.1
MSTRG.11830 Avicennia marina HOM05D000104 ORTHO05D004363 2.9e-135 485.7 343 72.0
Cfa017683 Carpinus fangiana HOM05D000104 ORTHO05D004363 2.9e-135 485.7 343 74.3
Migut.A00510 Erythranthe guttata HOM05D000104 ORTHO05D004363 2.9e-135 485.7 343 72.0
Potri.013G068400 Populus trichocarpa HOM05D000104 ORTHO05D004363 4.9e-135 485.0 341 74.5
VMungo1127G2256 Vigna mungo HOM05D000104 ORTHO05D004363 4.9e-135 485.0 343 74.1
Gohir.D13G165000 Gossypium hirsutum HOM05D000104 ORTHO05D004363 6.4e-135 484.6 342 72.8
FAN21G1945 Fragaria x ananassa HOM05D000104 ORTHO05D004363 1.1e-134 483.8 341 74.8
FvH4_3g46101 Fragaria vesca HOM05D000104 ORTHO05D004363 4.2e-134 481.9 341 75.1
Lj3g0018732 Lotus japonicus HOM05D000104 ORTHO05D004363 4.6e-133 478.4 341 73.9
Glyma.09G234400 Glycine max HOM05D000104 ORTHO05D004363 6.0e-133 478.0 343 73.2
Glyma.12G002300 Glycine max HOM05D000104 ORTHO05D004363 7.9e-133 477.6 343 73.2
Aqoxy7G00075 Aquilegia oxysepala HOM05D000104 ORTHO05D004363 3.0e-132 475.7 351 70.7
SGA_v2.0_scaffold27G11711 Striga asiatica HOM05D000104 ORTHO05D004363 1.1e-131 473.8 357 68.6
HanXRQChr03g0082351 Helianthus annuus HOM05D000104 ORTHO05D004363 5.6e-131 471.5 340 70.0
ClCG05G011380 Citrullus lanatus HOM05D000104 ORTHO05D004363 7.4e-131 471.1 343 71.1
Ca_19676_v3 Cicer arietinum L. HOM05D000104 ORTHO05D004363 2.8e-130 469.2 341 73.3
Phvul.011G002900 Phaseolus vulgaris HOM05D000104 ORTHO05D004363 2.8e-130 469.2 343 71.7
CANSAT35G1590 Cannabis sativa HOM05D000104 ORTHO05D004363 1.1e-129 467.2 342 72.8
PGR083G0814 Punica granatum HOM05D000104 ORTHO05D004363 1.4e-129 466.8 341 70.7
ECA240G3782 Erigeron canadensis HOM05D000104 ORTHO05D004363 2.0e-128 463.0 340 69.4
Medtr4g035100 Medicago truncatula HOM05D000104 ORTHO05D004363 2.0e-128 463.0 341 73.0
MD11G1000100 Malus domestica HOM05D000104 ORTHO05D004363 4.5e-128 461.8 342 72.2
THA.LOC104819143 Tarenaya hassleriana HOM05D000104 ORTHO05D004363 2.2e-127 459.5 340 70.3
Lalb_Chr01g0000141 Lupinus albus HOM05D000104 ORTHO05D004363 3.8e-127 458.8 342 72.5
Sed0011777 Sechium edule HOM05D000104 ORTHO05D004363 6.5e-127 458.0 342 70.5
Cc11_g04400 Coffea canephora HOM05D000104 ORTHO05D004363 1.1e-126 457.2 368 68.2
TPR.G31923 Trifolium pratense HOM05D000104 ORTHO05D004363 1.1e-126 457.2 340 72.9
MELO3C020235.2 Cucumis melo HOM05D000104 ORTHO05D004363 1.4e-126 456.8 343 68.8
Lsat_1_v5_gn_5_59321 Lactuca sativa HOM05D000104 ORTHO05D004363 9.3e-126 454.1 340 69.1
Psat7g148080 Pisum sativum HOM05D000104 ORTHO05D004363 2.1e-125 453.0 340 72.6
CsaV3_3G021040 Cucumis sativus L. HOM05D000104 ORTHO05D004363 2.7e-125 452.6 342 68.4
CsaV3_4G017740 Cucumis sativus L. HOM05D000104 ORTHO05D004363 2.7e-125 452.6 342 68.4
arahy.Tifrunner.gnm1.ann1.64GWQS Arachis hypogaea HOM05D000104 ORTHO05D004363 8.7e-124 447.6 382 65.2
Eucgr.D01125 Eucalyptus grandis HOM05D000104 ORTHO05D004363 1.1e-123 447.2 346 68.8
Lj7C413G9 Lonicera japonica HOM05D000104 ORTHO05D004363 5.0e-119 431.8 318 70.4
MD03G1000600 Malus domestica HOM05D000104 ORTHO05D004363 8.4e-119 431.0 317 71.6
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 1.4e-118 430.3 313 71.9
Aa31sc392G40 Aethionema arabicum HOM05D000104 ORTHO05D004363 2.7e-117 426.0 340 66.2
CARHR164200 Cardamine hirsuta HOM05D000104 ORTHO05D004363 2.3e-116 422.9 340 65.6
HPP92_015726 Vanilla planifolia HOM05D000104 ORTHO05D004363 6.7e-116 421.4 345 65.5
Thhalv10010052m.g Eutrema salsugineum HOM05D000104 ORTHO05D004363 1.1e-115 420.6 338 66.3
C08p29510 Brassica napus HOM05D000104 ORTHO05D004363 1.9e-115 419.9 338 66.9
A09p47280 Brassica napus HOM05D000104 ORTHO05D004363 3.3e-115 419.1 338 66.3
Sp5g08110 Schrenkiella parvula HOM05D000104 ORTHO05D004363 4.3e-115 418.7 338 66.0
AT3G54280 Arabidopsis thaliana HOM05D000104 ORTHO05D004363 9.7e-115 417.5 338 66.3
BolC8t50557H Brassica oleracea HOM05D000104 ORTHO05D004363 1.6e-114 416.8 338 66.6
AL5G35320 Arabidopsis lyrata HOM05D000104 ORTHO05D004363 2.8e-114 416.0 338 66.6
Carub.0005s2087 Capsella rubella HOM05D000104 ORTHO05D004363 6.3e-114 414.8 338 65.7
SHI06790 Sapria himalayana HOM05D000190 ORTHO05D004363 1.1e-113 414.1 342 64.9
BraA09t40189Z Brassica rapa HOM05D000104 ORTHO05D004363 9.0e-113 411.0 348 64.4
BcaC02g09076 Brassica carinata HOM05D000104 ORTHO05D004363 5.9e-112 408.3 338 65.1
Peaxi162Scf00213g01732 Petunia axillaris HOM05D000104 ORTHO05D004363 1.7e-111 406.8 328 67.7
ATR0665G650 Amborella trichopoda HOM05D000104 ORTHO05D004363 8.5e-111 404.4 327 65.7
CDE06G1340 Ceratophyllum demersum HOM05D000104 ORTHO05D004363 1.2e-109 400.6 353 61.5
Sabra13G0059700 Salix brachista HOM05D000104 ORTHO05D004363 6.7e-108 394.8 309 68.9
Zm00001eb297280 Zea mays HOM05D000104 ORTHO05D004363 8.8e-108 394.4 353 62.0
unitig_92.g28135 Utricularia gibba HOM05D000104 ORTHO05D004363 4.2e-102 375.6 313 63.6
unitig_93.g30710 Utricularia gibba HOM05D000104 ORTHO05D004363 5.5e-102 375.2 301 64.5
arahy.Tifrunner.gnm1.ann1.YM0GIL Arachis hypogaea HOM05D000104 ORTHO05D004363 1.6e-101 373.6 266 74.8
SEGI_24237 Sequoiadendron giganteum HOM05D000104 ORTHO05D004363 9.1e-97 357.8 348 58.3
Hund23685 Selenicereus undatus HOM05D000104 ORTHO05D004363 3.2e-94 349.4 346 59.0
CiPaw.09G169600 Carya illinoinensis HOM05D000104 ORTHO05D004363 5.2e-92 342.0 253 71.5
Sc05g0007890 Simmondsia chinensis HOM05D000104 ORTHO05D004363 7.5e-91 338.2 353 58.1
AUR62016963 Chenopodium quinoa HOM05D000104 ORTHO05D004363 3.5e-88 329.3 342 57.0
AUR62014777 Chenopodium quinoa HOM05D000104 ORTHO05D004363 4.5e-88 328.9 342 57.0
Mapoly0038s0059 Marchantia polymorpha HOM05D000104 ORTHO05D004363 5.9e-88 328.6 353 55.2
Pp3c3_11220 Physcomitrium patens HOM05D000104 ORTHO05D004363 5.0e-87 325.5 351 53.8
AagrBONN_evm.TU.Sc2ySwM_228.1549 Anthoceros agrestis HOM05D000104 ORTHO05D004363 4.2e-86 322.4 346 53.2
Ah.14g089210 Amaranthus hybridus HOM05D000104 ORTHO05D004363 9.4e-86 321.2 342 55.8
QL09p044755 Quercus lobata HOM05D000104 ORTHO05D004363 7.0e-81 305.1 204 76.0
Rhsim03G0207500 Rhododendron simsii HOM05D000104 ORTHO05D004363 1.2e-77 294.3 467 42.0
SMO223G0022 Selaginella moellendorffii HOM05D000104 ORTHO05D004363 2.1e-69 266.9 357 47.9
CAN.G195.24 Capsicum annuum HOM05D000104 ORTHO05D004363 4.6e-64 249.2 177 70.1
SGA_v2.0_scaffold269G46291 Striga asiatica HOM05D000104 ORTHO05D004363 6.2e-61 238.8 343 42.3
Cpa.g.sc73.37 Carica papaya HOM05D000104 ORTHO05D004363 1.5e-59 234.2 169 68.6
Haze_20464 Corylus avellana HOM05D000104 ORTHO05D004363 2.2e-58 230.3 218 57.3
Hma1.2p1_0268F.1_g107680 Hydrangea macrophylla HOM05D000104 ORTHO05D004363 9.2e-57 224.9 139 85.6
SGA_v2.0_scaffold447G51747 Striga asiatica HOM05D000104 ORTHO05D004363 5.8e-51 205.7 139 75.5
Nitab4.5_0002482g0010 Nicotiana tabacum HOM05D000104 ORTHO05D004363 1.7e-50 204.1 142 78.9
CBR_g57043 Chara braunii HOM05D000104 ORTHO05D004363 2.9e-50 203.4 429 37.1
CAN.G195.25 Capsicum annuum HOM05D000104 ORTHO05D004363 2.7e-48 196.8 137 77.4
C04p38170 Brassica napus HOM05D000104 ORTHO05D004363 1.1e-46 191.4 192 54.7
C04p38160 Brassica napus HOM05D000104 ORTHO05D004363 5.2e-44 182.6 174 57.5
BolC4t25391H Brassica oleracea HOM05D000104 ORTHO05D004363 8.9e-44 181.8 174 57.5
Hma1.2p1_0268F.1_g107670 Hydrangea macrophylla HOM05D000104 ORTHO05D004363 1.6e-40 171.0 107 82.2
Cre16.g687301 Chlamydomonas reinhardtii HOM05D000104 ORTHO05D004363 3.1e-36 156.8 363 33.9
Nitab4.5_0001131g0020 Nicotiana tabacum HOM05D000104 ORTHO05D004363 4.6e-32 142.9 103 74.8
Haze_20467 Corylus avellana HOM05D000104 ORTHO05D004363 3.4e-27 126.7 93 71.0
MCO02G056 Micromonas commoda HOM05D000104 ORTHO05D004363 9.6e-22 108.6 343 31.2
Oeu026040.2 Olea europaea HOM05D000104 ORTHO05D004363 5.8e-19 99.4 58 75.9
QL10p058190 Quercus lobata HOM05D000104 ORTHO05D004363 4.2e-17 93.2 77 61.0
PRCOL_00001942 Prasinoderma coloniale HOM05D000104 ORTHO05D004363 1.6e-16 91.3 378 27.5
ATR0559G076 Amborella trichopoda HOM05D000104 ORTHO05D004363 9.6e-14 82.0 58 62.1
BraA04t16249Z Brassica rapa HOM05D000104 ORTHO05D004363 6.9e-12 75.9 45 88.9
EL10Ac6g14346 Beta vulgaris HOM05D000104 ORTHO05D004363 1.3e-10 71.6 48 75.0
VMungo0464G1762 Vigna mungo HOM05D000001 ORTHO05D001247 6.7e-07 59.3 91 46.2


User provided reference genes

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