Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07544 Davidia involucrata HOM05D005098 ORTHO05D006646 3.4e-175 618.2 316 100.0
CSS0027379 Camellia sinensis var. sinensis HOM05D005098 ORTHO05D006646 1.5e-146 523.1 296 88.5
Actinidia07581 Actinidia chinensis HOM05D005098 ORTHO05D006646 3.7e-145 518.5 296 88.5
Rhsim10G0081000 Rhododendron simsii HOM05D005098 ORTHO05D006646 4.8e-145 518.1 296 88.5
RhsimUnG0054100 Rhododendron simsii HOM05D005098 ORTHO05D006646 4.8e-145 518.1 296 88.5
TAR627G0710 Trochodendron aralioides HOM05D005098 ORTHO05D006646 7.7e-143 510.8 296 85.5
Dinv40543 Davidia involucrata HOM05D005098 ORTHO05D006646 6.1e-140 501.1 326 80.7
Solyc02g078440.3 Solanum lycopersicum HOM05D005098 ORTHO05D006646 1.8e-139 499.6 297 84.2
Sopen02g023290 Solanum pennellii HOM05D005098 ORTHO05D006646 1.8e-139 499.6 297 84.2
TWI38G1357 Tripterygium wilfordii HOM05D005098 ORTHO05D006646 2.3e-139 499.2 296 84.1
Peaxi162Scf00736g00425 Petunia axillaris HOM05D005098 ORTHO05D006646 3.0e-139 498.8 297 83.8
CAN.G1164.12 Capsicum annuum HOM05D005098 ORTHO05D006646 4.0e-139 498.4 297 83.5
Lj7A690T49 Lonicera japonica HOM05D005098 ORTHO05D006646 9.7e-138 493.8 315 80.3
QL05p039825 Quercus lobata HOM05D005098 ORTHO05D006646 1.7e-137 493.0 296 83.8
Prupe.4G044800 Prunus persica HOM05D005098 ORTHO05D006646 4.8e-137 491.5 296 83.4
MSTRG.2567 Avicennia marina HOM05D005098 ORTHO05D006646 6.3e-137 491.1 297 81.8
Oeu017728.1 Olea europaea HOM05D005098 ORTHO05D006646 3.1e-136 488.8 297 81.5
MD05G1314300 Malus domestica HOM05D005098 ORTHO05D006646 2.7e-135 485.7 296 82.1
Migut.G00672 Erythranthe guttata HOM05D005098 ORTHO05D006646 1.3e-134 483.4 297 81.5
Lsat_1_v5_gn_4_52761 Lactuca sativa HOM05D005098 ORTHO05D006646 1.7e-134 483.0 297 80.8
CiPaw.09G058200 Carya illinoinensis HOM05D005098 ORTHO05D006646 2.2e-134 482.6 296 82.4
Nn1g06591 Nelumbo nucifera HOM05D005098 ORTHO05D006646 2.9e-134 482.3 296 81.4
Manes.17G044000 Manihot esculenta HOM05D005098 ORTHO05D006646 3.8e-134 481.9 296 81.1
CsaV3_6G050060 Cucumis sativus L. HOM05D005098 ORTHO05D006646 5.0e-134 481.5 295 82.4
MD10G1295600 Malus domestica HOM05D005098 ORTHO05D006646 5.0e-134 481.5 296 81.1
Lalb_Chr16g0383691 Lupinus albus HOM05D005098 ORTHO05D006646 1.5e-133 479.9 296 79.7
Sed0003361 Sechium edule HOM05D005098 ORTHO05D006646 3.2e-133 478.8 296 81.8
ClCG01G022890 Citrullus lanatus HOM05D005098 ORTHO05D006646 5.5e-133 478.0 301 80.1
arahy.Tifrunner.gnm1.ann1.Q8E5AY Arachis hypogaea HOM05D005098 ORTHO05D006646 7.2e-133 477.6 296 79.1
Sc17g0006240 Simmondsia chinensis HOM05D005098 ORTHO05D006646 7.2e-133 477.6 296 78.4
Duzib235G1364 Durio zibethinus HOM05D005098 ORTHO05D006646 9.4e-133 477.2 296 80.7
THA.LOC104814462 Tarenaya hassleriana HOM05D005098 ORTHO05D006646 9.4e-133 477.2 296 79.1
HanXRQChr17g0560221 Helianthus annuus HOM05D005098 ORTHO05D006646 2.1e-132 476.1 297 80.5
Duzib209G0004 Durio zibethinus HOM05D005098 ORTHO05D006646 4.7e-132 474.9 296 80.4
Gorai.011G026700 Gossypium raimondii HOM05D005098 ORTHO05D006646 8.0e-132 474.2 296 79.7
Cc01_g06430 Coffea canephora HOM05D005098 ORTHO05D006646 1.0e-131 473.8 298 79.9
Aqoxy7G02591 Aquilegia oxysepala HOM05D005098 ORTHO05D006646 1.4e-131 473.4 296 79.7
Eucgr.E03323 Eucalyptus grandis HOM05D005098 ORTHO05D006646 2.3e-131 472.6 296 79.1
Ciclev10009035m.g Citrus clementina HOM05D005098 ORTHO05D006646 1.5e-130 469.9 296 79.4
Lj4g0017402 Lotus japonicus HOM05D005098 ORTHO05D006646 2.6e-130 469.2 296 79.1
Eucgr.E03123 Eucalyptus grandis HOM05D005098 ORTHO05D006646 3.4e-130 468.8 298 78.9
Gohir.A10G024700 Gossypium hirsutum HOM05D005098 ORTHO05D006646 7.5e-130 467.6 302 78.1
VMungo0647G1277 Vigna mungo HOM05D005098 ORTHO05D006646 7.5e-130 467.6 296 79.1
Atru.chr10.1909 Acer truncatum HOM05D005098 ORTHO05D006646 9.8e-130 467.2 296 78.0
Sp7g17170 Schrenkiella parvula HOM05D005098 ORTHO05D006646 9.8e-130 467.2 301 78.1
BcaNung00134 Brassica carinata HOM05D005098 ORTHO05D006646 1.3e-129 466.8 301 77.4
CANSAT35G1139 Cannabis sativa HOM05D005098 ORTHO05D006646 1.7e-129 466.5 296 79.7
Psat7g112680 Pisum sativum HOM05D005098 ORTHO05D006646 3.7e-129 465.3 296 77.7
AT4G17020 Arabidopsis thaliana HOM05D005098 ORTHO05D006646 4.8e-129 464.9 301 77.4
AL7G37700 Arabidopsis lyrata HOM05D005098 ORTHO05D006646 8.3e-129 464.2 301 77.1
Phvul.002G227900 Phaseolus vulgaris HOM05D005098 ORTHO05D006646 8.3e-129 464.2 296 78.7
Aa31LG2G13100 Aethionema arabicum HOM05D005098 ORTHO05D006646 1.1e-128 463.8 301 77.1
Thhalv10025179m.g Eutrema salsugineum HOM05D005098 ORTHO05D006646 1.4e-128 463.4 301 76.7
FvH4_3g09430 Fragaria vesca HOM05D005098 ORTHO05D006646 1.4e-128 463.4 296 77.0
RcHm_v2.0_Chr5g0008121 Rosa chinensis HOM05D005098 ORTHO05D006646 1.8e-128 463.0 296 77.4
CARHR223580 Cardamine hirsuta HOM05D005098 ORTHO05D006646 2.4e-128 462.6 301 76.4
Haze_05744 Corylus avellana HOM05D005098 ORTHO05D006646 3.1e-128 462.2 296 79.1
EL10Ac8g20363 Beta vulgaris HOM05D005098 ORTHO05D006646 7.0e-128 461.1 296 78.4
SalBow3G0169 Salvia bowleyana HOM05D005098 ORTHO05D006646 7.0e-128 461.1 323 72.8
PSO832G2562 Papaver somniferum HOM05D005098 ORTHO05D006646 9.1e-128 460.7 296 78.0
ECA234G2003 Erigeron canadensis HOM05D005098 ORTHO05D006646 1.2e-127 460.3 297 76.8
Medtr3g072660 Medicago truncatula HOM05D005098 ORTHO05D006646 2.0e-127 459.5 297 76.8
Glyma.07G195500 Glycine max HOM05D005098 ORTHO05D006646 2.7e-127 459.1 296 77.4
Medtr4g088935 Medicago truncatula HOM05D005098 ORTHO05D006646 4.5e-127 458.4 296 76.4
Hund21233 Selenicereus undatus HOM05D005098 ORTHO05D006646 4.5e-127 458.4 323 73.4
PSO210G7403 Papaver somniferum HOM05D005098 ORTHO05D006646 5.9e-127 458.0 296 77.7
Potri.004G041600 Populus trichocarpa HOM05D005098 ORTHO05D006646 1.0e-126 457.2 296 77.4
HPP92_021892 Vanilla planifolia HOM05D005098 ORTHO05D006646 1.7e-126 456.4 296 75.3
TPR.G12033 Trifolium pratense HOM05D005098 ORTHO05D006646 2.3e-126 456.1 296 76.7
BolC1t02496H Brassica oleracea HOM05D005098 ORTHO05D006646 3.8e-126 455.3 302 76.2
BcaC09g50435 Brassica carinata HOM05D005098 ORTHO05D006646 5.0e-126 454.9 302 76.2
PGR142G2026 Punica granatum HOM05D005098 ORTHO05D006646 5.0e-126 454.9 296 75.3
BraA01t01956Z Brassica rapa HOM05D005098 ORTHO05D006646 1.1e-125 453.8 301 75.4
A01p20290 Brassica napus HOM05D005098 ORTHO05D006646 3.3e-125 452.2 301 75.1
Glyma.13G180800 Glycine max HOM05D005098 ORTHO05D006646 9.5e-125 450.7 296 76.7
Carub.0007s2440 Capsella rubella HOM05D005098 ORTHO05D006646 1.4e-123 446.8 301 74.8
C01p25440 Brassica napus HOM05D005098 ORTHO05D006646 4.4e-122 441.8 326 70.6
unitig_736.g22566 Utricularia gibba HOM05D005098 ORTHO05D006646 2.8e-121 439.1 328 69.5
Nitab4.5_0005954g0050 Nicotiana tabacum HOM05D005098 ORTHO05D006646 6.3e-121 438.0 297 76.1
Os04g0680000 Oryza sativa ssp. japonica HOM05D005098 ORTHO05D006646 1.1e-120 437.2 296 72.0
Nitab4.5_0002158g0040 Nicotiana tabacum HOM05D005098 ORTHO05D006646 3.2e-120 435.6 297 75.8
MBI18_g17000_MAGBIO Magnolia biondii HOM05D005098 ORTHO05D006646 7.8e-119 431.0 296 72.6
ATR0680G123 Amborella trichopoda HOM05D005098 ORTHO05D006646 1.7e-118 429.9 314 67.8
Thecc.06G189900 Theobroma cacao HOM05D005098 ORTHO05D006646 3.3e-117 425.6 257 81.7
Cpa.g.sc27.58 Carica papaya HOM05D005098 ORTHO05D006646 1.6e-116 423.3 297 74.4
vmacro15900 Vaccinium macrocarpon HOM05D005098 ORTHO05D006646 1.6e-116 423.3 271 79.3
FAN21G0237 Fragaria x ananassa HOM05D005098 ORTHO05D006646 2.8e-116 422.5 375 60.3
SGA_v2.0_scaffold111G31518 Striga asiatica HOM05D005098 ORTHO05D006646 2.8e-116 422.5 316 71.2
COL.COLO4_32259 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.0e-115 420.6 268 78.4
Zm00001eb065950 Zea mays HOM05D005098 ORTHO05D006646 3.7e-113 412.1 296 68.6
Sabra04G0025700 Salix brachista HOM05D005098 ORTHO05D006646 5.4e-112 408.3 268 76.1
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.2e-111 407.1 259 78.0
FAN11G1498 Fragaria x ananassa HOM05D005098 ORTHO05D006646 1.9e-109 399.8 355 60.3
Nitab4.5_0000119g0020 Nicotiana tabacum HOM05D005098 ORTHO05D006646 1.1e-107 394.0 296 69.3
AUR62014801 Chenopodium quinoa HOM05D005098 ORTHO05D006646 8.9e-107 391.0 258 74.8
Ah.09g237250 Amaranthus hybridus HOM05D005098 ORTHO05D006646 4.9e-105 385.2 246 77.2
DCAR_028090 Daucus carota HOM05D005098 ORTHO05D006646 1.2e-100 370.5 246 76.0
GSVIVG01002931001 Vitis vinifera HOM05D005098 ORTHO05D006646 4.9e-97 358.6 205 85.4
AUR62016992 Chenopodium quinoa HOM05D005098 ORTHO05D006646 1.6e-95 353.6 261 70.5
Duzib192G0974 Durio zibethinus HOM05D005098 ORTHO05D006646 2.6e-90 336.3 296 61.8
Aqoxy3G01806 Aquilegia oxysepala HOM05D005098 ORTHO05D006646 1.3e-89 334.0 202 82.7
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 4.6e-87 325.5 298 59.7
Mapoly0047s0044 Marchantia polymorpha HOM05D005098 ORTHO05D006646 2.3e-86 323.2 295 53.2
SHI01874 Sapria himalayana HOM05D005098 ORTHO05D006646 1.9e-85 320.1 331 54.4
Pp3c3_5470 Physcomitrium patens HOM05D005098 ORTHO05D006646 1.9e-77 293.5 295 50.2
Gohir.D10G025400 Gossypium hirsutum HOM05D005098 ORTHO05D006646 4.3e-77 292.4 183 78.1
FAN16G1787 Fragaria x ananassa HOM05D005098 ORTHO05D006646 1.1e-69 267.7 186 71.0
PGSC0003DMG400022441 Solanum tuberosum HOM05D005098 ORTHO05D006646 3.1e-67 259.6 148 85.1
SMO271G0092 Selaginella moellendorffii HOM05D005098 ORTHO05D006646 5.3e-67 258.8 306 43.5
CBR_g44575 Chara braunii HOM05D005098 ORTHO05D006646 8.2e-60 235.0 288 43.8
CBR_g45762 Chara braunii HOM05D005098 ORTHO05D006646 9.0e-59 231.5 287 42.9
Rhsim02G0128000 Rhododendron simsii HOM05D005098 ORTHO05D006646 6.5e-57 225.3 155 76.1
arahy.Tifrunner.gnm1.ann1.MC3R28 Arachis hypogaea HOM05D005098 ORTHO05D006646 1.4e-48 197.6 266 45.5
Haze_06488 Corylus avellana HOM05D005098 ORTHO05D006646 1.7e-44 184.1 296 41.6
SEGI_32979 Sequoiadendron giganteum HOM05D005098 ORTHO05D006646 6.5e-33 145.6 118 61.9
GSVIVG01002018001 Vitis vinifera HOM05D005098 ORTHO05D006646 4.7e-31 139.4 79 87.3
FAN16G0038 Fragaria x ananassa HOM05D005098 ORTHO05D006646 5.2e-30 136.0 93 71.0
MELO3C007290.2 Cucumis melo HOM05D005098 ORTHO05D006646 4.4e-29 132.9 80 83.8
Cfa026287 Carpinus fangiana HOM05D003704 ORTHO05D005892 1.2e-26 124.8 292 31.2
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 7.7e-26 122.1 70 85.7
MCO15G365 Micromonas commoda HOM05D005098 ORTHO05D006646 2.2e-25 120.6 306 28.8
PRCOL_00001787 Prasinoderma coloniale HOM05D005098 ORTHO05D006646 1.5e-24 117.9 348 28.4
Gohir.D06G130832 Gossypium hirsutum HOM05D005098 ORTHO05D004556 2.5e-24 117.1 69 82.6
Gohir.D09G038350 Gossypium hirsutum HOM05D005098 ORTHO05D006646 3.2e-24 116.7 69 82.6
Ca_18535_v3 Cicer arietinum L. HOM05D005098 ORTHO05D006646 8.3e-20 102.1 118 49.2
SEGI_13032 Sequoiadendron giganteum HOM05D005098 ORTHO05D006646 2.4e-19 100.5 81 61.7
Cc01_g06850 Coffea canephora HOM05D005098 ORTHO05D006646 4.2e-16 89.7 80 63.8
Aqoxy3G01796 Aquilegia oxysepala HOM05D005098 ORTHO05D031290 1.2e-15 88.2 57 73.7
AagrBONN_evm.TU.Sc2ySwM_117.270 Anthoceros agrestis HOM05D005098 ORTHO05D006646 1.0e-14 85.1 68 57.4
Rhsim06G0079100 Rhododendron simsii HOM05D005098 ORTHO05D006646 1.8e-14 84.3 52 76.9
Gohir.A04G102400 Gossypium hirsutum HOM05D005098 ORTHO05D006646 2.3e-14 84.0 51 80.4
SEGI_03475 Sequoiadendron giganteum HOM05D005098 ORTHO05D006646 7.5e-13 79.0 58 63.8
Glyma.13G152508 Glycine max HOM05D005098 ORTHO05D046693 4.1e-11 73.2 36 91.7
FAN08G2831 Fragaria x ananassa HOM05D005098 ORTHO05D031290 2.0e-10 70.9 69 56.5
Cre09.g403300 Chlamydomonas reinhardtii HOM05D005098 ORTHO05D006646 2.3e-09 67.4 221 26.7
FvH4_5g20991 Fragaria vesca HOM05D005098 ORTHO05D031290 1.5e-08 64.7 88 44.3
SEGI_28984 Sequoiadendron giganteum HOM05D005098 ORTHO05D006646 2.1e-07 60.8 38 71.1
Gohir.D13G133800 Gossypium hirsutum HOM05D003836 ORTHO05D004556 2.3e-06 57.4 36 77.8
Gohir.D10G060133 Gossypium hirsutum HOM05D005098 ORTHO05D006646 8.9e-06 55.5 35 77.1


User provided reference genes

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