Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07219 Davidia involucrata HOM05D005358 ORTHO05D006384 1.6e-144 516.2 270 100.0
CSS0029272 Camellia sinensis var. sinensis HOM05D005358 ORTHO05D006384 1.1e-121 440.3 270 85.9
CSS0039743 Camellia sinensis var. sinensis HOM05D005358 ORTHO05D006384 9.3e-121 437.2 270 85.6
GSVIVG01008866001 Vitis vinifera HOM05D005358 ORTHO05D006384 1.1e-116 423.7 271 83.4
CSS0043679 Camellia sinensis var. sinensis HOM05D005358 ORTHO05D006384 1.5e-115 419.9 270 82.2
QL09p034583 Quercus lobata HOM05D005358 ORTHO05D006384 4.4e-115 418.3 270 83.0
MD15G1348200 Malus domestica HOM05D005358 ORTHO05D006384 7.6e-115 417.5 278 82.4
Nn5g28290 Nelumbo nucifera HOM05D005358 ORTHO05D006384 1.3e-114 416.8 275 79.6
CiPaw.05G221300 Carya illinoinensis HOM05D005358 ORTHO05D006384 6.4e-114 414.5 275 82.5
Sabra02G0065500 Salix brachista HOM05D005358 ORTHO05D006384 3.2e-113 412.1 274 81.0
MD08G1162600 Malus domestica HOM05D005358 ORTHO05D006384 1.0e-111 407.1 280 80.7
CAN.G1040.10 Capsicum annuum HOM05D005358 ORTHO05D006384 1.3e-111 406.8 283 78.8
Cfa016019 Carpinus fangiana HOM05D005358 ORTHO05D006384 3.0e-111 405.6 279 81.0
Prupe.1G497100 Prunus persica HOM05D005358 ORTHO05D006384 3.0e-111 405.6 281 80.8
HanXRQChr02g0053151 Helianthus annuus HOM05D005358 ORTHO05D006384 3.9e-111 405.2 273 82.1
DCAR_003551 Daucus carota HOM05D005358 ORTHO05D006384 5.1e-111 404.8 275 80.7
Gohir.D01G180400 Gossypium hirsutum HOM05D005358 ORTHO05D006384 1.1e-110 403.7 279 79.2
Gorai.002G222200 Gossypium raimondii HOM05D005358 ORTHO05D006384 1.1e-110 403.7 279 79.2
Gohir.A01G189100 Gossypium hirsutum HOM05D005358 ORTHO05D006384 1.9e-110 402.9 279 79.2
PSO528G0145 Papaver somniferum HOM05D005358 ORTHO05D006384 1.9e-110 402.9 275 79.3
CiPaw.06G031000 Carya illinoinensis HOM05D005358 ORTHO05D006384 3.3e-110 402.1 267 81.3
Potri.002G083500 Populus trichocarpa HOM05D005358 ORTHO05D006384 4.3e-110 401.7 275 80.0
TAR628G0971 Trochodendron aralioides HOM05D005358 ORTHO05D006384 5.6e-110 401.4 277 79.4
Actinidia03469 Actinidia chinensis HOM05D005358 ORTHO05D006384 9.6e-110 400.6 270 81.9
Duzib093G1131 Durio zibethinus HOM05D005358 ORTHO05D006384 1.4e-108 396.7 277 78.0
Duzib116G0356 Durio zibethinus HOM05D005358 ORTHO05D006384 1.4e-108 396.7 275 76.7
HanXRQChr02g0053161 Helianthus annuus HOM05D005358 ORTHO05D006384 1.8e-108 396.4 271 80.1
Sc01g0006700 Simmondsia chinensis HOM05D005358 ORTHO05D006384 1.8e-108 396.4 273 77.7
FAN20G2528 Fragaria x ananassa HOM05D005358 ORTHO05D006384 2.4e-108 396.0 277 78.7
Gorai.009G245800 Gossypium raimondii HOM05D005358 ORTHO05D006384 2.4e-108 396.0 273 78.0
Lj1g0002097 Lotus japonicus HOM05D005358 ORTHO05D006384 2.4e-108 396.0 276 79.3
FAN27G1910 Fragaria x ananassa HOM05D005358 ORTHO05D006384 3.1e-108 395.6 277 78.3
Solyc06g060340.3 Solanum lycopersicum HOM05D005358 ORTHO05D006384 4.0e-108 395.2 280 77.1
FAN15G1035 Fragaria x ananassa HOM05D005358 ORTHO05D006384 5.3e-108 394.8 277 78.3
Lj7A340T34 Lonicera japonica HOM05D005358 ORTHO05D006384 6.9e-108 394.4 273 79.5
Lju12250A0T27 Lonicera japonica HOM05D005358 ORTHO05D006384 6.9e-108 394.4 273 79.5
Sopen06g020470 Solanum pennellii HOM05D005358 ORTHO05D006384 6.9e-108 394.4 280 76.8
ECA233G3168 Erigeron canadensis HOM05D005358 ORTHO05D006384 1.2e-107 393.7 249 85.9
RcHm_v2.0_Chr6g0295831 Rosa chinensis HOM05D005358 ORTHO05D006384 1.2e-107 393.7 279 77.4
Gohir.D05G237400 Gossypium hirsutum HOM05D005358 ORTHO05D006384 1.5e-107 393.3 273 77.7
MBI16_g07664_MAGBIO Magnolia biondii HOM05D005358 ORTHO05D006384 1.5e-107 393.3 273 77.7
Cc10_g11890 Coffea canephora HOM05D005358 ORTHO05D006384 2.6e-107 392.5 275 77.8
Sabra05G0134400 Salix brachista HOM05D005358 ORTHO05D006384 2.6e-107 392.5 275 78.2
vmacro12532 Vaccinium macrocarpon HOM05D005358 ORTHO05D006384 4.5e-107 391.7 270 78.9
Oeu059439.1 Olea europaea HOM05D005358 ORTHO05D006384 5.8e-107 391.3 273 77.7
Gohir.A05G235100 Gossypium hirsutum HOM05D005358 ORTHO05D006384 7.6e-107 391.0 275 77.5
Lsat_1_v5_gn_6_35480 Lactuca sativa HOM05D005358 ORTHO05D006384 9.9e-107 390.6 272 79.8
Lalb_Chr11g0065911 Lupinus albus HOM05D005358 ORTHO05D006384 9.9e-107 390.6 274 77.0
Thecc.08G125500 Theobroma cacao HOM05D005358 ORTHO05D006384 9.9e-107 390.6 277 76.9
CANSAT25G3496 Cannabis sativa HOM05D005358 ORTHO05D006384 1.3e-106 390.2 277 78.3
Cpa.g.sc64.88 Carica papaya HOM05D005358 ORTHO05D006384 1.3e-106 390.2 274 77.7
COL.COLO4_08077 Corchorus olitorius HOM05D005358 ORTHO05D006384 1.3e-106 390.2 278 75.9
Oeu028563.1 Olea europaea HOM05D005358 ORTHO05D006384 1.3e-106 390.2 273 76.2
PGSC0003DMG400017556 Solanum tuberosum HOM05D005358 ORTHO05D006384 1.7e-106 389.8 280 75.7
Nitab4.5_0000322g0160 Nicotiana tabacum HOM05D005358 ORTHO05D006384 2.9e-106 389.0 279 76.3
Migut.C01123 Erythranthe guttata HOM05D005358 ORTHO05D006384 3.8e-106 388.7 272 76.1
FAN24G1660 Fragaria x ananassa HOM05D005358 ORTHO05D006384 4.9e-106 388.3 277 77.6
PSO170G3857 Papaver somniferum HOM05D005358 ORTHO05D006384 4.9e-106 388.3 274 76.3
arahy.Tifrunner.gnm1.ann1.L9FPHH Arachis hypogaea HOM05D005358 ORTHO05D006384 1.1e-105 387.1 274 77.7
THA.LOC104817350 Tarenaya hassleriana HOM05D005358 ORTHO05D006384 1.1e-105 387.1 275 76.7
TWI34G1827 Tripterygium wilfordii HOM05D005358 ORTHO05D006384 2.4e-105 386.0 276 76.8
Aqoxy6G00218 Aquilegia oxysepala HOM05D005358 ORTHO05D006384 5.4e-105 384.8 272 75.4
PGR042G4000 Punica granatum HOM05D005358 ORTHO05D006384 9.3e-105 384.0 281 76.5
Atru.chr13.1462 Acer truncatum HOM05D005358 ORTHO05D006384 2.1e-104 382.9 278 77.3
Atru.chr13.1484 Acer truncatum HOM05D005358 ORTHO05D006384 2.1e-104 382.9 278 77.3
Sed0008649 Sechium edule HOM05D005358 ORTHO05D006384 2.7e-104 382.5 274 76.6
Ciclev10002099m.g Citrus clementina HOM05D005358 ORTHO05D006384 3.5e-104 382.1 281 75.8
Medtr3g088040 Medicago truncatula HOM05D005358 ORTHO05D006384 3.5e-104 382.1 277 78.0
TAR376G0195 Trochodendron aralioides HOM05D005358 ORTHO05D006384 1.0e-103 380.6 275 77.1
Glyma.04G249700 Glycine max HOM05D005358 ORTHO05D006384 1.8e-103 379.8 278 77.3
Psat5g087360 Pisum sativum HOM05D005358 ORTHO05D006384 1.8e-103 379.8 274 76.6
ATR0584G037 Amborella trichopoda HOM05D005358 ORTHO05D006384 2.3e-103 379.4 269 75.5
Rhsim06G0103300 Rhododendron simsii HOM05D005358 ORTHO05D006384 3.9e-103 378.6 272 77.2
CsaV3_6G034480 Cucumis sativus L. HOM05D005358 ORTHO05D006384 6.7e-103 377.9 272 76.5
MELO3C010608.2 Cucumis melo HOM05D005358 ORTHO05D006384 8.7e-103 377.5 272 76.5
MSTRG.22407 Avicennia marina HOM05D005358 ORTHO05D006384 1.1e-102 377.1 274 76.3
Glyma.06G113200 Glycine max HOM05D005358 ORTHO05D006384 1.9e-102 376.3 278 77.3
Aa31LG6G9330 Aethionema arabicum HOM05D005358 ORTHO05D006384 3.3e-102 375.6 275 76.4
Carub.0001s3521 Capsella rubella HOM05D005358 ORTHO05D006384 9.6e-102 374.0 273 75.8
ClCG08G005640 Citrullus lanatus HOM05D005358 ORTHO05D006384 9.6e-102 374.0 276 75.0
SalBow6G1113 Salvia bowleyana HOM05D005358 ORTHO05D006384 2.8e-101 372.5 274 76.3
Migut.N03279 Erythranthe guttata HOM05D005358 ORTHO05D006384 4.8e-101 371.7 273 74.0
SGA_v2.0_scaffold25G11130 Striga asiatica HOM05D005358 ORTHO05D006384 4.8e-101 371.7 252 79.4
BcaB07g33947 Brassica carinata HOM05D005358 ORTHO05D006384 6.2e-101 371.3 278 73.4
Os01g0869800 Oryza sativa ssp. japonica HOM05D005358 ORTHO05D006384 6.2e-101 371.3 273 75.8
VMungo1309G1077 Vigna mungo HOM05D005358 ORTHO05D006384 8.1e-101 370.9 271 77.5
BcaC08g42851 Brassica carinata HOM05D005358 ORTHO05D006384 1.1e-100 370.5 276 73.9
A10p07510 Brassica napus HOM05D005358 ORTHO05D006384 1.1e-100 370.5 276 73.9
C06p00660 Brassica napus HOM05D005358 ORTHO05D006384 1.1e-100 370.5 276 73.9
Eucgr.F03789 Eucalyptus grandis HOM05D005358 ORTHO05D006384 1.1e-100 370.5 274 76.3
BraSC36t46054Z Brassica rapa HOM05D005358 ORTHO05D006384 1.4e-100 370.2 274 74.1
TPR.G21057 Trifolium pratense HOM05D005358 ORTHO05D006384 1.4e-100 370.2 272 74.3
arahy.Tifrunner.gnm1.ann1.QP7RRL Arachis hypogaea HOM05D005358 ORTHO05D006384 1.8e-100 369.8 274 75.5
CARHR035950 Cardamine hirsuta HOM05D005358 ORTHO05D006384 1.8e-100 369.8 271 74.5
Sp1g33560 Schrenkiella parvula HOM05D005358 ORTHO05D006384 1.8e-100 369.8 271 75.3
AT1G44575 Arabidopsis thaliana HOM05D005358 ORTHO05D006384 2.4e-100 369.4 274 74.5
BcaB04g17587 Brassica carinata HOM05D005358 ORTHO05D006384 2.4e-100 369.4 271 75.3
BolC6t35202H Brassica oleracea HOM05D005358 ORTHO05D006384 3.1e-100 369.0 276 73.9
BcaC07g37296 Brassica carinata HOM05D005358 ORTHO05D006384 1.2e-99 367.1 271 74.9
BolC8t47572H Brassica oleracea HOM05D005358 ORTHO05D006384 1.2e-99 367.1 271 74.9
CDE02G0325 Ceratophyllum demersum HOM05D005358 ORTHO05D006384 1.5e-99 366.7 274 73.7
unitig_46.g18102 Utricularia gibba HOM05D005358 ORTHO05D006384 1.5e-99 366.7 271 74.5
A08p06370 Brassica napus HOM05D005358 ORTHO05D006384 2.6e-99 365.9 271 74.9
BraA08t32644Z Brassica rapa HOM05D005358 ORTHO05D006384 2.6e-99 365.9 271 74.9
C08p07310 Brassica napus HOM05D005358 ORTHO05D006384 5.8e-99 364.8 271 74.5
Phvul.009G125100 Phaseolus vulgaris HOM05D005358 ORTHO05D006384 7.6e-99 364.4 274 74.8
FvH4_2g26970 Fragaria vesca HOM05D005358 ORTHO05D006384 1.0e-98 364.0 235 83.0
Nitab4.5_0004044g0020 Nicotiana tabacum HOM05D005358 ORTHO05D006384 2.2e-98 362.8 278 71.9
AL1G52370 Arabidopsis lyrata HOM05D005358 ORTHO05D006384 4.9e-98 361.7 270 74.1
Thhalv10011718m.g Eutrema salsugineum HOM05D005358 ORTHO05D006384 4.2e-97 358.6 271 73.1
HPP92_025043 Vanilla planifolia HOM05D005358 ORTHO05D006384 9.3e-97 357.5 270 73.3
Peaxi162Scf00051g00910 Petunia axillaris HOM05D005358 ORTHO05D006384 1.2e-96 357.1 275 72.0
Hund26809 Selenicereus undatus HOM05D005358 ORTHO05D006384 3.5e-96 355.5 278 72.3
SEGI_26351 Sequoiadendron giganteum HOM05D005358 ORTHO05D006384 2.3e-95 352.8 288 69.4
Os04g0690800 Oryza sativa ssp. japonica HOM05D005358 ORTHO05D006384 7.4e-94 347.8 218 83.5
AUR62019079 Chenopodium quinoa HOM05D005358 ORTHO05D006384 2.1e-93 346.3 197 86.8
Zm00001eb146510 Zea mays HOM05D005358 ORTHO05D006384 2.7e-88 329.3 193 83.9
Pp3c20_23430 Physcomitrium patens HOM05D005358 ORTHO05D006384 7.4e-86 321.2 222 75.2
SMO146G0179 Selaginella moellendorffii HOM05D005358 ORTHO05D006384 5.3e-84 315.1 196 79.6
Mapoly0013s0199 Marchantia polymorpha HOM05D005358 ORTHO05D006384 2.0e-83 313.2 290 62.8
CDE08G0239 Ceratophyllum demersum HOM05D005358 ORTHO05D006384 1.0e-79 300.8 238 71.8
Dinv27311 Davidia involucrata HOM05D005358 ORTHO05D006384 1.0e-79 300.8 192 85.9
AagrBONN_evm.TU.Sc2ySwM_368.1869 Anthoceros agrestis HOM05D005358 ORTHO05D006384 2.3e-79 299.7 227 69.6
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 2.6e-75 286.2 169 84.0
Manes.18G077312 Manihot esculenta HOM05D005358 ORTHO05D006384 7.7e-67 258.1 194 75.8
Haze_00439 Corylus avellana HOM05D005358 ORTHO05D006384 4.2e-65 252.3 163 82.8
Ca_16558_v3 Cicer arietinum L. HOM05D005358 ORTHO05D006384 6.1e-64 248.4 198 71.2
Ah.05g171100 Amaranthus hybridus HOM05D005358 ORTHO05D006384 5.7e-62 241.9 134 91.0
CBR_g29877 Chara braunii HOM05D005358 ORTHO05D006384 1.1e-60 237.7 161 73.9
CBR_g40031 Chara braunii HOM05D005358 ORTHO05D006384 1.3e-53 214.2 163 65.0
EL10Ac1g01011 Beta vulgaris HOM05D005358 ORTHO05D006384 2.7e-51 206.5 272 51.5
Actinidia29466 Actinidia chinensis HOM05D005358 ORTHO05D006384 2.2e-45 186.8 151 75.5
Glyma.13G078900 Glycine max HOM05D004548 ORTHO05D005402 3.5e-43 179.5 230 52.2
CDE06G0290 Ceratophyllum demersum HOM05D005358 ORTHO05D006384 2.3e-42 176.8 121 74.4
EL10Ac5g12375 Beta vulgaris HOM05D005358 ORTHO05D006384 2.2e-37 160.2 96 82.3
Cre01.g016600 Chlamydomonas reinhardtii HOM05D005358 ORTHO05D006384 3.5e-35 152.9 190 47.9
Cre01.g016750 Chlamydomonas reinhardtii HOM05D005358 ORTHO05D006384 2.3e-34 150.2 233 43.3
FAN08G1189 Fragaria x ananassa HOM05D005358 ORTHO05D006384 6.4e-21 105.5 80 75.0
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 1.3e-18 97.8 114 58.8
Cre03.g146147 Chlamydomonas reinhardtii HOM05D005358 ORTHO05D006384 4.6e-11 72.8 173 33.5
PRCOL_00001561 Prasinoderma coloniale HOM05D005358 ORTHO05D006384 1.3e-10 71.2 175 31.4
MELO3C030542.2 Cucumis melo HOM05D005358 ORTHO05D006384 8.1e-08 62.0 35 82.9
MCO14G314 Micromonas commoda HOM05D005358 ORTHO05D006384 6.8e-07 58.9 60 46.7
MELO3C031367.2 Cucumis melo HOM05D005358 ORTHO05D006384 2.6e-06 57.0 81 46.9


User provided reference genes

Program Settings