Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05783 Davidia involucrata HOM05D002281 ORTHO05D006774 0.0e+00 1425.6 769 100.0
Actinidia06827 Actinidia chinensis HOM05D002281 ORTHO05D006774 0.0e+00 1253.8 852 79.3
GSVIVG01026351001 Vitis vinifera HOM05D002281 ORTHO05D006774 0.0e+00 1241.9 846 75.7
CSS0040843 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 0.0e+00 1241.1 829 78.8
Nn3g19861 Nelumbo nucifera HOM05D002281 ORTHO05D006774 0.0e+00 1222.2 826 77.4
MSTRG.27429 Avicennia marina HOM05D002281 ORTHO05D006774 0.0e+00 1212.2 824 77.8
Sopen04g021370 Solanum pennellii HOM05D002281 ORTHO05D006774 0.0e+00 1204.1 855 77.2
Manes.09G145600 Manihot esculenta HOM05D002281 ORTHO05D006774 0.0e+00 1201.8 832 76.7
Nitab4.5_0006530g0020 Nicotiana tabacum HOM05D002281 ORTHO05D006774 0.0e+00 1201.4 840 77.7
Solyc04g050540.4 Solanum lycopersicum HOM05D002281 ORTHO05D006774 0.0e+00 1200.7 855 77.0
Nitab4.5_0001498g0040 Nicotiana tabacum HOM05D002281 ORTHO05D006774 0.0e+00 1199.5 836 77.6
Oeu001246.1 Olea europaea HOM05D002281 ORTHO05D006774 0.0e+00 1196.8 823 75.0
CAN.G131.14 Capsicum annuum HOM05D002281 ORTHO05D006774 0.0e+00 1195.3 852 76.2
Eucgr.B02168 Eucalyptus grandis HOM05D002281 ORTHO05D006774 0.0e+00 1187.2 824 75.2
Lj2C48G13 Lonicera japonica HOM05D002281 ORTHO05D006774 0.0e+00 1185.6 820 77.6
PGR142G3453 Punica granatum HOM05D002281 ORTHO05D006774 0.0e+00 1185.2 829 76.7
FvH4_6g01350 Fragaria vesca HOM05D002281 ORTHO05D006774 0.0e+00 1181.0 842 75.1
RcHm_v2.0_Chr3g0448921 Rosa chinensis HOM05D002281 ORTHO05D006774 0.0e+00 1175.6 839 74.3
Cfa006305 Carpinus fangiana HOM05D002281 ORTHO05D006774 0.0e+00 1172.9 846 74.5
Gohir.A13G103100 Gossypium hirsutum HOM05D002281 ORTHO05D006774 0.0e+00 1172.5 826 75.1
Thecc.05G264900 Theobroma cacao HOM05D002281 ORTHO05D006774 0.0e+00 1171.8 825 75.5
Migut.F02048 Erythranthe guttata HOM05D002281 ORTHO05D006774 0.0e+00 1170.6 827 75.7
SGA_v2.0_scaffold62G21474 Striga asiatica HOM05D002281 ORTHO05D006774 0.0e+00 1170.2 822 73.1
Gohir.D13G106200 Gossypium hirsutum HOM05D002281 ORTHO05D006774 0.0e+00 1167.9 826 74.8
CANSAT54G2391 Cannabis sativa HOM05D002281 ORTHO05D006774 0.0e+00 1166.8 848 73.8
COL.COLO4_38180 Corchorus olitorius HOM05D002281 ORTHO05D006774 0.0e+00 1166.8 812 74.8
Gorai.013G119100 Gossypium raimondii HOM05D002281 ORTHO05D006774 0.0e+00 1164.8 826 74.7
Ciclev10023441m.g Citrus clementina HOM05D002281 ORTHO05D006774 0.0e+00 1164.4 827 75.5
MELO3C010108.2 Cucumis melo HOM05D002281 ORTHO05D006774 0.0e+00 1164.4 837 73.0
Atru.chr2.1137 Acer truncatum HOM05D002281 ORTHO05D006774 0.0e+00 1162.9 831 76.1
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 1160.6 850 74.1
TAR365G0274 Trochodendron aralioides HOM05D002281 ORTHO05D006774 0.0e+00 1160.6 826 74.1
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 1160.2 849 74.1
CsaV3_1G044940 Cucumis sativus L. HOM05D002281 ORTHO05D006774 0.0e+00 1159.1 815 74.6
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 1159.1 850 73.3
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 1158.3 853 73.9
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 0.0e+00 1158.3 848 73.5
Sed0014107 Sechium edule HOM05D002281 ORTHO05D006774 0.0e+00 1157.9 814 74.0
Peaxi162Scf00071g00258 Petunia axillaris HOM05D002281 ORTHO05D006774 0.0e+00 1156.7 834 76.1
TWI60G1049 Tripterygium wilfordii HOM05D002281 ORTHO05D006774 0.0e+00 1156.0 850 73.9
arahy.Tifrunner.gnm1.ann1.BY82ZN Arachis hypogaea HOM05D002281 ORTHO05D006774 0.0e+00 1141.7 834 72.9
Lalb_Chr21g0311311 Lupinus albus HOM05D002281 ORTHO05D006774 0.0e+00 1137.9 828 72.3
THA.LOC104820754 Tarenaya hassleriana HOM05D002281 ORTHO05D006774 0.0e+00 1135.6 833 72.4
Potri.019G025100 Populus trichocarpa HOM05D002281 ORTHO05D006774 0.0e+00 1134.4 853 72.1
PSO063G1810 Papaver somniferum HOM05D002281 ORTHO05D006774 0.0e+00 1133.6 827 73.9
VMungo0720G2591 Vigna mungo HOM05D002281 ORTHO05D006774 0.0e+00 1132.9 825 72.0
Aqoxy2G03815 Aquilegia oxysepala HOM05D002281 ORTHO05D006774 0.0e+00 1132.5 851 70.6
Thhalv10020015m.g Eutrema salsugineum HOM05D002281 ORTHO05D006774 0.0e+00 1132.1 832 70.9
Ca_09982_v3 Cicer arietinum L. HOM05D002281 ORTHO05D006774 0.0e+00 1130.5 854 69.4
MD04G1234900 Malus domestica HOM05D002281 ORTHO05D006774 0.0e+00 1128.6 833 74.1
Carub.0003s0347 Capsella rubella HOM05D002281 ORTHO05D006774 0.0e+00 1125.5 835 70.3
Sp3g03170 Schrenkiella parvula HOM05D002281 ORTHO05D006774 0.0e+00 1124.8 835 69.3
PSO017G1794 Papaver somniferum HOM05D002281 ORTHO05D006774 0.0e+00 1124.4 814 72.7
AL3G14240 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 0.0e+00 1123.2 835 69.9
CARHR078410 Cardamine hirsuta HOM05D002281 ORTHO05D006774 0.0e+00 1121.3 856 68.9
Psat6g141840 Pisum sativum HOM05D002281 ORTHO05D006774 0.0e+00 1119.4 852 70.3
AT3G04260 Arabidopsis thaliana HOM05D002281 ORTHO05D006774 0.0e+00 1118.6 859 68.2
Glyma.20G221100 Glycine max HOM05D002281 ORTHO05D006774 0.0e+00 1113.2 826 72.5
BcaC09g47811 Brassica carinata HOM05D002281 ORTHO05D006774 0.0e+00 1112.1 836 67.8
Medtr1g079525 Medicago truncatula HOM05D002281 ORTHO05D006774 0.0e+00 1112.1 854 69.3
ATR0787G153 Amborella trichopoda HOM05D002281 ORTHO05D006774 0.0e+00 1111.7 844 71.6
Phvul.L002432 Phaseolus vulgaris HOM05D002281 ORTHO05D006774 0.0e+00 1111.3 826 70.9
DCAR_027530 Daucus carota HOM05D002281 ORTHO05D006774 0.0e+00 1109.7 842 70.9
BraA01t04526Z Brassica rapa HOM05D002281 ORTHO05D006774 0.0e+00 1109.0 871 65.8
Glyma.10G168600 Glycine max HOM05D002281 ORTHO05D006774 0.0e+00 1105.9 826 71.5
TPR.G31600 Trifolium pratense HOM05D002281 ORTHO05D006774 0.0e+00 1094.7 820 69.9
Lj5g0010111 Lotus japonicus HOM05D002281 ORTHO05D006774 0.0e+00 1092.4 847 69.2
AUR62006996 Chenopodium quinoa HOM05D002281 ORTHO05D006774 0.0e+00 1088.9 831 71.1
AUR62000641 Chenopodium quinoa HOM05D002281 ORTHO05D006774 0.0e+00 1088.2 820 69.1
Prupe.6G354700 Prunus persica HOM05D002281 ORTHO05D006774 0.0e+00 1081.6 811 70.4
Aa31LG5G14740 Aethionema arabicum HOM05D002281 ORTHO05D006774 0.0e+00 1080.5 841 67.9
HanXRQChr14g0434631 Helianthus annuus HOM05D002281 ORTHO05D006774 0.0e+00 1080.5 815 68.6
Lsat_1_v5_gn_2_16580 Lactuca sativa HOM05D002281 ORTHO05D006774 1.2e-309 1066.2 848 66.5
EL10Ac4g09786 Beta vulgaris HOM05D002281 ORTHO05D006774 3.4e-309 1064.7 855 69.6
BcaNung04817 Brassica carinata HOM05D002281 ORTHO05D006774 7.5e-309 1063.5 835 65.7
unitig_899.g14420 Utricularia gibba HOM05D002281 ORTHO05D006774 1.2e-306 1056.2 824 71.1
ECA238G3638 Erigeron canadensis HOM05D002281 ORTHO05D006774 1.6e-306 1055.8 814 67.1
Hund07166 Selenicereus undatus HOM05D002281 ORTHO05D006774 2.0e-306 1055.4 849 67.1
Sabra19G0034700 Salix brachista HOM05D002281 ORTHO05D006774 3.4e-301 1038.1 834 68.7
arahy.Tifrunner.gnm1.ann1.76MSW2 Arachis hypogaea HOM05D002281 ORTHO05D006774 2.0e-298 1028.9 832 68.4
Os10g0462800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D006774 3.5e-298 1028.1 825 64.4
Zm00001eb046590 Zea mays HOM05D002281 ORTHO05D006774 5.2e-294 1014.2 828 64.3
A01p40910 Brassica napus HOM05D002281 ORTHO05D006774 4.4e-277 958.0 773 63.6
BNapus_Darmor_BZH_scaffold_78p00800 Brassica napus HOM05D002281 ORTHO05D006774 4.4e-277 958.0 773 63.6
HPP92_025553 Vanilla planifolia HOM05D002281 ORTHO05D006774 9.0e-254 880.6 843 59.1
SEGI_16679 Sequoiadendron giganteum HOM05D002281 ORTHO05D006774 1.2e-237 827.0 831 53.7
Sc16g0010030 Simmondsia chinensis HOM05D002281 ORTHO05D006774 2.0e-229 799.7 623 72.1
AagrBONN_evm.TU.Sc2ySwM_368.3437 Anthoceros agrestis HOM05D002281 ORTHO05D006774 8.0e-218 761.1 806 51.9
Hma1.2p1_0123F.1_g058110 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 2.0e-213 746.5 552 72.3
Cc09_g03090 Coffea canephora HOM05D002281 ORTHO05D006774 7.2e-211 738.0 498 76.3
Mapoly0031s0123 Marchantia polymorpha HOM05D002281 ORTHO05D006774 3.0e-209 732.6 816 49.9
CiPaw.07G076800 Carya illinoinensis HOM05D002281 ORTHO05D006774 1.3e-207 727.2 472 77.5
Sabra19G0037700 Salix brachista HOM05D002281 ORTHO05D006774 1.3e-207 727.2 618 67.0
Hma1.2p1_0123F.1_g058100 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 4.9e-183 645.6 519 68.2
Pp3c1_8170 Physcomitrium patens HOM05D002281 ORTHO05D006774 1.8e-177 627.1 805 45.0
ClCG03G011380 Citrullus lanatus HOM05D002281 ORTHO05D006774 6.4e-175 618.6 501 70.5
SMO367G1266 Selaginella moellendorffii HOM05D002281 ORTHO05D006774 3.2e-174 616.3 808 42.2
Haze_04484 Corylus avellana HOM05D002281 ORTHO05D006774 1.8e-161 573.9 568 64.3
CDE02G2074 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 2.1e-157 560.5 482 62.4
vmacro19967 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 2.8e-138 496.9 466 62.2
Cc00_g32050 Coffea canephora HOM05D002281 ORTHO05D006774 4.5e-128 463.0 358 72.1
CBR_g7996 Chara braunii HOM05D002281 ORTHO05D006774 9.3e-126 455.3 829 34.3
Rhsim05G0169000 Rhododendron simsii HOM05D002281 ORTHO05D006774 8.2e-122 442.2 411 60.6
vmacro19969 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 9.7e-107 392.1 237 82.7
Cpa.g.sc51.34 Carica papaya HOM05D002281 ORTHO05D006774 1.1e-102 378.6 218 83.5
Hma1.2p1_0123F.1_g058090 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 2.1e-101 374.4 215 87.0
CDE02G1511 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 4.0e-100 370.2 201 87.6
Actinidia39975 Actinidia chinensis HOM05D002281 ORTHO05D006774 3.7e-98 363.6 196 93.4
Cpa.g.sc51.36 Carica papaya HOM05D002281 ORTHO05D006774 1.6e-93 348.2 302 68.2
Haze_04483 Corylus avellana HOM05D002281 ORTHO05D006774 2.8e-90 337.4 218 77.1
Ah.13g065840 Amaranthus hybridus HOM05D002281 ORTHO05D006774 3.7e-90 337.0 216 81.5
ClCG03G011350 Citrullus lanatus HOM05D002281 ORTHO05D006774 2.9e-87 327.4 214 76.6
CiPaw.07G076900 Carya illinoinensis HOM05D002281 ORTHO05D006774 3.7e-82 310.5 197 78.2
QL03p033056 Quercus lobata HOM05D002281 ORTHO05D006774 5.4e-65 253.4 209 67.0
Hma1.2p1_0463F.1_g158160 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 3.7e-58 230.7 150 76.7
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 7.6e-51 206.5 157 68.2
Actinidia39977 Actinidia chinensis HOM05D002281 ORTHO05D006774 3.2e-49 201.1 144 68.8
AL685U10020 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 1.0e-47 196.1 120 80.8
ClCG03G011370 Citrullus lanatus HOM05D002281 ORTHO05D006774 1.0e-47 196.1 111 84.7
vmacro19968 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 1.7e-47 195.3 113 82.3
QL03p032920 Quercus lobata HOM05D002281 ORTHO05D006774 8.7e-39 166.4 105 81.9
QL03p033074 Quercus lobata HOM05D002281 ORTHO05D006774 4.8e-37 160.6 101 82.2
Cpa.g.sc51.35 Carica papaya HOM05D002281 ORTHO05D006774 3.4e-35 154.5 87 85.1
Sopen01g022760 Solanum pennellii HOM05D002281 ORTHO05D006774 1.6e-32 145.6 147 57.1
Solyc01g016930.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 9.0e-20 103.2 82 68.3
CDE08G0752 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 4.9e-18 97.4 63 76.2
BolC1t05755H Brassica oleracea HOM05D002281 ORTHO05D006774 2.3e-15 88.6 54 79.6
Os10g0460900 Oryza sativa ssp. japonica HOM05D006403 ORTHO05D008130 2.3e-15 88.6 72 61.1
Os10g0461100 Oryza sativa ssp. japonica HOM05D002933 ORTHO05D007742 2.3e-15 88.6 72 61.1
RcHm_v2.0_Chr1g0330901 Rosa chinensis HOM05D002281 ORTHO05D006774 3.9e-15 87.8 62 67.7
Solyc01g014000.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 8.7e-15 86.7 62 67.7
Solyc01g016920.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.1e-14 86.3 53 81.1
CSS0012562 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 2.2e-13 82.0 70 65.7
Solyc01g016870.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.4e-12 79.3 49 81.6
Actinidia39976 Actinidia chinensis HOM05D002281 ORTHO05D006774 5.3e-12 77.4 46 87.0
Cre12.g497350 Chlamydomonas reinhardtii HOM05D002281 ORTHO05D006774 5.0e-10 70.9 230 27.0
Solyc01g013970.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.1e-09 69.7 51 66.7
BraA01t04528Z Brassica rapa HOM05D002281 ORTHO05D006774 4.2e-09 67.8 49 73.5
BolC1t05758H Brassica oleracea HOM05D002281 ORTHO05D006774 9.4e-09 66.6 42 78.6
Solyc01g015200.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.2e-08 66.2 118 37.3
ClCG10G018100 Citrullus lanatus HOM05D006596 ORTHO05D008497 4.6e-08 64.3 200 27.0
Zm00001eb328630 Zea mays HOM05D000001 ORTHO05D000003 1.8e-07 62.4 225 28.0
Carub.0006s1347 Capsella rubella HOM05D006569 ORTHO05D007515 2.0e-06 58.9 368 21.5
Glyma.14G039600 Glycine max HOM05D004783 ORTHO05D005581 2.0e-06 58.9 222 21.6
TPR.G31597 Trifolium pratense HOM05D002281 ORTHO05D006774 3.3e-06 58.2 40 67.5


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