Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05205 Davidia involucrata HOM05D005272 ORTHO05D006890 1.7e-54 215.7 106 100.0
Eucgr.I02388 Eucalyptus grandis HOM05D005272 ORTHO05D006890 3.7e-25 118.2 61 91.8
Eucgr.I02389 Eucalyptus grandis HOM05D005272 ORTHO05D006890 4.9e-25 117.9 61 90.2
Duzib187G0781 Durio zibethinus HOM05D005272 ORTHO05D006890 1.1e-24 116.7 91 67.0
Lj4A210T35 Lonicera japonica HOM05D005272 ORTHO05D006890 2.4e-24 115.5 55 96.4
Duzib187G1472 Durio zibethinus HOM05D005272 ORTHO05D006890 5.4e-24 114.4 55 96.4
MD15G1251700 Malus domestica HOM05D005272 ORTHO05D006890 5.4e-24 114.4 63 84.1
TAR381G0099 Trochodendron aralioides HOM05D005272 ORTHO05D006890 5.4e-24 114.4 60 88.3
Nn1g05787 Nelumbo nucifera HOM05D005272 ORTHO05D006890 7.0e-24 114.0 99 63.6
MSTRG.23263 Avicennia marina HOM05D005272 ORTHO05D006890 9.2e-24 113.6 61 83.6
Hma1.2p1_1114F.1_g258750 Hydrangea macrophylla HOM05D005272 ORTHO05D006890 1.2e-23 113.2 61 88.5
Hma1.2p1_1114F.1_g258760 Hydrangea macrophylla HOM05D005272 ORTHO05D006890 1.2e-23 113.2 61 88.5
Rhsim04G0168600 Rhododendron simsii HOM05D005272 ORTHO05D006890 1.2e-23 113.2 60 86.7
Aqoxy5G01527 Aquilegia oxysepala HOM05D005272 ORTHO05D006890 2.0e-23 112.5 61 83.6
Thecc.01G026600 Theobroma cacao HOM05D005272 ORTHO05D006890 2.0e-23 112.5 60 86.7
Cpa.g.sc6.186 Carica papaya HOM05D005272 ORTHO05D006890 2.7e-23 112.1 55 92.7
Atru.chr3.734 Acer truncatum HOM05D005272 ORTHO05D006890 3.5e-23 111.7 60 85.0
MELO3C016408.2 Cucumis melo HOM05D005272 ORTHO05D006890 3.5e-23 111.7 60 90.0
CsaV3_4G005410 Cucumis sativus L. HOM05D005272 ORTHO05D006890 3.5e-23 111.7 60 90.0
Nitab4.5_0009648g0010 Nicotiana tabacum HOM05D005272 ORTHO05D006890 3.5e-23 111.7 59 86.4
vmacro01069 Vaccinium macrocarpon HOM05D005272 ORTHO05D006890 3.5e-23 111.7 60 85.0
Cc07_g10150 Coffea canephora HOM05D005272 ORTHO05D006890 4.6e-23 111.3 60 85.0
Gorai.011G100400 Gossypium raimondii HOM05D005272 ORTHO05D006890 4.6e-23 111.3 60 85.0
Sopen02g013430 Solanum pennellii HOM05D005272 ORTHO05D006890 4.6e-23 111.3 95 61.1
Gohir.A10G096700 Gossypium hirsutum HOM05D005272 ORTHO05D006890 6.0e-23 110.9 60 85.0
Gohir.D10G091400 Gossypium hirsutum HOM05D005272 ORTHO05D006890 6.0e-23 110.9 60 85.0
Peaxi162Scf01079g00214 Petunia axillaris HOM05D005272 ORTHO05D006890 6.0e-23 110.9 60 83.3
RcHm_v2.0_Chr2g0100131 Rosa chinensis HOM05D005272 ORTHO05D006890 6.0e-23 110.9 63 82.5
VMungo1215G0635 Vigna mungo HOM05D005272 ORTHO05D006890 6.0e-23 110.9 55 90.9
GSVIVG01018859001 Vitis vinifera HOM05D005272 ORTHO05D006890 6.0e-23 110.9 58 91.4
arahy.Tifrunner.gnm1.ann1.4MV4X2 Arachis hypogaea HOM05D005272 ORTHO05D006890 7.8e-23 110.5 60 83.3
arahy.Tifrunner.gnm1.ann1.CVF5QE Arachis hypogaea HOM05D005272 ORTHO05D006890 7.8e-23 110.5 60 83.3
SalBow8G2913 Salvia bowleyana HOM05D005272 ORTHO05D006890 7.8e-23 110.5 60 83.3
CAN.G408.3 Capsicum annuum HOM05D005272 ORTHO05D006890 1.0e-22 110.2 95 63.2
ClCG07G008770 Citrullus lanatus HOM05D005272 ORTHO05D006890 1.0e-22 110.2 60 88.3
Ciclev10025317m.g Citrus clementina HOM05D005272 ORTHO05D006890 1.3e-22 109.8 60 85.0
Phvul.005G099900 Phaseolus vulgaris HOM05D005272 ORTHO05D006890 1.3e-22 109.8 55 89.1
Solyc02g062430.3 Solanum lycopersicum HOM05D005272 ORTHO05D006890 1.3e-22 109.8 55 89.1
FvH4_1g12310 Fragaria vesca HOM05D005272 ORTHO05D006890 1.7e-22 109.4 63 81.0
FAN26G2090 Fragaria x ananassa HOM05D005272 ORTHO05D006890 1.7e-22 109.4 63 81.0
FAN28G0729 Fragaria x ananassa HOM05D005272 ORTHO05D006890 1.7e-22 109.4 63 81.0
Lalb_Chr09g0322041 Lupinus albus HOM05D005272 ORTHO05D006890 1.7e-22 109.4 55 89.1
unitig_899.g14634 Utricularia gibba HOM05D001473 ORTHO05D003900 1.7e-22 109.4 55 87.3
QL06p034856 Quercus lobata HOM05D005272 ORTHO05D006890 2.3e-22 109.0 60 83.3
QL10p007431 Quercus lobata HOM05D005272 ORTHO05D006890 2.3e-22 109.0 60 83.3
CDE07G0649 Ceratophyllum demersum HOM05D005272 ORTHO05D006890 3.0e-22 108.6 61 83.6
Haze_03835 Corylus avellana HOM05D005272 ORTHO05D006890 3.0e-22 108.6 60 85.0
Migut.H02506 Erythranthe guttata HOM05D005272 ORTHO05D006890 5.0e-22 107.8 55 89.1
FAN19G2225 Fragaria x ananassa HOM05D005272 ORTHO05D006890 5.0e-22 107.8 63 79.4
PSO170G5749 Papaver somniferum HOM05D005272 ORTHO05D006890 5.0e-22 107.8 98 61.2
QL06p034836 Quercus lobata HOM05D005272 ORTHO05D006890 5.0e-22 107.8 60 81.7
QL10p007416 Quercus lobata HOM05D005272 ORTHO05D006890 5.0e-22 107.8 60 81.7
TWI60G1562 Tripterygium wilfordii HOM05D005272 ORTHO05D006890 5.0e-22 107.8 60 80.0
Medtr5g021240 Medicago truncatula HOM05D005272 ORTHO05D006890 6.6e-22 107.5 56 85.7
Sed0020582 Sechium edule HOM05D005272 ORTHO05D006890 6.6e-22 107.5 60 85.0
Sc03g0003260 Simmondsia chinensis HOM05D005272 ORTHO05D006890 6.6e-22 107.5 59 86.4
FAN23G1388 Fragaria x ananassa HOM05D005272 ORTHO05D006890 8.6e-22 107.1 63 79.4
MBI04_g26283_MAGBIO Magnolia biondii HOM05D005272 ORTHO05D006890 1.1e-21 106.7 60 83.3
Nitab4.5_0000136g0150 Nicotiana tabacum HOM05D005272 ORTHO05D006890 1.1e-21 106.7 60 81.7
PGR119G0710 Punica granatum HOM05D005272 ORTHO05D006890 1.5e-21 106.3 60 80.0
TPR.G2387 Trifolium pratense HOM05D005272 ORTHO05D006890 1.5e-21 106.3 56 83.9
CANSAT01G2901 Cannabis sativa HOM05D005272 ORTHO05D006890 3.3e-21 105.1 60 78.3
SEGI_27168 Sequoiadendron giganteum HOM05D005272 ORTHO05D006890 3.3e-21 105.1 56 80.4
ATR0665G208 Amborella trichopoda HOM05D005272 ORTHO05D006890 4.3e-21 104.8 56 85.7
Glyma.01G169800 Glycine max HOM05D005272 ORTHO05D006890 5.6e-21 104.4 55 87.3
Lsat_1_v5_gn_2_78121 Lactuca sativa HOM05D005272 ORTHO05D006890 5.6e-21 104.4 55 83.6
A03p64220 Brassica napus HOM05D005272 ORTHO05D006890 7.3e-21 104.0 60 80.0
BraA03t15492Z Brassica rapa HOM05D005272 ORTHO05D006890 7.3e-21 104.0 60 80.0
Ca_24889_v3 Cicer arietinum L. HOM05D005272 ORTHO05D006890 7.3e-21 104.0 60 80.0
Sp7g34060 Schrenkiella parvula HOM05D005272 ORTHO05D006890 7.3e-21 104.0 60 80.0
CARHR244730 Cardamine hirsuta HOM05D005272 ORTHO05D006890 9.5e-21 103.6 63 76.2
Aa31LG6G13200 Aethionema arabicum HOM05D005272 ORTHO05D006890 1.2e-20 103.2 60 81.7
Potri.007G018600 Populus trichocarpa HOM05D005272 ORTHO05D006890 1.2e-20 103.2 56 85.7
C07p61680 Brassica napus HOM05D005272 ORTHO05D006890 1.6e-20 102.8 60 78.3
BolC7t46592H Brassica oleracea HOM05D005272 ORTHO05D006890 1.6e-20 102.8 60 78.3
Hund16459 Selenicereus undatus HOM05D005272 ORTHO05D006890 1.6e-20 102.8 63 74.6
Lj2g0009312 Lotus japonicus HOM05D005272 ORTHO05D006890 2.1e-20 102.4 55 85.5
Carub.0007s0391 Capsella rubella HOM05D005272 ORTHO05D006890 2.8e-20 102.1 60 78.3
Sabra07G0015700 Salix brachista HOM05D005272 ORTHO05D006890 2.8e-20 102.1 61 78.7
Psat0s3355g0080 Pisum sativum HOM05D005272 ORTHO05D006890 3.6e-20 101.7 56 82.1
EL10As8g23880 Beta vulgaris HOM05D005272 ORTHO05D006890 4.7e-20 101.3 60 76.7
CiPaw.07G053400 Carya illinoinensis HOM05D005272 ORTHO05D006890 4.7e-20 101.3 58 82.8
Manes.01G140700 Manihot esculenta HOM05D005272 ORTHO05D006890 4.7e-20 101.3 55 85.5
AUR62004113 Chenopodium quinoa HOM05D005272 ORTHO05D006890 6.2e-20 100.9 60 75.0
AUR62007628 Chenopodium quinoa HOM05D005272 ORTHO05D006890 6.2e-20 100.9 60 75.0
Thhalv10024815m.g Eutrema salsugineum HOM05D005272 ORTHO05D006890 6.2e-20 100.9 60 76.7
AL7G14690 Arabidopsis lyrata HOM05D005272 ORTHO05D006890 8.1e-20 100.5 60 76.7
AT4G36400 Arabidopsis thaliana HOM05D005272 ORTHO05D006890 8.1e-20 100.5 75 68.0
SGA_v2.0_scaffold102G29916 Striga asiatica HOM05D005272 ORTHO05D006890 8.1e-20 100.5 81 64.2
Ah.03g141530 Amaranthus hybridus HOM05D005272 ORTHO05D006890 1.1e-19 100.1 60 75.0
HanXRQChr07g0190391 Helianthus annuus HOM05D005272 ORTHO05D006890 1.1e-19 100.1 55 83.6
HPP92_017497 Vanilla planifolia HOM05D005272 ORTHO05D006890 1.1e-19 100.1 61 73.8
HPP92_017514 Vanilla planifolia HOM05D005272 ORTHO05D006890 1.1e-19 100.1 61 73.8
AagrBONN_evm.TU.Sc2ySwM_344.3428 Anthoceros agrestis HOM05D005272 ORTHO05D006890 2.3e-19 99.0 60 75.0
THA.LOC104807474 Tarenaya hassleriana HOM05D005272 ORTHO05D006890 2.3e-19 99.0 63 73.0
Os07g0187200 Oryza sativa ssp. japonica HOM05D005272 ORTHO05D006890 3.1e-19 98.6 56 82.1
Cfa023942 Carpinus fangiana HOM05D005272 ORTHO05D006890 6.8e-19 97.4 60 73.3
Pp3c26_11820 Physcomitrium patens HOM05D005272 ORTHO05D006890 2.0e-18 95.9 60 70.0
Cre08.g370550 Chlamydomonas reinhardtii HOM05D005272 ORTHO05D006890 5.8e-18 94.4 55 74.5
BcaB01g01720 Brassica carinata HOM05D005272 ORTHO05D006573 7.5e-18 94.0 55 78.2
CBR_g3549 Chara braunii HOM05D005272 ORTHO05D006890 7.5e-18 94.0 60 68.3
arahy.Tifrunner.gnm1.ann1.38E01X Arachis hypogaea HOM05D005272 ORTHO05D006890 9.8e-18 93.6 54 79.6
SMO364G0024 Selaginella moellendorffii HOM05D005272 ORTHO05D006890 9.8e-18 93.6 60 70.0
Glyma.11G073500 Glycine max HOM05D005272 ORTHO05D006890 5.4e-16 87.8 47 85.1
Mapoly0113s0062 Marchantia polymorpha HOM05D005272 ORTHO05D006890 2.7e-15 85.5 58 69.0
PRCOL_00001074 Prasinoderma coloniale HOM05D005272 ORTHO05D006890 6.0e-15 84.3 95 46.3
Zm00001eb302200 Zea mays HOM05D005272 ORTHO05D006890 6.0e-15 84.3 51 74.5
MCO05G403 Micromonas commoda HOM05D005272 ORTHO05D006890 1.0e-14 83.6 55 67.3
Rhsim13G0235800 Rhododendron simsii HOM05D005272 ORTHO05D006890 1.0e-14 83.6 123 41.5
Prupe.7G162700 Prunus persica HOM05D005272 ORTHO05D006890 9.5e-13 77.0 43 81.4
ECA238G0324 Erigeron canadensis HOM05D005272 ORTHO05D006890 2.1e-12 75.9 56 69.6
PGR119G2315 Punica granatum HOM05D005272 ORTHO05D006890 1.1e-11 73.6 39 87.2
Lj7A110T24 Lonicera japonica HOM05D005272 ORTHO05D006890 1.8e-11 72.8 35 94.3
Psat3g045240 Pisum sativum HOM05D005272 ORTHO05D006890 3.4e-10 68.6 34 94.1


User provided reference genes

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