Gene: Solyc02g062430.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc02g062430.3
- Transcript Identifier Solyc02g062430.3.1
- Gene Type Coding gene
- Location SL4.0ch02 : 32031878-32042095 : positive
Gene Family Information
- ID HOM05D005272
- #Genes/#Species 143/97
- Phylogenetic origin
- ID ORTHO05D006890
- #Genes/#Species 137/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc02g062430.3.1
- uniprot A0A3Q7EYP2
- gene_id Solyc02g062430
Descriptions
- Description D-2-hydroxyglutarate dehydrogenase, mitochondrial (AHRD V3.3 *** A0A2G2XBI2_CAPBA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006807 | ISO | PLAZA Integrative Orthology | nitrogen compound metabolic process | AT4G36400 |
| GO:0009853 | ISO | PLAZA Integrative Orthology | photorespiration | AT4G36400 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0050660 | IEA | GOA Database | flavin adenine dinucleotide binding | |
| GO:0050660 | IEA | InterPro | flavin adenine dinucleotide binding | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0071949 | IEA | GOA Database | FAD binding | |
| GO:0051990 | ISO | PLAZA Integrative Orthology | (R)-2-hydroxyglutarate dehydrogenase activity | AT4G36400 |
| GO:0047545 | ISO | PLAZA Integrative Orthology | 2-hydroxyglutarate dehydrogenase activity | AT4G36400 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | IBA | GOA Database | mitochondrion |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004113 | FAD-linked oxidase, C-terminal |
| IPR006094 | FAD linked oxidase, N-terminal |
| IPR016167 | FAD-binding, type PCMH, subdomain 1 |
| IPR016164 | FAD-linked oxidase-like, C-terminal |
| IPR016169 | FAD-binding, type PCMH, subdomain 2 |
| IPR036318 | FAD-binding, type PCMH-like superfamily |
| IPR016171 | Vanillyl-alcohol oxidase, C-terminal subdomain 2 |
| Mapman id | Description |
|---|---|
| 4.2.4.4 | Amino acid metabolism.degradation.lysine.D-2-hydroxyglutarate dehydrogenase |