Gene: Sopen02g013430
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g013430
- Transcript Identifier Sopen02g013430.1
- Gene Type Coding gene
- Location Spenn-ch02 : 36739751-36749690 : positive
Gene Family Information
- ID HOM05D005272
- #Genes/#Species 143/97
- Phylogenetic origin
- ID ORTHO05D006890
- #Genes/#Species 137/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen02g013430.1
Descriptions
- Description Encodes a (D)-2-hydroxyglutarate dehydrogenase. | FAD-linked oxidases family protein | FUNCTIONS IN: electron carrier activity, (R)-2-hydroxyglutarate dehydrogenase activity | INVOLVED IN: biological_process unknown | LOCATED IN: mitochondrion | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 , FAD-linked oxidase, C-terminal , FAD-linked oxidase-like, C-terminal , FAD linked oxidase, N-terminal , FAD-binding, type 2, subdomain 1 | BEST Arabidopsis thaliana protein match is: FAD-linked oxidases family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006807 | ISO | PLAZA Integrative Orthology | nitrogen compound metabolic process | AT4G36400 |
| GO:0009853 | ISO | PLAZA Integrative Orthology | photorespiration | AT4G36400 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0050660 | IEA | InterPro | flavin adenine dinucleotide binding | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0051990 | ISO | PLAZA Integrative Orthology | (R)-2-hydroxyglutarate dehydrogenase activity | AT4G36400 |
| GO:0047545 | ISO | PLAZA Integrative Orthology | 2-hydroxyglutarate dehydrogenase activity | AT4G36400 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT4G36400 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006094 | FAD linked oxidase, N-terminal |
| IPR016167 | FAD-binding, type PCMH, subdomain 1 |
| IPR036318 | FAD-binding, type PCMH-like superfamily |
| IPR016164 | FAD-linked oxidase-like, C-terminal |
| IPR004113 | FAD-linked oxidase, C-terminal |
| IPR016171 | Vanillyl-alcohol oxidase, C-terminal subdomain 2 |
| IPR016169 | FAD-binding, type PCMH, subdomain 2 |
| Mapman id | Description |
|---|---|
| 4.2.4.4 | Amino acid metabolism.degradation.lysine.D-2-hydroxyglutarate dehydrogenase |