Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 0.0e+00 1388.2 685 100.0
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 0.0e+00 1186.0 688 87.1
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 0.0e+00 1145.2 683 83.5
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 0.0e+00 1130.5 686 82.4
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 0.0e+00 1112.4 686 81.3
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 0.0e+00 1100.5 690 79.6
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 0.0e+00 1090.5 687 79.3
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 0.0e+00 1090.1 686 79.9
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 0.0e+00 1082.0 633 82.3
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 0.0e+00 1078.9 687 79.3
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 0.0e+00 1078.9 690 79.0
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 0.0e+00 1075.8 690 78.3
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 9.4e-312 1073.2 689 79.1
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 1.4e-311 1072.4 689 78.4
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 2.3e-311 1071.6 695 78.3
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 4.2e-311 1070.8 691 78.7
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 4.6e-310 1067.4 685 77.7
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 6.0e-310 1067.0 686 78.6
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 2.3e-309 1065.1 686 78.4
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 2.5e-308 1061.6 689 78.2
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 4.1e-306 1054.3 691 77.0
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 2.5e-303 1045.0 694 76.9
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 3.2e-303 1044.6 625 80.5
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 6.1e-302 1040.4 694 76.8
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 8.7e-301 1036.6 688 73.4
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 1.5e-300 1035.8 689 76.5
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 1.9e-300 1035.4 686 75.7
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 3.7e-299 1031.2 641 79.3
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 3.7e-299 1031.2 689 75.8
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 8.2e-299 1030.0 685 75.9
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.1e-298 1029.6 686 75.4
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 5.3e-298 1027.3 687 76.3
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 9.1e-298 1026.5 712 74.2
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 1.2e-297 1026.2 678 76.8
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 1.5e-297 1025.8 696 73.6
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 1.5e-297 1025.8 698 75.1
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 5.9e-297 1023.8 687 75.1
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.3e-296 1022.7 686 75.1
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 1.3e-296 1022.7 698 74.2
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.7e-296 1022.3 688 75.4
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 5.0e-296 1020.8 682 75.4
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 6.5e-296 1020.4 693 74.9
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 1.1e-295 1019.6 666 75.5
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 1.4e-295 1019.2 689 75.2
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 4.2e-295 1017.7 689 75.5
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 7.2e-295 1016.9 695 74.4
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 1.2e-294 1016.1 685 74.0
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 4.7e-294 1014.2 689 73.1
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.9e-293 1011.1 688 74.3
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 3.9e-293 1011.1 686 75.1
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 1.1e-292 1009.6 691 74.4
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 9.1e-290 1000.0 685 73.9
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 1.2e-289 999.6 689 73.0
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 2.0e-289 998.8 691 74.2
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 4.5e-289 997.7 692 74.1
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 7.7e-289 996.9 690 73.9
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 2.7e-286 988.4 688 74.6
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 1.0e-285 986.5 690 72.8
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 1.7e-283 979.2 686 72.0
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 2.9e-280 968.4 704 70.6
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 5.5e-279 964.1 690 71.6
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 7.2e-279 963.8 685 71.7
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 1.8e-277 959.1 690 70.9
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 2.3e-277 958.7 680 71.5
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 8.8e-277 956.8 696 70.5
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 1.2e-276 956.4 682 71.6
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 1.2e-276 956.4 680 71.5
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 1.2e-276 956.4 642 75.1
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 1.5e-276 956.1 684 71.3
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 3.3e-276 954.9 684 71.2
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 9.7e-276 953.4 684 71.1
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 9.7e-276 953.4 692 70.4
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 1.7e-275 952.6 689 70.0
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 3.7e-275 951.4 683 70.9
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 3.7e-275 951.4 680 68.4
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 1.4e-274 949.5 624 73.7
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 1.8e-274 949.1 696 69.7
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 1.8e-274 949.1 683 70.7
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 7.0e-274 947.2 683 68.7
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 1.2e-273 946.4 560 84.1
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 1.7e-272 942.6 672 71.1
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 8.8e-269 930.2 641 74.4
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 3.4e-268 928.3 565 80.9
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 4.1e-266 921.4 562 81.1
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 7.0e-266 920.6 619 72.2
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 1.6e-262 909.4 817 60.0
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 2.1e-262 909.1 681 68.4
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 4.4e-260 901.4 811 61.4
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 1.9e-255 885.9 685 66.4
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 5.6e-255 884.4 560 75.9
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 2.0e-244 849.4 690 65.8
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 7.5e-244 847.4 632 66.5
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 1.7e-235 819.7 554 74.4
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 2.1e-222 776.2 474 82.3
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 4.0e-221 771.9 786 54.5
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 4.9e-211 738.4 619 59.9
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 2.0e-180 636.7 427 73.1
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 2.0e-159 567.0 380 73.9
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 9.1e-149 531.6 430 60.7
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 2.9e-134 483.4 528 50.4
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 5.4e-125 452.6 354 68.4
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 1.1e-120 438.3 549 46.6
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 7.6e-111 405.6 280 72.1
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 1.1e-101 375.2 289 64.4
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.0e-99 367.1 333 59.2
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.0e-99 367.1 333 59.2
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 6.0e-92 342.8 556 37.9
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 2.9e-86 323.9 228 67.1
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 1.6e-84 318.2 237 70.5
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 3.4e-63 247.3 597 31.2
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 1.4e-56 225.3 243 55.1
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 4.1e-56 223.8 252 46.4
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 2.4e-48 198.0 180 56.7
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.2e-44 185.7 147 67.3
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 4.4e-34 150.6 142 55.6
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 1.7e-33 148.7 124 58.1
Actinidia08858 Actinidia chinensis HOM05D006589 ORTHO05D008350 1.7e-09 68.9 80 61.2
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 2.2e-09 68.6 111 37.8
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 2.1e-07 62.0 98 34.7


User provided reference genes

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