Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv04419 Davidia involucrata HOM05D003044 ORTHO05D001869 2.7e-36 154.8 80 100.0
Dinv03806 Davidia involucrata HOM05D003044 ORTHO05D001869 2.3e-11 72.0 45 80.0
GSVIVG01034600001 Vitis vinifera HOM05D003044 ORTHO05D001869 2.0e-10 68.9 45 84.4
Actinidia34738 Actinidia chinensis HOM05D003044 ORTHO05D001869 3.3e-10 68.2 41 80.5
Solyc11g006390.2 Solanum lycopersicum HOM05D003044 ORTHO05D001869 3.3e-10 68.2 50 70.0
Sopen11g002290 Solanum pennellii HOM05D003044 ORTHO05D001869 3.3e-10 68.2 50 70.0
Lj6g0024518 Lotus japonicus HOM05D003044 ORTHO05D001869 1.3e-09 66.2 43 76.7
Medtr1g040610 Medicago truncatula HOM05D003044 ORTHO05D001869 1.3e-09 66.2 43 74.4
TPR.G19799 Trifolium pratense HOM05D003044 ORTHO05D001869 4.8e-09 64.3 45 75.6
Lj2C36T21 Lonicera japonica HOM05D003044 ORTHO05D001869 1.1e-08 63.2 45 75.6
Sopen05g033570 Solanum pennellii HOM05D003044 ORTHO05D001869 1.4e-08 62.8 73 54.8
CAN.G143.56 Capsicum annuum HOM05D003044 ORTHO05D001869 2.4e-08 62.0 42 71.4
Cpa.g.sc33.123 Carica papaya HOM05D003044 ORTHO05D001869 2.4e-08 62.0 47 70.2
VMungo0720G0604 Vigna mungo HOM05D003044 ORTHO05D001869 2.4e-08 62.0 49 71.4
Thecc.10G119700 Theobroma cacao HOM05D003044 ORTHO05D001869 5.3e-08 60.8 45 73.3
Glyma.20G070600 Glycine max HOM05D003044 ORTHO05D001869 9.1e-08 60.1 44 72.7
Gohir.D04G019000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 9.1e-08 60.1 45 73.3
Gorai.012G022500 Gossypium raimondii HOM05D003044 ORTHO05D001869 9.1e-08 60.1 45 73.3
CSS0000792 Camellia sinensis var. sinensis HOM05D003044 ORTHO05D001869 1.2e-07 59.7 44 72.7
Cc02_g09260 Coffea canephora HOM05D003044 ORTHO05D001869 1.2e-07 59.7 51 64.7
Nitab4.5_0005247g0010 Nicotiana tabacum HOM05D003044 ORTHO05D001869 1.6e-07 59.3 75 53.3
VMungo0720G1731 Vigna mungo HOM05D003044 ORTHO05D001869 1.6e-07 59.3 43 72.1
Ca_18140_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 2.0e-07 58.9 43 72.1
Glyma.20G195200 Glycine max HOM05D003044 ORTHO05D001869 2.7e-07 58.5 44 75.0
Lalb_Chr19g0128991 Lupinus albus HOM05D003044 ORTHO05D001869 3.5e-07 58.2 47 66.0
COL.COLO4_32784 Corchorus olitorius HOM05D003044 ORTHO05D001869 4.5e-07 57.8 45 71.1
Duzib106G0590 Durio zibethinus HOM05D003044 ORTHO05D001869 4.5e-07 57.8 45 73.3
Glyma.10G194700 Glycine max HOM05D003044 ORTHO05D001869 4.5e-07 57.8 44 75.0
Hma1.2p1_0098F.1_g048320 Hydrangea macrophylla HOM05D003044 ORTHO05D001869 5.9e-07 57.4 45 68.9
arahy.Tifrunner.gnm1.ann1.JKR5UJ Arachis hypogaea HOM05D003044 ORTHO05D001869 7.7e-07 57.0 37 75.7
DCAR_018987 Daucus carota HOM05D003044 ORTHO05D001869 7.7e-07 57.0 45 71.1
Gohir.A05G396000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 7.7e-07 57.0 45 71.1
Nitab4.5_0000687g0150 Nicotiana tabacum HOM05D003044 ORTHO05D001869 7.7e-07 57.0 75 52.0
Psat6g049400 Pisum sativum HOM05D003044 ORTHO05D001869 7.7e-07 57.0 43 69.8
THA.LOC104823155 Tarenaya hassleriana HOM05D003044 ORTHO05D001869 7.7e-07 57.0 46 65.2
TWI63G0823 Tripterygium wilfordii HOM05D003044 ORTHO05D001869 7.7e-07 57.0 34 76.5
Nn6g34609 Nelumbo nucifera HOM05D003044 ORTHO05D001869 1.0e-06 56.6 46 69.6
Nn6g34615 Nelumbo nucifera HOM05D003044 ORTHO05D001869 1.0e-06 56.6 46 69.6
Nitab4.5_0001781g0070 Nicotiana tabacum HOM05D003044 ORTHO05D001869 1.0e-06 56.6 74 55.4
Glyma.10G120200 Glycine max HOM05D003044 ORTHO05D001869 1.3e-06 56.2 49 63.3
Gohir.D04G018900 Gossypium hirsutum HOM05D003044 ORTHO05D001869 1.3e-06 56.2 49 63.3
Sed0010208 Sechium edule HOM05D003044 ORTHO05D001869 1.3e-06 56.2 42 71.4
THA.LOC104816476 Tarenaya hassleriana HOM05D003044 ORTHO05D001869 1.3e-06 56.2 46 67.4
TPR.G13387 Trifolium pratense HOM05D003044 ORTHO05D001869 1.7e-06 55.8 64 51.6
HanXRQChr07g0194411 Helianthus annuus HOM05D003044 ORTHO05D001869 2.2e-06 55.5 61 54.1
Lalb_Chr02g0150891 Lupinus albus HOM05D003044 ORTHO05D001869 2.2e-06 55.5 43 69.8
Manes.10G059500 Manihot esculenta HOM05D003044 ORTHO05D001869 2.2e-06 55.5 53 60.4
Lsat_1_v5_gn_8_21821 Lactuca sativa HOM05D003044 ORTHO05D001869 3.8e-06 54.7 61 54.1
Lalb_Chr21g0312741 Lupinus albus HOM05D003044 ORTHO05D001869 3.8e-06 54.7 39 71.8
Medtr1g090340 Medicago truncatula HOM05D003044 ORTHO05D001869 3.8e-06 54.7 65 52.3
SGA_v2.0_scaffold90G27707 Striga asiatica HOM05D003044 ORTHO05D001869 3.8e-06 54.7 53 66.0
Ca_10372_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 5.0e-06 54.3 64 50.0
Ca_10422_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 5.0e-06 54.3 64 50.0
CsaV3_6G004440 Cucumis sativus L. HOM05D003044 ORTHO05D001869 5.0e-06 54.3 42 66.7
Gorai.012G022400 Gossypium raimondii HOM05D003044 ORTHO05D001869 5.0e-06 54.3 49 61.2
TWI15G1087 Tripterygium wilfordii HOM05D003044 ORTHO05D001869 5.0e-06 54.3 49 61.2
BraA01t04231Z Brassica rapa HOM05D003044 ORTHO05D001869 6.5e-06 53.9 49 61.2
CiPaw.13G045500 Carya illinoinensis HOM05D003044 ORTHO05D001869 6.5e-06 53.9 48 64.6
MELO3C019915.2 Cucumis melo HOM05D003044 ORTHO05D001869 6.5e-06 53.9 42 66.7


User provided reference genes

Program Settings